RNA–Protein interactions for RNA: YHR012W

VPS29, Transcript of Subunit of the membrane-associated retromer complex, yeastyeast

Gene VPS29, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS29YHR012W RPL11BQ3E757 174 aaPredicted RBP3.51□□□□□ -1.85
VPS29YHR012W YGR240C-AQ3E786 66 aa3.51□□□□□ -1.85
VPS29YHR012W SAL1D6W196 494 aa3.5□□□□□ -1.85
VPS29YHR012W ADH3P07246 375 aaKnown RBP3.5□□□□□ -1.85
VPS29YHR012W MRS1P07266 363 aa3.5□□□□□ -1.85
VPS29YHR012W CDC50P25656 391 aa3.5□□□□□ -1.85
VPS29YHR012W RPL14AP36105 138 aaKnown RBP3.5□□□□□ -1.85
VPS29YHR012W MRPL4P36517 319 aa3.5□□□□□ -1.85
VPS29YHR012W RPL14BP38754 138 aaKnown RBP3.5□□□□□ -1.85
VPS29YHR012W GTT1P40582 234 aa3.5□□□□□ -1.85
VPS29YHR012W NSE4P43124 402 aa3.5□□□□□ -1.85
VPS29YHR012W YGR026WP53217 278 aa3.5□□□□□ -1.85
VPS29YHR012W PAU4P53427 120 aa3.5□□□□□ -1.85
VPS29YHR012W YMR007WQ03675 126 aa3.5□□□□□ -1.85
VPS29YHR012W CRC1Q12289 327 aa3.5□□□□□ -1.85
VPS29YHR012W SME1Q12330 94 aaPredicted RBP3.5□□□□□ -1.85
VPS29YHR012W VAR1P02381 398 aa3.49□□□□□ -1.85
VPS29YHR012W Q0255P03881 472 aa3.49□□□□□ -1.85
VPS29YHR012W PAU1P0CE88 120 aa3.49□□□□□ -1.85
VPS29YHR012W PAU14P0CE89 120 aa3.49□□□□□ -1.85
VPS29YHR012W PAU6P0CE90 120 aa3.49□□□□□ -1.85
VPS29YHR012W PAU18P0CE91 120 aa3.49□□□□□ -1.85
VPS29YHR012W PAU8P0CE92 120 aa3.49□□□□□ -1.85
VPS29YHR012W PAU11P0CE93 120 aa3.49□□□□□ -1.85
VPS29YHR012W SEC59P20048 519 aa3.49□□□□□ -1.85
VPS29YHR012W RPS2P25443 254 aaKnown RBP3.49□□□□□ -1.85
VPS29YHR012W LAC1P28496 418 aa3.49□□□□□ -1.85
VPS29YHR012W PAU13P38725 120 aa3.49□□□□□ -1.85
VPS29YHR012W VMA21P41806 77 aa3.49□□□□□ -1.85
VPS29YHR012W COX16P47081 118 aa3.49□□□□□ -1.85
VPS29YHR012W YDR366CP87287 132 aa3.49□□□□□ -1.85
VPS29YHR012W PAU10Q03050 120 aa3.49□□□□□ -1.85
VPS29YHR012W PAU20Q08322 120 aa3.49□□□□□ -1.85
VPS29YHR012W FIT2Q08906 153 aa3.49□□□□□ -1.85
VPS29YHR012W PAU9Q3E770 120 aa3.49□□□□□ -1.85
VPS29YHR012W HTB2P02294 131 aa3.48□□□□□ -1.85
VPS29YHR012W RPL31BP0C2H9 113 aaKnown RBP3.48□□□□□ -1.85
VPS29YHR012W NTF2P33331 125 aaKnown RBP3.48□□□□□ -1.85
VPS29YHR012W MRPS9P38120 278 aa3.48□□□□□ -1.85
VPS29YHR012W PHS1P40857 217 aa3.48□□□□□ -1.85
VPS29YHR012W CDC40P40968 455 aaPredicted RBP3.48□□□□□ -1.85
VPS29YHR012W DAN1P47178 298 aa3.48□□□□□ -1.85
VPS29YHR012W YDL183CP48569 320 aa3.48□□□□□ -1.85
VPS29YHR012W BNS1P50084 137 aa3.48□□□□□ -1.85
VPS29YHR012W AVO2Q04749 426 aa3.48□□□□□ -1.85
VPS29YHR012W UTP23Q12339 254 aaKnown RBP3.48□□□□□ -1.85
VPS29YHR012W SNU23Q12368 194 aaPredicted RBP3.48□□□□□ -1.85
VPS29YHR012W YLR302CO13544 120 aa3.47□□□□□ -1.85
VPS29YHR012W ANB1P19211 157 aa3.47□□□□□ -1.85
VPS29YHR012W COQ3P27680 312 aa3.47□□□□□ -1.85
VPS29YHR012W ELF1P36053 145 aa3.47□□□□□ -1.85
VPS29YHR012W TRS20P38334 175 aa3.47□□□□□ -1.85
VPS29YHR012W YHR173CP38864 112 aa3.47□□□□□ -1.85
VPS29YHR012W PAU15P40585 124 aa3.47□□□□□ -1.85
VPS29YHR012W DSK2P48510 373 aa3.47□□□□□ -1.85
VPS29YHR012W MGA1P53050 456 aa3.47□□□□□ -1.85
VPS29YHR012W YPS5P53057 165 aa3.47□□□□□ -1.85
VPS29YHR012W YLR118CQ12354 227 aa3.47□□□□□ -1.85
VPS29YHR012W POF1P25576 258 aa3.46□□□□□ -1.86
VPS29YHR012W HMX1P32339 317 aa3.46□□□□□ -1.86
VPS29YHR012W AME1P38313 324 aa3.46□□□□□ -1.86
VPS29YHR012W SPI1P40092 148 aa3.46□□□□□ -1.86
VPS29YHR012W LOC1P43586 204 aaPredicted RBP3.46□□□□□ -1.86
VPS29YHR012W DXO1Q06349 442 aa3.46□□□□□ -1.86
VPS29YHR012W YBR013CP38215 129 aa3.45□□□□□ -1.86
VPS29YHR012W SDH8P38345 138 aa3.45□□□□□ -1.86
VPS29YHR012W YJL028WP47062 111 aa3.45□□□□□ -1.86
VPS29YHR012W YGL185CP53100 379 aa3.45□□□□□ -1.86
VPS29YHR012W TOM7P53507 60 aa3.45□□□□□ -1.86
VPS29YHR012W YPR195CQ06594 109 aa3.45□□□□□ -1.86
VPS29YHR012W DAD1Q12248 94 aa3.45□□□□□ -1.86
VPS29YHR012W YLR342W-AQ3E810 57 aa3.45□□□□□ -1.86
VPS29YHR012W RTC6O14464 93 aa3.44□□□□□ -1.86
VPS29YHR012W RPS22AP0C0W1 130 aaKnown RBP3.44□□□□□ -1.86
VPS29YHR012W NHP6AP11632 93 aaKnown RBP3.44□□□□□ -1.86
VPS29YHR012W RNA15P25299 296 aaPredicted RBP3.44□□□□□ -1.86
VPS29YHR012W YPT10P38146 199 aa3.44□□□□□ -1.86
VPS29YHR012W HSP10P38910 106 aa3.44□□□□□ -1.86
VPS29YHR012W RRT13P40042 185 aa3.44□□□□□ -1.86
VPS29YHR012W BRP1P53194 125 aa3.44□□□□□ -1.86
VPS29YHR012W DAD3P69850 94 aa3.44□□□□□ -1.86
VPS29YHR012W DAD4P69851 72 aa3.44□□□□□ -1.86
VPS29YHR012W UPS3Q04006 179 aa3.44□□□□□ -1.86
VPS29YHR012W YOP1Q12402 180 aa3.44□□□□□ -1.86
VPS29YHR012W YOL085CQ99345 113 aa3.44□□□□□ -1.86
VPS29YHR012W RPL12AP0CX53 165 aaKnown RBP3.43□□□□□ -1.86
VPS29YHR012W RPL12BP0CX54 165 aa3.43□□□□□ -1.86
VPS29YHR012W RPS0AP32905 252 aaKnown RBP3.43□□□□□ -1.86
VPS29YHR012W MRPL28P36527 147 aa3.43□□□□□ -1.86
VPS29YHR012W PAU5P43575 122 aa3.43□□□□□ -1.86
VPS29YHR012W DIA1P54005 336 aa3.43□□□□□ -1.86
VPS29YHR012W ERI1P62651 68 aaKnown RBP3.43□□□□□ -1.86
VPS29YHR012W AIM34Q03673 198 aa3.43□□□□□ -1.86
VPS29YHR012W CMC2Q3E7A4 109 aa3.43□□□□□ -1.86
VPS29YHR012W FMP49A0A023PZB3 126 aa3.42□□□□□ -1.86
VPS29YHR012W PAU19P0CE85 124 aa3.42□□□□□ -1.86
VPS29YHR012W PAU21P0CE86 164 aa3.42□□□□□ -1.86
VPS29YHR012W PAU22P0CE87 164 aa3.42□□□□□ -1.86
VPS29YHR012W PAU3P25610 124 aa3.42□□□□□ -1.86
VPS29YHR012W SUR2P38992 349 aa3.42□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 107 ms