RNA–Protein interactions for RNA: YGR135W

PRE9, Transcript of Alpha 3 subunit of the 20S proteasome, yeastyeast

Gene PRE9, Length 777 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE9YGR135W YGL118CP53132 145 aa3.47□□□□□ -1.85
PRE9YGR135W BRP1P53194 125 aa3.47□□□□□ -1.85
PRE9YGR135W YNR064CP53750 290 aa3.47□□□□□ -1.85
PRE9YGR135W YLR281CQ05863 155 aa3.47□□□□□ -1.85
PRE9YGR135W HRD1Q08109 551 aa3.47□□□□□ -1.85
PRE9YGR135W HNT3Q08702 217 aa3.47□□□□□ -1.85
PRE9YGR135W USB1Q12208 290 aaKnown RBP3.47□□□□□ -1.85
PRE9YGR135W YDL180WQ12301 547 aa3.47□□□□□ -1.85
PRE9YGR135W MPD1Q12404 318 aaKnown RBP3.47□□□□□ -1.85
PRE9YGR135W YLR363W-AQ3E747 85 aa3.47□□□□□ -1.85
PRE9YGR135W CYC3P06182 269 aa3.46□□□□□ -1.86
PRE9YGR135W YKR070WP36151 352 aaKnown RBP3.46□□□□□ -1.86
PRE9YGR135W LSM2P38203 95 aaKnown RBP3.46□□□□□ -1.86
PRE9YGR135W ECM33P38248 429 aaKnown RBP3.46□□□□□ -1.86
PRE9YGR135W YNL200CP40165 246 aaKnown RBP3.46□□□□□ -1.86
PRE9YGR135W YJR015WP47090 510 aa3.46□□□□□ -1.86
PRE9YGR135W SWT21P53873 357 aaPredicted RBP3.46□□□□□ -1.86
PRE9YGR135W DYN2Q02647 92 aa3.46□□□□□ -1.86
PRE9YGR135W RIM9Q04734 239 aa3.46□□□□□ -1.86
PRE9YGR135W SCW10Q04951 389 aa3.46□□□□□ -1.86
PRE9YGR135W GRE1Q08969 168 aa3.46□□□□□ -1.86
PRE9YGR135W FSF1Q12029 327 aaKnown RBP3.46□□□□□ -1.86
PRE9YGR135W YPS3Q12303 508 aa3.46□□□□□ -1.86
PRE9YGR135W RPL27AP0C2H6 136 aaKnown RBP3.45□□□□□ -1.86
PRE9YGR135W RPL27BP0C2H7 136 aaKnown RBP3.45□□□□□ -1.86
PRE9YGR135W YBR121C-AP0C5L4 52 aa3.45□□□□□ -1.86
PRE9YGR135W YMR31P19955 123 aa3.45□□□□□ -1.86
PRE9YGR135W IMP1P28627 190 aa3.45□□□□□ -1.86
PRE9YGR135W YAR068WP39564 161 aa3.45□□□□□ -1.86
PRE9YGR135W PEX22P39718 180 aa3.45□□□□□ -1.86
PRE9YGR135W YNL194CP40169 301 aa3.45□□□□□ -1.86
PRE9YGR135W YIL012WP40551 113 aa3.45□□□□□ -1.86
PRE9YGR135W MIC27P50945 234 aa3.45□□□□□ -1.86
PRE9YGR135W CAB4P53332 305 aa3.45□□□□□ -1.86
PRE9YGR135W VPS71Q03433 280 aa3.45□□□□□ -1.86
PRE9YGR135W ARC18Q05933 178 aaKnown RBP3.45□□□□□ -1.86
PRE9YGR135W CCH1P50077 2039 aa3.44□□□□□ -1.86
PRE9YGR135W YMR316C-AI2HB70 103 aa3.44□□□□□ -1.86
PRE9YGR135W TIR1P10863 254 aa3.44□□□□□ -1.86
PRE9YGR135W ROX3P25046 220 aa3.44□□□□□ -1.86
PRE9YGR135W YCR043CP25361 127 aa3.44□□□□□ -1.86
PRE9YGR135W YBR220CP38318 560 aa3.44□□□□□ -1.86
PRE9YGR135W SEC72P39742 193 aaKnown RBP3.44□□□□□ -1.86
PRE9YGR135W ERG28P40030 148 aa3.44□□□□□ -1.86
PRE9YGR135W TIF34P40217 347 aaKnown RBP3.44□□□□□ -1.86
PRE9YGR135W YIL086CP40503 102 aa3.44□□□□□ -1.86
PRE9YGR135W CIS3P47001 227 aa3.44□□□□□ -1.86
PRE9YGR135W SDS23P53172 527 aa3.44□□□□□ -1.86
PRE9YGR135W POP3P53833 195 aaPredicted RBP3.44□□□□□ -1.86
PRE9YGR135W ATP19P81451 68 aa3.44□□□□□ -1.86
PRE9YGR135W DPP1Q05521 289 aa3.44□□□□□ -1.86
PRE9YGR135W YPR098CQ06089 161 aa3.44□□□□□ -1.86
PRE9YGR135W YIL102C-AQ2V2P5 75 aa3.44□□□□□ -1.86
PRE9YGR135W ADH1P00330 348 aaKnown RBP3.43□□□□□ -1.86
PRE9YGR135W MRS1P07266 363 aa3.43□□□□□ -1.86
PRE9YGR135W YHR173CP38864 112 aa3.43□□□□□ -1.86
PRE9YGR135W SWS2P53937 143 aa3.43□□□□□ -1.86
PRE9YGR135W SUR7P54003 302 aa3.43□□□□□ -1.86
PRE9YGR135W YML079WQ03629 201 aa3.43□□□□□ -1.86
PRE9YGR135W YHP1Q04116 353 aa3.43□□□□□ -1.86
PRE9YGR135W YGL258W-AQ3E740 77 aa3.43□□□□□ -1.86
PRE9YGR135W YKL183C-AQ3E765 70 aa3.43□□□□□ -1.86
PRE9YGR135W Q0144Q9ZZW2 109 aa3.43□□□□□ -1.86
PRE9YGR135W MRPL20P22354 195 aaPredicted RBP3.42□□□□□ -1.86
PRE9YGR135W TOM40P23644 387 aaKnown RBP3.42□□□□□ -1.86
PRE9YGR135W FZF1P32805 299 aa3.42□□□□□ -1.86
PRE9YGR135W YHR138CP38841 114 aaPredicted RBP3.42□□□□□ -1.86
PRE9YGR135W PET8P38921 284 aa3.42□□□□□ -1.86
PRE9YGR135W YJL213WP40896 331 aa3.42□□□□□ -1.86
PRE9YGR135W YJR085CP47131 105 aaKnown RBP3.42□□□□□ -1.86
PRE9YGR135W PGU1P47180 361 aa3.42□□□□□ -1.86
PRE9YGR135W YPS5P53057 165 aa3.42□□□□□ -1.86
PRE9YGR135W DIA1P54005 336 aa3.42□□□□□ -1.86
PRE9YGR135W RAV2Q03956 351 aa3.42□□□□□ -1.86
PRE9YGR135W API2Q04413 109 aa3.42□□□□□ -1.86
PRE9YGR135W UPS1Q05776 175 aa3.42□□□□□ -1.86
PRE9YGR135W FIT2Q08906 153 aa3.42□□□□□ -1.86
PRE9YGR135W YHR214C-DP0CX93 97 aa3.41□□□□□ -1.86
PRE9YGR135W MRPL31P14063 131 aaPredicted RBP3.41□□□□□ -1.86
PRE9YGR135W HSP12P22943 109 aaKnown RBP3.41□□□□□ -1.86
PRE9YGR135W HYP2P23301 157 aaKnown RBP3.41□□□□□ -1.86
PRE9YGR135W ECM14P38836 430 aa3.41□□□□□ -1.86
PRE9YGR135W SNU13P39990 126 aaKnown RBP3.41□□□□□ -1.86
PRE9YGR135W HUA1P40325 198 aa3.41□□□□□ -1.86
PRE9YGR135W YPI1P43587 155 aa3.41□□□□□ -1.86
PRE9YGR135W YLR296WQ05898 108 aa3.41□□□□□ -1.86
PRE9YGR135W WIP1Q2V2P8 89 aa3.41□□□□□ -1.86
PRE9YGR135W YIL046W-AQ3E7Z4 54 aa3.41□□□□□ -1.86
PRE9YGR135W HHF1P02309 103 aaKnown RBP3.4□□□□□ -1.87
PRE9YGR135W FPR2P32472 135 aa3.4□□□□□ -1.87
PRE9YGR135W REE1P40893 198 aa3.4□□□□□ -1.87
PRE9YGR135W EGT2P42835 1041 aa3.4□□□□□ -1.87
PRE9YGR135W YFR057WP43625 151 aa3.4□□□□□ -1.87
PRE9YGR135W TOM7P53507 60 aa3.4□□□□□ -1.87
PRE9YGR135W NRM1P53718 249 aa3.4□□□□□ -1.87
PRE9YGR135W HSK3P69852 69 aa3.4□□□□□ -1.87
PRE9YGR135W YDR391CQ04170 232 aa3.4□□□□□ -1.87
PRE9YGR135W RRS1Q08746 203 aaKnown RBP3.4□□□□□ -1.87
PRE9YGR135W PRM3Q08931 133 aa3.4□□□□□ -1.87
PRE9YGR135W YKL023C-AQ2V2P3 75 aa3.4□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 73 ms