RNA–Protein interactions for RNA: YGR119C

NUP57, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP57, Length 1,626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP57YGR119C BRP1P53194 125 aa5.8□□□□□ -1.48
NUP57YGR119C CWC27Q02770 301 aa5.8□□□□□ -1.48
NUP57YGR119C MRPL31P14063 131 aaPredicted RBP5.79□□□□□ -1.48
NUP57YGR119C SEC11P15367 167 aa5.79□□□□□ -1.48
NUP57YGR119C YNL200CP40165 246 aaKnown RBP5.79□□□□□ -1.48
NUP57YGR119C HAC1P41546 238 aa5.79□□□□□ -1.48
NUP57YGR119C GLO1P50107 326 aa5.79□□□□□ -1.48
NUP57YGR119C FSF1Q12029 327 aaKnown RBP5.79□□□□□ -1.48
NUP57YGR119C RPL23AP0CX41 137 aaKnown RBP5.78□□□□□ -1.48
NUP57YGR119C RPL23BP0CX42 137 aaKnown RBP5.78□□□□□ -1.48
NUP57YGR119C YBR220CP38318 560 aa5.78□□□□□ -1.48
NUP57YGR119C HST4P53688 370 aa5.78□□□□□ -1.48
NUP57YGR119C FYV4P38783 130 aaPredicted RBP5.77□□□□□ -1.48
NUP57YGR119C YER188WP40103 239 aa5.77□□□□□ -1.48
NUP57YGR119C ARC18Q05933 178 aaKnown RBP5.77□□□□□ -1.48
NUP57YGR119C COX2P00410 251 aa5.77□□□□□ -1.49
NUP57YGR119C CYC3P06182 269 aa5.77□□□□□ -1.49
NUP57YGR119C YHL037CP38733 133 aa5.77□□□□□ -1.49
NUP57YGR119C PAU7P39545 55 aa5.77□□□□□ -1.49
NUP57YGR119C MSL1P40567 111 aaPredicted RBP5.77□□□□□ -1.49
NUP57YGR119C YFR045WP43617 309 aa5.77□□□□□ -1.49
NUP57YGR119C YDR366CP87287 132 aa5.77□□□□□ -1.49
NUP57YGR119C SED1Q01589 338 aa5.77□□□□□ -1.49
NUP57YGR119C SDH7Q04401 133 aa5.77□□□□□ -1.49
NUP57YGR119C AYT1Q12226 474 aa5.77□□□□□ -1.49
NUP57YGR119C CRC1Q12289 327 aa5.77□□□□□ -1.49
NUP57YGR119C YFL068WP0CX99 160 aa5.76□□□□□ -1.49
NUP57YGR119C YLL066W-AP0CY00 160 aa5.76□□□□□ -1.49
NUP57YGR119C YLL067W-AP0CY01 160 aa5.76□□□□□ -1.49
NUP57YGR119C MDM10P18409 493 aa5.76□□□□□ -1.49
NUP57YGR119C THG1P53215 237 aaKnown RBP5.76□□□□□ -1.49
NUP57YGR119C WIP1Q2V2P8 89 aa5.76□□□□□ -1.49
NUP57YGR119C SCS22Q6Q595 175 aa5.76□□□□□ -1.49
NUP57YGR119C YKR045CP36138 183 aa5.75□□□□□ -1.49
NUP57YGR119C PRS4P38063 326 aaPredicted RBP5.75□□□□□ -1.49
NUP57YGR119C CTR2P38865 189 aa5.75□□□□□ -1.49
NUP57YGR119C GRH1Q04410 372 aaKnown RBP5.75□□□□□ -1.49
NUP57YGR119C YPR170W-BP0C5R9 85 aa5.74□□□□□ -1.49
NUP57YGR119C RPI1P23250 407 aaKnown RBP5.74□□□□□ -1.49
NUP57YGR119C YPS1P32329 569 aa5.74□□□□□ -1.49
NUP57YGR119C ADH5P38113 351 aaKnown RBP5.74□□□□□ -1.49
NUP57YGR119C YJL213WP40896 331 aa5.74□□□□□ -1.49
NUP57YGR119C YPI1P43587 155 aa5.74□□□□□ -1.49
NUP57YGR119C POP3P53833 195 aaPredicted RBP5.74□□□□□ -1.49
NUP57YGR119C SWT21P53873 357 aaPredicted RBP5.74□□□□□ -1.49
NUP57YGR119C YNL046WP53956 172 aa5.74□□□□□ -1.49
NUP57YGR119C MIX17Q03667 156 aa5.74□□□□□ -1.49
NUP57YGR119C DPP1Q05521 289 aa5.74□□□□□ -1.49
NUP57YGR119C TIM18Q08749 192 aa5.74□□□□□ -1.49
NUP57YGR119C YLR050CQ12155 161 aaKnown RBP5.74□□□□□ -1.49
NUP57YGR119C ATO3Q12359 275 aa5.74□□□□□ -1.49
NUP57YGR119C DDI2P0CH63 225 aa5.74□□□□□ -1.49
NUP57YGR119C DDI3P0CH64 225 aa5.74□□□□□ -1.49
NUP57YGR119C YMR141CP40211 102 aa5.74□□□□□ -1.49
NUP57YGR119C MIC26P50087 233 aa5.74□□□□□ -1.49
NUP57YGR119C YGL260WP53056 76 aa5.74□□□□□ -1.49
NUP57YGR119C DAD4P69851 72 aa5.74□□□□□ -1.49
NUP57YGR119C MSC3Q05812 728 aa5.74□□□□□ -1.49
NUP57YGR119C HTB2P02294 131 aa5.73□□□□□ -1.49
NUP57YGR119C YHR213WP0CI67 198 aa5.73□□□□□ -1.49
NUP57YGR119C RPL43AP0CX25 92 aaKnown RBP5.73□□□□□ -1.49
NUP57YGR119C RPL43BP0CX26 92 aa5.73□□□□□ -1.49
NUP57YGR119C DAL80P26343 269 aa5.73□□□□□ -1.49
NUP57YGR119C RRT1P38192 103 aa5.73□□□□□ -1.49
NUP57YGR119C IMP2P46972 177 aa5.73□□□□□ -1.49
NUP57YGR119C UPS3Q04006 179 aa5.73□□□□□ -1.49
NUP57YGR119C CPT1P17898 393 aa5.72□□□□□ -1.49
NUP57YGR119C TIR2P33890 251 aa5.72□□□□□ -1.49
NUP57YGR119C SGN1P40561 250 aaKnown RBP RIP-Chip data5.72□□□□□ -1.49not detected
NUP57YGR119C YDL009CQ12210 107 aa5.72□□□□□ -1.49
NUP57YGR119C DAD1Q12248 94 aa5.72□□□□□ -1.49
NUP57YGR119C YKR070WP36151 352 aaKnown RBP5.71□□□□□ -1.5
NUP57YGR119C YGR017WP53210 297 aa5.71□□□□□ -1.5
NUP57YGR119C VPS71Q03433 280 aa5.71□□□□□ -1.5
NUP57YGR119C GTO3Q04806 366 aa5.71□□□□□ -1.5
NUP57YGR119C MRPL20P22354 195 aaPredicted RBP5.7□□□□□ -1.5
NUP57YGR119C MRP49P32388 137 aa5.7□□□□□ -1.5
NUP57YGR119C ECM14P38836 430 aa5.7□□□□□ -1.5
NUP57YGR119C YER121WP40076 114 aa5.7□□□□□ -1.5
NUP57YGR119C YNL234WP53857 426 aa5.7□□□□□ -1.5
NUP57YGR119C BET5Q03630 159 aa5.7□□□□□ -1.5
NUP57YGR119C YIL002W-AQ3E7Z5 69 aa5.7□□□□□ -1.5
NUP57YGR119C MBF1O14467 151 aaKnown RBP5.7□□□□□ -1.5
NUP57YGR119C ADH2P00331 348 aaKnown RBP5.7□□□□□ -1.5
NUP57YGR119C RPL12AP0CX53 165 aaKnown RBP5.7□□□□□ -1.5
NUP57YGR119C RPL12BP0CX54 165 aa5.7□□□□□ -1.5
NUP57YGR119C RPF1P38805 295 aaKnown RBP5.7□□□□□ -1.5
NUP57YGR119C MBB1P39534 108 aa5.7□□□□□ -1.5
NUP57YGR119C GLE2P40066 365 aa5.7□□□□□ -1.5
NUP57YGR119C YIP1P53039 248 aa5.7□□□□□ -1.5
NUP57YGR119C IRC25Q07951 179 aa5.7□□□□□ -1.5
NUP57YGR119C YLR363W-AQ3E747 85 aa5.7□□□□□ -1.5
NUP57YGR119C PRE1P22141 198 aaKnown RBP5.69□□□□□ -1.5
NUP57YGR119C PET8P38921 284 aa5.69□□□□□ -1.5
NUP57YGR119C YJL027CP47063 138 aaPredicted RBP5.69□□□□□ -1.5
NUP57YGR119C SNA4Q07549 140 aa5.69□□□□□ -1.5
NUP57YGR119C YDL218WQ07629 317 aa5.69□□□□□ -1.5
NUP57YGR119C HTL1Q9URQ5 78 aa5.69□□□□□ -1.5
NUP57YGR119C YBR144CP34215 104 aa5.68□□□□□ -1.5
NUP57YGR119C YIL014C-AQ02598 104 aa5.68□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms