RNA–Protein interactions for RNA: YGL003C

CDH1, Transcript of Activator of anaphase-promoting complex/cyclosome (APC/C), yeastyeast

Gene CDH1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDH1YGL003C NDD1Q08887 554 aa2.6□□□□□ -1.99
CDH1YGL003C YPR203WQ08994 102 aa2.6□□□□□ -1.99
CDH1YGL003C YPL162CQ12042 273 aa2.6□□□□□ -1.99
CDH1YGL003C Q0255P03881 472 aa2.59□□□□□ -1.99
CDH1YGL003C MRS3P10566 314 aa2.59□□□□□ -1.99
CDH1YGL003C URA5P13298 226 aaKnown RBP2.59□□□□□ -1.99
CDH1YGL003C YGL010WP25338 174 aa2.59□□□□□ -1.99
CDH1YGL003C CSE2P33308 149 aa2.59□□□□□ -1.99
CDH1YGL003C MRPL27P36526 146 aaPredicted RBP2.59□□□□□ -1.99
CDH1YGL003C UMP1P38293 148 aa2.59□□□□□ -1.99
CDH1YGL003C TEM1P38987 245 aa2.59□□□□□ -1.99
CDH1YGL003C YND1P40009 630 aa2.59□□□□□ -1.99
CDH1YGL003C YJL028WP47062 111 aa2.59□□□□□ -1.99
CDH1YGL003C EMC4P53073 190 aa2.59□□□□□ -1.99
CDH1YGL003C NRM1P53718 249 aa2.59□□□□□ -1.99
CDH1YGL003C RPL15BP54780 204 aaPredicted RBP2.59□□□□□ -1.99
CDH1YGL003C BUD25P85052 153 aa2.59□□□□□ -1.99
CDH1YGL003C FSH2Q05015 223 aa2.59□□□□□ -1.99
CDH1YGL003C PRM3Q08931 133 aa2.59□□□□□ -1.99
CDH1YGL003C YLR112WQ12130 139 aa2.59□□□□□ -1.99
CDH1YGL003C YHR214C-EQ8TGK0 99 aa2.59□□□□□ -1.99
CDH1YGL003C ODC2Q99297 307 aa2.59□□□□□ -1.99
CDH1YGL003C HTL1Q9URQ5 78 aa2.59□□□□□ -1.99
CDH1YGL003C PAU1P0CE88 120 aa2.59□□□□□ -2
CDH1YGL003C PAU14P0CE89 120 aa2.59□□□□□ -2
CDH1YGL003C PAU6P0CE90 120 aa2.59□□□□□ -2
CDH1YGL003C PAU18P0CE91 120 aa2.59□□□□□ -2
CDH1YGL003C PAU8P0CE92 120 aa2.59□□□□□ -2
CDH1YGL003C PAU11P0CE93 120 aa2.59□□□□□ -2
CDH1YGL003C ATX1P38636 73 aa2.59□□□□□ -2
CDH1YGL003C PAU13P38725 120 aa2.59□□□□□ -2
CDH1YGL003C YHR138CP38841 114 aaPredicted RBP2.59□□□□□ -2
CDH1YGL003C SKI6P46948 246 aaPredicted RBP2.59□□□□□ -2
CDH1YGL003C BAT2P47176 376 aaKnown RBP2.59□□□□□ -2
CDH1YGL003C YGR018CP53211 109 aa2.59□□□□□ -2
CDH1YGL003C PAU4P53427 120 aa2.59□□□□□ -2
CDH1YGL003C PAU10Q03050 120 aa2.59□□□□□ -2
CDH1YGL003C PAU20Q08322 120 aa2.59□□□□□ -2
CDH1YGL003C TIM18Q08749 192 aa2.59□□□□□ -2
CDH1YGL003C PAU9Q3E770 120 aa2.59□□□□□ -2
CDH1YGL003C SCS22Q6Q595 175 aa2.59□□□□□ -2
CDH1YGL003C CDC39P25655 2108 aaKnown RBP2.58□□□□□ -2
CDH1YGL003C COX9P07255 59 aa2.58□□□□□ -2
CDH1YGL003C SEC11P15367 167 aa2.58□□□□□ -2
CDH1YGL003C CSH1P38287 376 aa2.58□□□□□ -2
CDH1YGL003C EAF6P47128 113 aa2.58□□□□□ -2
CDH1YGL003C RPL21AQ02753 160 aaKnown RBP2.58□□□□□ -2
CDH1YGL003C YML079WQ03629 201 aa2.58□□□□□ -2
CDH1YGL003C YOR292CQ08743 309 aa2.58□□□□□ -2
CDH1YGL003C RPL21BQ12672 160 aaKnown RBP2.58□□□□□ -2
CDH1YGL003C YIL102C-AQ2V2P5 75 aa2.58□□□□□ -2
CDH1YGL003C MRS4P23500 304 aa2.57□□□□□ -2
CDH1YGL003C AHT1P29589 182 aa2.57□□□□□ -2
CDH1YGL003C YRA2P36036 203 aaKnown RBP RIP-Chip data2.57□□□□□ -2not detected
CDH1YGL003C YBL081WP38180 368 aaKnown RBP2.57□□□□□ -2
CDH1YGL003C PET8P38921 284 aa2.57□□□□□ -2
CDH1YGL003C YAR029WP39549 74 aa2.57□□□□□ -2
CDH1YGL003C GEP7P53171 287 aa2.57□□□□□ -2
CDH1YGL003C SPG3Q04398 127 aaPredicted RBP2.57□□□□□ -2
CDH1YGL003C YMR103CQ04436 120 aa2.57□□□□□ -2
CDH1YGL003C SYM1Q06563 197 aa2.57□□□□□ -2
CDH1YGL003C MSA1Q08471 629 aa2.57□□□□□ -2
CDH1YGL003C YOR097CQ12274 175 aaPredicted RBP2.57□□□□□ -2
CDH1YGL003C ATO3Q12359 275 aa2.57□□□□□ -2
CDH1YGL003C HEM4P06174 275 aa2.56□□□□□ -2
CDH1YGL003C YOL162WP0CF19 215 aa2.56□□□□□ -2
CDH1YGL003C RPL23AP0CX41 137 aaKnown RBP2.56□□□□□ -2
CDH1YGL003C RPL23BP0CX42 137 aaKnown RBP2.56□□□□□ -2
CDH1YGL003C HMRA1P0CY11 126 aa2.56□□□□□ -2
CDH1YGL003C COX10P21592 462 aa2.56□□□□□ -2
CDH1YGL003C GPX1P36014 167 aa2.56□□□□□ -2
CDH1YGL003C FYV4P38783 130 aaPredicted RBP2.56□□□□□ -2
CDH1YGL003C GGC1P38988 300 aa2.56□□□□□ -2
CDH1YGL003C TIM17P39515 158 aa2.56□□□□□ -2
CDH1YGL003C YGR164WP53291 111 aa2.56□□□□□ -2
CDH1YGL003C YMR090WQ04304 227 aaKnown RBP2.56□□□□□ -2
CDH1YGL003C YCR024C-BQ3E7Z8 88 aa2.56□□□□□ -2
CDH1YGL003C YPR096CO13587 100 aa2.56□□□□□ -2
CDH1YGL003C AGA2P32781 87 aa2.56□□□□□ -2
CDH1YGL003C SFT2P38166 215 aa2.56□□□□□ -2
CDH1YGL003C PHO88P38264 188 aaPredicted RBP2.56□□□□□ -2
CDH1YGL003C TPC1P53257 314 aa2.56□□□□□ -2
CDH1YGL003C YMR181CQ03231 154 aa2.56□□□□□ -2
CDH1YGL003C YMR082CQ04276 118 aa2.56□□□□□ -2
CDH1YGL003C RIM9Q04734 239 aa2.56□□□□□ -2
CDH1YGL003C FCF1Q05498 189 aaPredicted RBP2.56□□□□□ -2
CDH1YGL003C YLR281CQ05863 155 aa2.56□□□□□ -2
CDH1YGL003C YDL211CQ12121 372 aa2.56□□□□□ -2
CDH1YGL003C POC4Q12245 148 aaPredicted RBP2.56□□□□□ -2
CDH1YGL003C ATG40Q99325 256 aa2.56□□□□□ -2
CDH1YGL003C CYR1P08678 2026 aaKnown RBP2.55□□□□□ -2
CDH1YGL003C PIS1P06197 220 aaKnown RBP2.55□□□□□ -2
CDH1YGL003C RPL42AP0CX27 106 aaKnown RBP2.55□□□□□ -2
CDH1YGL003C RPL42BP0CX28 106 aaKnown RBP2.55□□□□□ -2
CDH1YGL003C HSP12P22943 109 aaKnown RBP2.55□□□□□ -2
CDH1YGL003C TOM40P23644 387 aaKnown RBP2.55□□□□□ -2
CDH1YGL003C LDB16P25587 256 aa2.55□□□□□ -2
CDH1YGL003C COX14P39103 70 aa2.55□□□□□ -2
CDH1YGL003C EDC2P40023 145 aaPredicted RBP2.55□□□□□ -2
CDH1YGL003C YPL039WQ03080 316 aa2.55□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 32.6 ms