RNA–Protein interactions for RNA: YCR092C

MSH3, Transcript of Mismatch repair protein, yeastyeast

Gene MSH3, Length 3,057 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH3YCR092C CGR1P53188 120 aa0.94□□□□□ -2.26
MSH3YCR092C YLR031WQ07978 186 aa0.94□□□□□ -2.26
MSH3YCR092C PCC1Q3E833 88 aa0.94□□□□□ -2.26
MSH3YCR092C YER175W-AQ8TGU4 54 aa0.94□□□□□ -2.26
MSH3YCR092C ENV10Q99382 181 aa0.94□□□□□ -2.26
MSH3YCR092C PDX3P38075 228 aaKnown RBP0.94□□□□□ -2.26
MSH3YCR092C PCL7P40186 285 aa0.94□□□□□ -2.26
MSH3YCR092C TIR3P40552 269 aa0.94□□□□□ -2.26
MSH3YCR092C KEG1P43614 200 aa0.94□□□□□ -2.26
MSH3YCR092C YJR085CP47131 105 aaKnown RBP0.94□□□□□ -2.26
MSH3YCR092C YGR149WP48236 432 aa0.94□□□□□ -2.26
MSH3YCR092C YNR066CP53752 436 aa0.94□□□□□ -2.26
MSH3YCR092C SNZ1Q03148 297 aa0.94□□□□□ -2.26
MSH3YCR092C YMR090WQ04304 227 aaKnown RBP0.94□□□□□ -2.26
MSH3YCR092C ARC18Q05933 178 aaKnown RBP0.94□□□□□ -2.26
MSH3YCR092C COA3Q3E7B2 85 aa0.94□□□□□ -2.26
MSH3YCR092C YGR121W-AQ3E816 71 aa0.94□□□□□ -2.26
MSH3YCR092C FRS1P15624 595 aaKnown RBP0.93□□□□□ -2.26
MSH3YCR092C KTI12P34253 313 aaKnown RBP0.93□□□□□ -2.26
MSH3YCR092C SUR2P38992 349 aa0.93□□□□□ -2.26
MSH3YCR092C PRE5P40302 234 aaKnown RBP0.93□□□□□ -2.26
MSH3YCR092C TOS6P48560 102 aa0.93□□□□□ -2.26
MSH3YCR092C IMD3P50095 523 aaKnown RBP0.93□□□□□ -2.26
MSH3YCR092C MGR2Q02889 113 aa0.93□□□□□ -2.26
MSH3YCR092C SHH3Q04487 196 aa0.93□□□□□ -2.26
MSH3YCR092C AVO2Q04749 426 aa0.93□□□□□ -2.26
MSH3YCR092C DPP1Q05521 289 aa0.93□□□□□ -2.26
MSH3YCR092C POS5Q06892 414 aa0.93□□□□□ -2.26
MSH3YCR092C YLR118CQ12354 227 aa0.93□□□□□ -2.26
MSH3YCR092C YOS1Q3E834 85 aa0.93□□□□□ -2.26
MSH3YCR092C ECM12O13529 151 aa0.93□□□□□ -2.26
MSH3YCR092C MBF1O14467 151 aaKnown RBP0.93□□□□□ -2.26
MSH3YCR092C ADH2P00331 348 aaKnown RBP0.93□□□□□ -2.26
MSH3YCR092C ANB1P19211 157 aa0.93□□□□□ -2.26
MSH3YCR092C NHP2P32495 156 aaPredicted RBP0.93□□□□□ -2.26
MSH3YCR092C YER135CP40082 130 aa0.93□□□□□ -2.26
MSH3YCR092C FMC1P40491 155 aa0.93□□□□□ -2.26
MSH3YCR092C YFR045WP43617 309 aa0.93□□□□□ -2.26
MSH3YCR092C SFT1P43682 97 aa0.93□□□□□ -2.26
MSH3YCR092C YJR146WP47174 117 aa0.93□□□□□ -2.26
MSH3YCR092C PNC1P53184 216 aaKnown RBP0.93□□□□□ -2.26
MSH3YCR092C FMP48P53233 369 aa0.93□□□□□ -2.26
MSH3YCR092C YDR042CQ03205 200 aa0.93□□□□□ -2.26
MSH3YCR092C ATC1Q04005 294 aa0.93□□□□□ -2.26
MSH3YCR092C YMR252CQ04814 134 aa0.93□□□□□ -2.26
MSH3YCR092C YOL160WQ08321 113 aa0.93□□□□□ -2.26
MSH3YCR092C YOR192C-CQ3E736 78 aa0.93□□□□□ -2.26
MSH3YCR092C NRG2P38082 220 aa0.92□□□□□ -2.26
MSH3YCR092C YBR242WP38331 238 aa0.92□□□□□ -2.26
MSH3YCR092C RRF1P38771 230 aa0.92□□□□□ -2.26
MSH3YCR092C AIM19P40502 157 aa0.92□□□□□ -2.26
MSH3YCR092C PHS1P40857 217 aa0.92□□□□□ -2.26
MSH3YCR092C GPI19Q04082 140 aa0.92□□□□□ -2.26
MSH3YCR092C RPL27AP0C2H6 136 aaKnown RBP0.92□□□□□ -2.26
MSH3YCR092C MRP2P10663 115 aaPredicted RBP0.92□□□□□ -2.26
MSH3YCR092C RPS2P25443 254 aaKnown RBP0.92□□□□□ -2.26
MSH3YCR092C SDS23P53172 527 aa0.92□□□□□ -2.26
MSH3YCR092C PKR1Q03880 122 aaKnown RBP0.92□□□□□ -2.26
MSH3YCR092C DTD1Q07648 150 aaKnown RBP0.92□□□□□ -2.26
MSH3YCR092C YDL242WQ07746 117 aa0.92□□□□□ -2.26
MSH3YCR092C POM33Q12164 279 aa0.92□□□□□ -2.26
MSH3YCR092C TIR4Q12218 487 aaPredicted RBP0.92□□□□□ -2.26
MSH3YCR092C TIM22Q12328 207 aa0.92□□□□□ -2.26
MSH3YCR092C RPS22BQ3E7Y3 130 aaKnown RBP0.92□□□□□ -2.26
MSH3YCR092C Q0017Q9ZZX8 53 aa0.92□□□□□ -2.26
MSH3YCR092C UTP20P35194 2493 aaKnown RBP0.92□□□□□ -2.26
MSH3YCR092C YBR085C-AO43137 85 aa0.92□□□□□ -2.26
MSH3YCR092C PFY1P07274 126 aa0.92□□□□□ -2.26
MSH3YCR092C AGA1P32323 725 aa0.92□□□□□ -2.26
MSH3YCR092C MRPS9P38120 278 aa0.92□□□□□ -2.26
MSH3YCR092C VPS28Q02767 242 aa0.92□□□□□ -2.26
MSH3YCR092C YFH1Q07540 174 aa0.92□□□□□ -2.26
MSH3YCR092C LCL2Q08045 131 aa0.92□□□□□ -2.26
MSH3YCR092C YOP1Q12402 180 aa0.92□□□□□ -2.26
MSH3YCR092C PAA1Q12447 191 aaKnown RBP0.92□□□□□ -2.26
MSH3YCR092C BPH1P25356 2167 aa0.91□□□□□ -2.26
MSH3YCR092C HYP2P23301 157 aaKnown RBP0.91□□□□□ -2.26
MSH3YCR092C LDS1P31379 325 aa0.91□□□□□ -2.26
MSH3YCR092C MSK1P32048 576 aa0.91□□□□□ -2.26
MSH3YCR092C GDT1P38301 280 aaPredicted RBP0.91□□□□□ -2.26
MSH3YCR092C PAU7P39545 55 aa0.91□□□□□ -2.26
MSH3YCR092C VTC1P40046 129 aaRIP-Chip data0.91□□□□□ -2.26not detected
MSH3YCR092C PAU5P43575 122 aa0.91□□□□□ -2.26
MSH3YCR092C PLP1Q04004 230 aa0.91□□□□□ -2.26
MSH3YCR092C YOL118CQ08259 102 aa0.91□□□□□ -2.26
MSH3YCR092C PPT2Q12036 173 aa0.91□□□□□ -2.26
MSH3YCR092C FCY1Q12178 158 aa0.91□□□□□ -2.26
MSH3YCR092C COX19Q3E731 98 aa0.91□□□□□ -2.26
MSH3YCR092C COA2Q3E823 68 aa0.91□□□□□ -2.26
MSH3YCR092C PCL2P25693 308 aa0.91□□□□□ -2.26
MSH3YCR092C TIR2P33890 251 aa0.91□□□□□ -2.26
MSH3YCR092C MBB1P39534 108 aa0.91□□□□□ -2.26
MSH3YCR092C SSO2P39926 295 aa0.91□□□□□ -2.26
MSH3YCR092C SER2P42941 309 aa0.91□□□□□ -2.26
MSH3YCR092C MGA1P53050 456 aa0.91□□□□□ -2.26
MSH3YCR092C YGL193CP53097 103 aa0.91□□□□□ -2.26
MSH3YCR092C YMR320WQ04897 101 aa0.91□□□□□ -2.26
MSH3YCR092C YOR105WQ08504 108 aa0.91□□□□□ -2.26
MSH3YCR092C YDR029WQ12111 104 aa0.91□□□□□ -2.26
MSH3YCR092C ERV2Q12284 196 aa0.91□□□□□ -2.26
Retrieved 100 of 5,963 RNA–protein pairs in 17.3 ms