RNA–Protein interactions for RNA: NME1

NME1, Transcript of RNA component of RNase MRP, yeastyeast

Gene NME1, Length 340 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NME1NME1 YCR050CP25630 102 aa3.07□□□□□ -1.92
NME1NME1 SUA7P29055 345 aaPredicted RBP3.07□□□□□ -1.92
NME1NME1 IRC21Q04772 201 aa3.07□□□□□ -1.92
NME1NME1 FUN14P18411 198 aa3.06□□□□□ -1.92
NME1NME1 YPL067CQ02754 198 aa3.06□□□□□ -1.92
NME1NME1 YMR122CQ03879 124 aa3.06□□□□□ -1.92
NME1NME1 ATP14Q12349 124 aa3.06□□□□□ -1.92
NME1NME1 ANB1P19211 157 aa3.05□□□□□ -1.92
NME1NME1 QCR10P37299 77 aa3.05□□□□□ -1.92
NME1NME1 YGR017WP53210 297 aa3.05□□□□□ -1.92
NME1NME1 YNL277W-AQ3E7Z0 62 aa3.05□□□□□ -1.92
NME1NME1 ROM2P51862 1356 aaKnown RBP3.03□□□□□ -1.92
NME1NME1 LST8P41318 303 aa3.03□□□□□ -1.92
NME1NME1 BRP1P53194 125 aa3.03□□□□□ -1.92
NME1NME1 SPC2Q04969 178 aa3.03□□□□□ -1.92
NME1NME1 YDR278CQ05612 105 aa3.03□□□□□ -1.92
NME1NME1 YER188C-AP0C0V2 99 aa3.02□□□□□ -1.93
NME1NME1 RPS22AP0C0W1 130 aaKnown RBP3.02□□□□□ -1.93
NME1NME1 MGR2Q02889 113 aa3.02□□□□□ -1.93
NME1NME1 YLR361C-AQ3E795 98 aa3.02□□□□□ -1.93
NME1NME1 RPS22BQ3E7Y3 130 aaKnown RBP3.02□□□□□ -1.93
NME1NME1 YHR213WP0CI67 198 aa3.01□□□□□ -1.93
NME1NME1 NMT1P14743 455 aa3.01□□□□□ -1.93
NME1NME1 YAL064WP39711 94 aa3.01□□□□□ -1.93
NME1NME1 YJL009WP47078 108 aa3.01□□□□□ -1.93
NME1NME1 YGL149WP53116 101 aa3.01□□□□□ -1.93
NME1NME1 ACP1P32463 125 aa3□□□□□ -1.93
NME1NME1 RPS20P38701 121 aaKnown RBP3□□□□□ -1.93
NME1NME1 KTI11Q3E840 82 aa3□□□□□ -1.93
NME1NME1 TRS20P38334 175 aa2.99□□□□□ -1.93
NME1NME1 POP7P38291 140 aa2.98□□□□□ -1.93
NME1NME1 SDH7Q04401 133 aa2.98□□□□□ -1.93
NME1NME1 YHR213W-BQ8TGK1 99 aa2.98□□□□□ -1.93
NME1NME1 HFA1P32874 2273 aa2.98□□□□□ -1.93
NME1NME1 RPL40AP0CH08 128 aaKnown RBP2.97□□□□□ -1.93
NME1NME1 RPL40BP0CH09 128 aaKnown RBP2.97□□□□□ -1.93
NME1NME1 PRS3P38689 320 aaKnown RBP2.97□□□□□ -1.93
NME1NME1 TVP18Q04767 167 aa2.97□□□□□ -1.93
NME1NME1 PRM3Q08931 133 aa2.97□□□□□ -1.93
NME1NME1 PHS1P40857 217 aa2.96□□□□□ -1.94
NME1NME1 HHY1P39982 102 aa2.95□□□□□ -1.94
NME1NME1 CNL1Q06333 122 aa2.95□□□□□ -1.94
NME1NME1 HYM1P32464 399 aa2.94□□□□□ -1.94
NME1NME1 UTP11P34247 250 aaPredicted RBP2.94□□□□□ -1.94
NME1NME1 HAP3P13434 144 aa2.93□□□□□ -1.94
NME1NME1 TIM8P57744 87 aa2.93□□□□□ -1.94
NME1NME1 COA4Q05809 96 aa2.93□□□□□ -1.94
NME1NME1 MRPL11P36521 249 aaPredicted RBP2.92□□□□□ -1.94
NME1NME1 HSP10P38910 106 aa2.92□□□□□ -1.94
NME1NME1 MPC1P53157 130 aaKnown RBP2.92□□□□□ -1.94
NME1NME1 Q0144Q9ZZW2 109 aa2.92□□□□□ -1.94
NME1NME1 PFY1P07274 126 aa2.91□□□□□ -1.94
NME1NME1 PAU21P0CE86 164 aa2.91□□□□□ -1.94
NME1NME1 PAU22P0CE87 164 aa2.91□□□□□ -1.94
NME1NME1 YLR296WQ05898 108 aa2.89□□□□□ -1.95
NME1NME1 DYN2Q02647 92 aa2.88□□□□□ -1.95
NME1NME1 SFT1P43682 97 aa2.87□□□□□ -1.95
NME1NME1 GTT2Q12390 233 aa2.87□□□□□ -1.95
NME1NME1 COA6Q3E846 104 aa2.83□□□□□ -1.96
NME1NME1 RTC6O14464 93 aa2.82□□□□□ -1.96
NME1NME1 AIM4P38305 123 aaPredicted RBP2.81□□□□□ -1.96
NME1NME1 NKP2Q06162 153 aa2.81□□□□□ -1.96
NME1NME1 AIM18P38884 321 aa2.79□□□□□ -1.96
NME1NME1 SNT2P53127 1403 aa2.78□□□□□ -1.96
NME1NME1 GSP1P32835 219 aaKnown RBP2.77□□□□□ -1.97
NME1NME1 GAT4P40569 121 aa2.77□□□□□ -1.97
NME1NME1 LDB18Q07887 179 aa2.77□□□□□ -1.97
NME1NME1 YMR141CP40211 102 aa2.76□□□□□ -1.97
NME1NME1 ERV14P53173 138 aa2.75□□□□□ -1.97
NME1NME1 RAD50P12753 1312 aa2.74□□□□□ -1.97
NME1NME1 GSC2P40989 1895 aa2.74□□□□□ -1.97
NME1NME1 YSF3P0C074 85 aaPredicted RBP2.74□□□□□ -1.97
NME1NME1 MVB12P42939 101 aa2.74□□□□□ -1.97
NME1NME1 FIT3Q08907 204 aa2.74□□□□□ -1.97
NME1NME1 RPL36BO14455 100 aaKnown RBP2.73□□□□□ -1.97
NME1NME1 RPL36AP05745 100 aaPredicted RBP2.73□□□□□ -1.97
NME1NME1 MED11Q99278 115 aa2.73□□□□□ -1.97
NME1NME1 MRP49P32388 137 aa2.72□□□□□ -1.97
NME1NME1 SAE3P89114 91 aa2.72□□□□□ -1.97
NME1NME1 SEC59P20048 519 aa2.71□□□□□ -1.98
NME1NME1 YBR013CP38215 129 aa2.71□□□□□ -1.98
NME1NME1 MIC27P50945 234 aa2.7□□□□□ -1.98
NME1NME1 FCF2Q12035 217 aaPredicted RBP2.69□□□□□ -1.98
NME1NME1 SLO1Q3E784 85 aa2.68□□□□□ -1.98
NME1NME1 HUG1Q6Q5K6 68 aa2.68□□□□□ -1.98
NME1NME1 TRM732Q03496 1420 aa2.67□□□□□ -1.98
NME1NME1 MYO2P19524 1574 aaKnown RBP2.66□□□□□ -1.98
NME1NME1 YKL044WP36092 106 aa2.64□□□□□ -1.99
NME1NME1 HPA2Q06592 156 aa2.62□□□□□ -1.99
NME1NME1 VMA7P39111 118 aa2.61□□□□□ -1.99
NME1NME1 YOR376W-AQ3E805 51 aa2.61□□□□□ -1.99
NME1NME1 AIM11P87275 137 aa2.59□□□□□ -1.99
NME1NME1 YLR118CQ12354 227 aa2.59□□□□□ -1.99
NME1NME1 YIL163CP40448 117 aa2.58□□□□□ -2
NME1NME1 GPI19Q04082 140 aa2.58□□□□□ -2
NME1NME1 TY4B-JP47024 1803 aa2.58□□□□□ -2
NME1NME1 RPL43AP0CX25 92 aaKnown RBP2.56□□□□□ -2
NME1NME1 RPL43BP0CX26 92 aa2.56□□□□□ -2
NME1NME1 YLR099W-AQ3E798 87 aa2.56□□□□□ -2
NME1NME1 MRPL31P14063 131 aaPredicted RBP2.55□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms