RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-222	ENST00000641587	TMEM150A	Q86TG1	271 aa		10.8	□□□□□ -0.68
PHGDH-222	ENST00000641587	ITIH5	Q86UX2	942 aa		10.8	□□□□□ -0.68
PHGDH-222	ENST00000641587	LRRTM3	Q86VH5	581 aa		10.8	□□□□□ -0.68
PHGDH-222	ENST00000641587	GPBP1	Q86WP2	473 aa		10.8	□□□□□ -0.68
PHGDH-222	ENST00000641587	MAB21L3	Q8N8X9	362 aa		10.8	□□□□□ -0.68
PHGDH-222	ENST00000641587	ERCC4	Q92889	916 aa	Predicted RBP	10.8	□□□□□ -0.68
PHGDH-222	ENST00000641587	PAGE5	Q96GU1	130 aa		10.8	□□□□□ -0.68
PHGDH-222	ENST00000641587	FAM83C	Q9BQN1	747 aa		10.8	□□□□□ -0.68
PHGDH-222	ENST00000641587	ANP32E	Q9BTT0	268 aa		10.8	□□□□□ -0.68
PHGDH-222	ENST00000641587	TIPIN	Q9BVW5	301 aa		10.8	□□□□□ -0.68
PHGDH-222	ENST00000641587	OXCT2	Q9BYC2	517 aa	Predicted RBP	10.8	□□□□□ -0.68
PHGDH-222	ENST00000641587	BLZF1	Q9H2G9	400 aa		10.8	□□□□□ -0.68
PHGDH-222	ENST00000641587	RPF1	Q9H9Y2	349 aa	Known RBP	10.8	□□□□□ -0.68
PHGDH-222	ENST00000641587	ABI2	Q9NYB9	513 aa	Predicted RBP	10.8	□□□□□ -0.68
PHGDH-222	ENST00000641587		K7ENM7	598 aa		10.79	□□□□□ -0.68
PHGDH-222	ENST00000641587	GIPC1	O14908	333 aa		10.79	□□□□□ -0.68
PHGDH-222	ENST00000641587	HNRNPDL	O14979	420 aa	Known RBP	10.79	□□□□□ -0.68
PHGDH-222	ENST00000641587	OGT	O15294	1046 aa		10.79	□□□□□ -0.68
PHGDH-222	ENST00000641587	SMC2	O95347	1197 aa		10.79	□□□□□ -0.68
PHGDH-222	ENST00000641587	CASP1	P29466	404 aa		10.79	□□□□□ -0.68
PHGDH-222	ENST00000641587	CDC25C	P30307	473 aa		10.79	□□□□□ -0.68
PHGDH-222	ENST00000641587	ASIC1	P78348	528 aa		10.79	□□□□□ -0.68
PHGDH-222	ENST00000641587	PLCB2	Q00722	1185 aa		10.79	□□□□□ -0.68
PHGDH-222	ENST00000641587	RUNX3	Q13761	415 aa		10.79	□□□□□ -0.68
PHGDH-222	ENST00000641587	VEPH1	Q14D04	833 aa		10.79	□□□□□ -0.68
PHGDH-222	ENST00000641587	SDHAF4	Q5VUM1	108 aa		10.79	□□□□□ -0.68
PHGDH-222	ENST00000641587	TXNDC8	Q6A555	127 aa		10.79	□□□□□ -0.68
PHGDH-222	ENST00000641587	PSAPL1	Q6NUJ1	521 aa		10.79	□□□□□ -0.68
PHGDH-222	ENST00000641587	CMTM8	Q8IZV2	173 aa		10.79	□□□□□ -0.68
PHGDH-222	ENST00000641587	SYNPO	Q8N3V7	929 aa		10.79	□□□□□ -0.68
PHGDH-222	ENST00000641587	KCTD17	Q8N5Z5	321 aa		10.79	□□□□□ -0.68
PHGDH-222	ENST00000641587	TTC16	Q8NEE8	873 aa		10.79	□□□□□ -0.68
PHGDH-222	ENST00000641587	DDX1	Q92499	740 aa	Known RBP	10.79	□□□□□ -0.68
PHGDH-222	ENST00000641587	EZH1	Q92800	747 aa	Predicted RBP	10.79	□□□□□ -0.68
PHGDH-222	ENST00000641587	USP13	Q92995	863 aa	Predicted RBP	10.79	□□□□□ -0.68
PHGDH-222	ENST00000641587	SMARCE1	Q969G3	411 aa		10.79	□□□□□ -0.68
PHGDH-222	ENST00000641587	GCNA	Q96QF7	691 aa		10.79	□□□□□ -0.68
PHGDH-222	ENST00000641587	REEP2	Q9BRK0	252 aa		10.79	□□□□□ -0.68
PHGDH-222	ENST00000641587	LRRC27	Q9C0I9	530 aa		10.79	□□□□□ -0.68
PHGDH-222	ENST00000641587	ZCWPW1	Q9H0M4	648 aa		10.79	□□□□□ -0.68
PHGDH-222	ENST00000641587	IKZF4	Q9H2S9	585 aa		10.79	□□□□□ -0.68
PHGDH-222	ENST00000641587	TMLHE	Q9NVH6	421 aa		10.79	□□□□□ -0.68
PHGDH-222	ENST00000641587	SLC8A2	Q9UPR5	921 aa		10.79	□□□□□ -0.68
PHGDH-222	ENST00000641587	ABCA7	Q8IZY2	2146 aa		10.79	□□□□□ -0.68
PHGDH-222	ENST00000641587	NUP205	Q92621	2012 aa		10.79	□□□□□ -0.68
PHGDH-222	ENST00000641587	ZZEF1	O43149	2961 aa		10.78	□□□□□ -0.68
PHGDH-222	ENST00000641587	ANO9	A1A5B4	782 aa		10.78	□□□□□ -0.68
PHGDH-222	ENST00000641587	ANTXRL	A6NF34	631 aa		10.78	□□□□□ -0.68
PHGDH-222	ENST00000641587	C1QTNF9B	B2RNN3	333 aa		10.78	□□□□□ -0.68
PHGDH-222	ENST00000641587	BIN1	O00499	593 aa		10.78	□□□□□ -0.68
PHGDH-222	ENST00000641587	PIR	O00625	290 aa		10.78	□□□□□ -0.68
PHGDH-222	ENST00000641587	CYB561D2	O14569	222 aa		10.78	□□□□□ -0.68
PHGDH-222	ENST00000641587	XPOT	O43592	962 aa	Known RBP	10.78	□□□□□ -0.68
PHGDH-222	ENST00000641587	FOXD2	O60548	495 aa	Predicted RBP	10.78	□□□□□ -0.68
PHGDH-222	ENST00000641587	TADA3	O75528	432 aa		10.78	□□□□□ -0.68
PHGDH-222	ENST00000641587	KCNK5	O95279	499 aa		10.78	□□□□□ -0.68
PHGDH-222	ENST00000641587	FGF19	O95750	216 aa		10.78	□□□□□ -0.68
PHGDH-222	ENST00000641587	CYP11A1	P05108	521 aa		10.78	□□□□□ -0.68
PHGDH-222	ENST00000641587	ADRB2	P07550	413 aa		10.78	□□□□□ -0.68
PHGDH-222	ENST00000641587	C1QTNF9	P0C862	333 aa		10.78	□□□□□ -0.68
PHGDH-222	ENST00000641587	HMGA1	P17096	107 aa	Known RBP	10.78	□□□□□ -0.68
PHGDH-222	ENST00000641587	SPINK2	P20155	84 aa		10.78	□□□□□ -0.68
PHGDH-222	ENST00000641587	ACOT2	P49753	483 aa		10.78	□□□□□ -0.68
PHGDH-222	ENST00000641587	NLRP12	P59046	1061 aa		10.78	□□□□□ -0.68
PHGDH-222	ENST00000641587	SHC2	P98077	582 aa		10.78	□□□□□ -0.68
PHGDH-222	ENST00000641587	GRSF1	Q12849	480 aa	Known RBP eCLIP	10.78	□□□□□ -0.68
PHGDH-222	ENST00000641587	CUL4B	Q13620	913 aa		10.78	□□□□□ -0.68
PHGDH-222	ENST00000641587	TMEM132D	Q14C87	1099 aa		10.78	□□□□□ -0.68
PHGDH-222	ENST00000641587	TAF12	Q16514	161 aa		10.78	□□□□□ -0.68
PHGDH-222	ENST00000641587	CCDC142	Q17RM4	750 aa		10.78	□□□□□ -0.68
PHGDH-222	ENST00000641587	PLK5	Q496M5	336 aa		10.78	□□□□□ -0.68
PHGDH-222	ENST00000641587	WSCD1	Q658N2	575 aa		10.78	□□□□□ -0.68
PHGDH-222	ENST00000641587	RNF43	Q68DV7	783 aa		10.78	□□□□□ -0.68
PHGDH-222	ENST00000641587	SASS6	Q6UVJ0	657 aa		10.78	□□□□□ -0.68
PHGDH-222	ENST00000641587	DYM	Q7RTS9	669 aa		10.78	□□□□□ -0.68
PHGDH-222	ENST00000641587	CCDC47	Q96A33	483 aa	Known RBP	10.78	□□□□□ -0.68
PHGDH-222	ENST00000641587	LOXL4	Q96JB6	756 aa		10.78	□□□□□ -0.68
PHGDH-222	ENST00000641587	MSTO1	Q9BUK6	570 aa		10.78	□□□□□ -0.68
PHGDH-222	ENST00000641587	EDEM2	Q9BV94	578 aa		10.78	□□□□□ -0.68
PHGDH-222	ENST00000641587	LSM14B	Q9BX40	385 aa	Known RBP	10.78	□□□□□ -0.68
PHGDH-222	ENST00000641587	DUSP15	Q9H1R2	295 aa	Predicted RBP	10.78	□□□□□ -0.68
PHGDH-222	ENST00000641587	ZHX3	Q9H4I2	956 aa		10.78	□□□□□ -0.68
PHGDH-222	ENST00000641587	KBTBD4	Q9NVX7	518 aa		10.78	□□□□□ -0.68
PHGDH-222	ENST00000641587	THG1L	Q9NWX6	298 aa	Known RBP	10.78	□□□□□ -0.68
PHGDH-222	ENST00000641587	CPSF3	Q9UKF6	684 aa	Known RBP	10.78	□□□□□ -0.68
PHGDH-222	ENST00000641587	TBX20	Q9UMR3	447 aa		10.78	□□□□□ -0.68
PHGDH-222	ENST00000641587	MAGED2	Q9UNF1	606 aa	Predicted RBP	10.78	□□□□□ -0.68
PHGDH-222	ENST00000641587	INVS	Q9Y283	1065 aa		10.78	□□□□□ -0.68
PHGDH-222	ENST00000641587		A0A0B4J269	797 aa		10.77	□□□□□ -0.69
PHGDH-222	ENST00000641587	CCDC163	A0A0D9SF12	145 aa		10.77	□□□□□ -0.69
PHGDH-222	ENST00000641587	MYMK	A6NI61	221 aa		10.77	□□□□□ -0.69
PHGDH-222	ENST00000641587	ANKRD63	C9JTQ0	380 aa		10.77	□□□□□ -0.69
PHGDH-222	ENST00000641587	TRDMT1	O14717	391 aa	Known RBP	10.77	□□□□□ -0.69
PHGDH-222	ENST00000641587	TBCA	O75347	108 aa	Known RBP	10.77	□□□□□ -0.69
PHGDH-222	ENST00000641587	PIGR	P01833	764 aa		10.77	□□□□□ -0.69
PHGDH-222	ENST00000641587	F11	P03951	625 aa		10.77	□□□□□ -0.69
PHGDH-222	ENST00000641587	HAPLN1	P10915	354 aa	Predicted RBP	10.77	□□□□□ -0.69
PHGDH-222	ENST00000641587	IDE	P14735	1019 aa		10.77	□□□□□ -0.69
PHGDH-222	ENST00000641587	WEE1	P30291	646 aa		10.77	□□□□□ -0.69
PHGDH-222	ENST00000641587	AVPR1A	P37288	418 aa		10.77	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms