RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 RDM1Q8NG50 284 aa17.37■□□□□ 0.37
HNRNPU-228ENST00000640306 RSAD2Q8WXG1 361 aa17.37■□□□□ 0.37
HNRNPU-228ENST00000640306 HSPH1Q92598 858 aa17.37■□□□□ 0.37
HNRNPU-228ENST00000640306 SGIP1Q9BQI5 828 aa17.37■□□□□ 0.37
HNRNPU-228ENST00000640306 TRIM6Q9C030 488 aaPredicted RBP17.37■□□□□ 0.37
HNRNPU-228ENST00000640306 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.37■□□□□ 0.37
HNRNPU-228ENST00000640306 SUPT20HL2P0C7V6 817 aa17.37■□□□□ 0.37
HNRNPU-228ENST00000640306 SRGAP2CP0DJJ0 459 aa17.37■□□□□ 0.37
HNRNPU-228ENST00000640306 PEX19P40855 299 aa17.37■□□□□ 0.37
HNRNPU-228ENST00000640306 SUPT20HL1Q3ZLR7 823 aa17.37■□□□□ 0.37
HNRNPU-228ENST00000640306 DENND1BQ6P3S1 775 aa17.37■□□□□ 0.37
HNRNPU-228ENST00000640306 TDRPQ86YL5 185 aa17.37■□□□□ 0.37
HNRNPU-228ENST00000640306 TMEM35BQ8NCS4 154 aa17.37■□□□□ 0.37
HNRNPU-228ENST00000640306 PCDH9Q9HC56 1237 aa17.37■□□□□ 0.37
HNRNPU-228ENST00000640306 ZNF302Q9NR11 478 aa17.37■□□□□ 0.37
HNRNPU-228ENST00000640306 KIAA1217Q5T5P2 1943 aa17.37■□□□□ 0.37
HNRNPU-228ENST00000640306 MAP3K6O95382 1288 aa17.37■□□□□ 0.37
HNRNPU-228ENST00000640306 CALB1P05937 261 aa17.37■□□□□ 0.37
HNRNPU-228ENST00000640306 PDHA1P08559 390 aa17.37■□□□□ 0.37
HNRNPU-228ENST00000640306 RPL22P35268 128 aaKnown RBP17.37■□□□□ 0.37
HNRNPU-228ENST00000640306 ABL2P42684 1182 aa17.37■□□□□ 0.37
HNRNPU-228ENST00000640306 SLC8A3P57103 927 aa17.37■□□□□ 0.37
HNRNPU-228ENST00000640306 NBPF12Q5TAG4 269 aaPredicted RBP17.37■□□□□ 0.37
HNRNPU-228ENST00000640306 EEPD1Q7L9B9 569 aa17.37■□□□□ 0.37
HNRNPU-228ENST00000640306 MAB21L3Q8N8X9 362 aa17.37■□□□□ 0.37
HNRNPU-228ENST00000640306 JDP2Q8WYK2 163 aa17.37■□□□□ 0.37
HNRNPU-228ENST00000640306 FAXDC2Q96IV6 333 aa17.37■□□□□ 0.37
HNRNPU-228ENST00000640306 TEPSINQ96N21 525 aa17.37■□□□□ 0.37
HNRNPU-228ENST00000640306 FOXP3Q9BZS1 431 aa17.37■□□□□ 0.37
HNRNPU-228ENST00000640306 PORCNQ9H237 461 aa17.37■□□□□ 0.37
HNRNPU-228ENST00000640306 DENND2DQ9H6A0 471 aaPredicted RBP17.37■□□□□ 0.37
HNRNPU-228ENST00000640306 RNPEPL1Q9HAU8 725 aa17.37■□□□□ 0.37
HNRNPU-228ENST00000640306 FBXO6Q9NRD1 293 aaPredicted RBP17.37■□□□□ 0.37
HNRNPU-228ENST00000640306 DKC1O60832 514 aaKnown RBP eCLIP17.36■□□□□ 0.37
HNRNPU-228ENST00000640306 STAM2O75886 525 aa17.36■□□□□ 0.37
HNRNPU-228ENST00000640306 MARK3P27448 753 aa17.36■□□□□ 0.37
HNRNPU-228ENST00000640306 GCLCP48506 637 aaPredicted RBP17.36■□□□□ 0.37
HNRNPU-228ENST00000640306 FKBP1CQ5VVH2 108 aa17.36■□□□□ 0.37
HNRNPU-228ENST00000640306 ZC3H18Q86VM9 953 aaKnown RBP17.36■□□□□ 0.37
HNRNPU-228ENST00000640306 IGDCC3Q8IVU1 814 aa17.36■□□□□ 0.37
HNRNPU-228ENST00000640306 ARFGAP1Q8N6T3 406 aa17.36■□□□□ 0.37
HNRNPU-228ENST00000640306 TTC17Q96AE7 1141 aa17.36■□□□□ 0.37
HNRNPU-228ENST00000640306 CALN1Q9BXU9 219 aa17.36■□□□□ 0.37
HNRNPU-228ENST00000640306 POLIQ9UNA4 740 aa17.36■□□□□ 0.37
HNRNPU-228ENST00000640306 SHOC2Q9UQ13 582 aa17.36■□□□□ 0.37
HNRNPU-228ENST00000640306 AVILO75366 819 aa17.36■□□□□ 0.37
HNRNPU-228ENST00000640306 OATP04181 439 aa17.36■□□□□ 0.37
HNRNPU-228ENST00000640306 KRT19P08727 400 aa17.36■□□□□ 0.37
HNRNPU-228ENST00000640306 CDH8P55286 799 aa17.36■□□□□ 0.37
HNRNPU-228ENST00000640306 RTP1P59025 263 aa17.36■□□□□ 0.37
HNRNPU-228ENST00000640306 CNTN2Q02246 1040 aa17.36■□□□□ 0.37
HNRNPU-228ENST00000640306 CAPSQ13938 189 aa17.36■□□□□ 0.37
HNRNPU-228ENST00000640306 TMEM132BQ14DG7 1078 aa17.36■□□□□ 0.37
HNRNPU-228ENST00000640306 PTPN20Q4JDL3 420 aa17.36■□□□□ 0.37
HNRNPU-228ENST00000640306 FYB2Q5VWT5 728 aa17.36■□□□□ 0.37
HNRNPU-228ENST00000640306 NPNTQ6UXI9 565 aa17.36■□□□□ 0.37
HNRNPU-228ENST00000640306 RFX8Q6ZV50 586 aa17.36■□□□□ 0.37
HNRNPU-228ENST00000640306 SAMD7Q7Z3H4 446 aa17.36■□□□□ 0.37
HNRNPU-228ENST00000640306 THNSL1Q8IYQ7 743 aa17.36■□□□□ 0.37
HNRNPU-228ENST00000640306 AGGF1Q8N302 714 aaeCLIP17.36■□□□□ 0.371e-9■■■□□ 16.9
HNRNPU-228ENST00000640306 MAP3K20Q9NYL2 800 aaKnown RBP17.36■□□□□ 0.37
HNRNPU-228ENST00000640306 KANSL3Q9P2N6 904 aa17.36■□□□□ 0.37
HNRNPU-228ENST00000640306 KIF1CO43896 1103 aaKnown RBP17.35■□□□□ 0.37
HNRNPU-228ENST00000640306 ASS1P00966 412 aaKnown RBP17.35■□□□□ 0.37
HNRNPU-228ENST00000640306 ITGAVP06756 1048 aa17.35■□□□□ 0.37
HNRNPU-228ENST00000640306 ARL4CP56559 192 aa17.35■□□□□ 0.37
HNRNPU-228ENST00000640306 MCL1Q07820 350 aa17.35■□□□□ 0.37
HNRNPU-228ENST00000640306 EFHC2Q5JST6 749 aa17.35■□□□□ 0.37
HNRNPU-228ENST00000640306 CEP128Q6ZU80 1094 aa17.35■□□□□ 0.37
HNRNPU-228ENST00000640306 RFX6Q8HWS3 928 aa17.35■□□□□ 0.37
HNRNPU-228ENST00000640306 SLC35B2Q8TB61 432 aa17.35■□□□□ 0.37
HNRNPU-228ENST00000640306 SYNCQ9H7C4 482 aa17.35■□□□□ 0.37
HNRNPU-228ENST00000640306 CYTH4Q9UIA0 394 aa17.35■□□□□ 0.37
HNRNPU-228ENST00000640306 XPO7Q9UIA9 1087 aaKnown RBP17.35■□□□□ 0.37
HNRNPU-228ENST00000640306 DRG1Q9Y295 367 aaKnown RBP17.35■□□□□ 0.37
HNRNPU-228ENST00000640306 STYXL1Q9Y6J8 313 aa17.35■□□□□ 0.37
HNRNPU-228ENST00000640306 TCRBV5S1A1TA0A578 114 aa17.35■□□□□ 0.37
HNRNPU-228ENST00000640306 H0YCG3 227 aa17.35■□□□□ 0.37
HNRNPU-228ENST00000640306 LRCH4O75427 683 aa17.35■□□□□ 0.37
HNRNPU-228ENST00000640306 KRT3P12035 628 aa17.35■□□□□ 0.37
HNRNPU-228ENST00000640306 CALB2P22676 271 aa17.35■□□□□ 0.37
HNRNPU-228ENST00000640306 ZNF132P52740 706 aa17.35■□□□□ 0.37
HNRNPU-228ENST00000640306 TRPC3Q13507 836 aa17.35■□□□□ 0.37
HNRNPU-228ENST00000640306 SLFN12LQ6IEE8 588 aa17.35■□□□□ 0.37
HNRNPU-228ENST00000640306 DRICH1Q6PGQ1 229 aaPredicted RBP17.35■□□□□ 0.37
HNRNPU-228ENST00000640306 CLNKQ7Z7G1 428 aa17.35■□□□□ 0.37
HNRNPU-228ENST00000640306 CEP120Q8N960 986 aa17.35■□□□□ 0.37
HNRNPU-228ENST00000640306 ATP11CQ8NB49 1132 aa17.35■□□□□ 0.37
HNRNPU-228ENST00000640306 NKD2Q969F2 451 aaPredicted RBP17.35■□□□□ 0.37
HNRNPU-228ENST00000640306 NAF1Q96HR8 494 aaKnown RBP17.35■□□□□ 0.37
HNRNPU-228ENST00000640306 FAM111AQ96PZ2 611 aa17.35■□□□□ 0.37
HNRNPU-228ENST00000640306 MIPEPQ99797 713 aa17.35■□□□□ 0.37
HNRNPU-228ENST00000640306 CYP39A1Q9NYL5 469 aa17.35■□□□□ 0.37
HNRNPU-228ENST00000640306 SENP1Q9P0U3 644 aa17.35■□□□□ 0.37
HNRNPU-228ENST00000640306 HEY2Q9UBP5 337 aa17.35■□□□□ 0.37
HNRNPU-228ENST00000640306 SLC24A2Q9UI40 661 aa17.35■□□□□ 0.37
HNRNPU-228ENST00000640306 TPBGLP0DKB5 382 aa17.34■□□□□ 0.37
HNRNPU-228ENST00000640306 NAMPTP43490 491 aa17.34■□□□□ 0.37
HNRNPU-228ENST00000640306 MMRN1Q13201 1228 aa17.34■□□□□ 0.37
HNRNPU-228ENST00000640306 RAB6CQ53S08 254 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms