RNA–Protein interactions for RNA: ENST00000639760.1

SMARCA2-266, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 2

Gene SMARCA2, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-266ENST00000639760 ZNF530Q6P9A1 599 aaPredicted RBP11.12□□□□□ -0.63
SMARCA2-266ENST00000639760 RNF207Q6ZRF8 634 aa11.12□□□□□ -0.63
SMARCA2-266ENST00000639760 NEK10Q6ZWH5 1172 aa11.12□□□□□ -0.63
SMARCA2-266ENST00000639760 SV2BQ7L1I2 683 aa11.12□□□□□ -0.63
SMARCA2-266ENST00000639760 GPR180Q86V85 440 aa11.12□□□□□ -0.63
SMARCA2-266ENST00000639760 SLC13A5Q86YT5 568 aaPredicted RBP11.12□□□□□ -0.63
SMARCA2-266ENST00000639760 ELMOD1Q8N336 334 aa11.12□□□□□ -0.63
SMARCA2-266ENST00000639760 ZNF276Q8N554 614 aa11.12□□□□□ -0.63
SMARCA2-266ENST00000639760 LNX1Q8TBB1 728 aaPredicted RBP11.12□□□□□ -0.63
SMARCA2-266ENST00000639760 TBC1D15Q8TC07 691 aa11.12□□□□□ -0.63
SMARCA2-266ENST00000639760 SNX29Q8TEQ0 813 aa11.12□□□□□ -0.63
SMARCA2-266ENST00000639760 PSPC1Q8WXF1 523 aaKnown RBP11.12□□□□□ -0.63
SMARCA2-266ENST00000639760 EGLN2Q96KS0 407 aa11.12□□□□□ -0.63
SMARCA2-266ENST00000639760 PWWP2AQ96N64 755 aa11.12□□□□□ -0.63
SMARCA2-266ENST00000639760 CSRNP1Q96S65 589 aa11.12□□□□□ -0.63
SMARCA2-266ENST00000639760 KLHL25Q9H0H3 589 aa11.12□□□□□ -0.63
SMARCA2-266ENST00000639760 SNX25Q9H3E2 840 aa11.12□□□□□ -0.63
SMARCA2-266ENST00000639760 PARVGQ9HBI0 331 aa11.12□□□□□ -0.63
SMARCA2-266ENST00000639760 AASDHPPTQ9NRN7 309 aa11.12□□□□□ -0.63
SMARCA2-266ENST00000639760 VPS45Q9NRW7 570 aa11.12□□□□□ -0.63
SMARCA2-266ENST00000639760 SACM1LQ9NTJ5 587 aa11.12□□□□□ -0.63
SMARCA2-266ENST00000639760 ERGIC3Q9Y282 383 aa11.12□□□□□ -0.63
SMARCA2-266ENST00000639760 ZBTB1Q9Y2K1 713 aa11.12□□□□□ -0.63
SMARCA2-266ENST00000639760 PCDHGA3Q9Y5H0 932 aa11.12□□□□□ -0.63
SMARCA2-266ENST00000639760 ALG6Q9Y672 507 aa11.12□□□□□ -0.63
SMARCA2-266ENST00000639760 DCAF8L1A6NGE4 600 aa11.12□□□□□ -0.63
SMARCA2-266ENST00000639760 POC1B-GALNT4F8VUJ3 575 aa11.12□□□□□ -0.63
SMARCA2-266ENST00000639760 PSMD12O00232 456 aaPredicted RBP11.12□□□□□ -0.63
SMARCA2-266ENST00000639760 RNMTO43148 476 aaKnown RBP11.12□□□□□ -0.63
SMARCA2-266ENST00000639760 CLASP2O75122 1294 aaKnown RBP11.12□□□□□ -0.63
SMARCA2-266ENST00000639760 LDHBP07195 334 aaKnown RBP11.12□□□□□ -0.63
SMARCA2-266ENST00000639760 SLC9A1P19634 815 aa11.12□□□□□ -0.63
SMARCA2-266ENST00000639760 ADAM17P78536 824 aa11.12□□□□□ -0.63
SMARCA2-266ENST00000639760 KCNH2Q12809 1159 aa11.12□□□□□ -0.63
SMARCA2-266ENST00000639760 SPCS2Q15005 226 aa11.12□□□□□ -0.63
SMARCA2-266ENST00000639760 SIX1Q15475 284 aaPredicted RBP11.12□□□□□ -0.63
SMARCA2-266ENST00000639760 TBCCQ15814 346 aa11.12□□□□□ -0.63
SMARCA2-266ENST00000639760 DPY19L2P1Q6NXN4 242 aa11.12□□□□□ -0.63
SMARCA2-266ENST00000639760 RELL1Q8IUW5 271 aa11.12□□□□□ -0.63
SMARCA2-266ENST00000639760 TTC13Q8NBP0 860 aa11.12□□□□□ -0.63
SMARCA2-266ENST00000639760 RPGRQ92834 1020 aaKnown RBP11.12□□□□□ -0.63
SMARCA2-266ENST00000639760 ISOC1Q96CN7 298 aa11.12□□□□□ -0.63
SMARCA2-266ENST00000639760 CFAP57Q96MR6 1250 aa11.12□□□□□ -0.63
SMARCA2-266ENST00000639760 PSD2Q9BQI7 771 aa11.12□□□□□ -0.63
SMARCA2-266ENST00000639760 VPS11Q9H270 941 aa11.12□□□□□ -0.63
SMARCA2-266ENST00000639760 LRRC19Q9H756 370 aa11.12□□□□□ -0.63
SMARCA2-266ENST00000639760 SMYD3Q9H7B4 428 aa11.12□□□□□ -0.63
SMARCA2-266ENST00000639760 SSU72Q9NP77 194 aaKnown RBP11.12□□□□□ -0.63
SMARCA2-266ENST00000639760 POU2F3Q9UKI9 436 aa11.12□□□□□ -0.63
SMARCA2-266ENST00000639760 ZBTB21Q9ULJ3 1066 aa11.12□□□□□ -0.63
SMARCA2-266ENST00000639760 MYMKA6NI61 221 aa11.11□□□□□ -0.63
SMARCA2-266ENST00000639760 ZNF701M0R085 212 aaPredicted RBP11.11□□□□□ -0.63
SMARCA2-266ENST00000639760 KPNA4O00629 521 aaPredicted RBP11.11□□□□□ -0.63
SMARCA2-266ENST00000639760 XPO1O14980 1071 aaKnown RBP11.11□□□□□ -0.63
SMARCA2-266ENST00000639760 RSL1D1O76021 490 aaKnown RBP11.11□□□□□ -0.63
SMARCA2-266ENST00000639760 P4HA1P13674 534 aa11.11□□□□□ -0.63
SMARCA2-266ENST00000639760 ATF2P15336 505 aa11.11□□□□□ -0.63
SMARCA2-266ENST00000639760 IVDP26440 423 aa11.11□□□□□ -0.63
SMARCA2-266ENST00000639760 CALML3P27482 149 aa11.11□□□□□ -0.63
SMARCA2-266ENST00000639760 HSPA13P48723 471 aa11.11□□□□□ -0.63
SMARCA2-266ENST00000639760 AP3M2P53677 418 aa11.11□□□□□ -0.63
SMARCA2-266ENST00000639760 PTK6Q13882 451 aa11.11□□□□□ -0.63
SMARCA2-266ENST00000639760 TRIM71Q2Q1W2 868 aaKnown RBP11.11□□□□□ -0.63
SMARCA2-266ENST00000639760 CYP4F22Q6NT55 531 aa11.11□□□□□ -0.63
SMARCA2-266ENST00000639760 CCDC81Q6ZN84 652 aa11.11□□□□□ -0.63
SMARCA2-266ENST00000639760 DYMQ7RTS9 669 aa11.11□□□□□ -0.63
SMARCA2-266ENST00000639760 CATIPQ7Z7H3 387 aa11.11□□□□□ -0.63
SMARCA2-266ENST00000639760 PRPF39Q86UA1 669 aaKnown RBP11.11□□□□□ -0.63
SMARCA2-266ENST00000639760 BLIDQ8IZY5 108 aa11.11□□□□□ -0.63
SMARCA2-266ENST00000639760 CATSPER1Q8NEC5 780 aa11.11□□□□□ -0.63
SMARCA2-266ENST00000639760 SLC30A5Q8TAD4 765 aa11.11□□□□□ -0.63
SMARCA2-266ENST00000639760 C12orf43Q96C57 262 aaKnown RBP11.11□□□□□ -0.63
SMARCA2-266ENST00000639760 ARHGEF26Q96DR7 871 aa11.11□□□□□ -0.63
SMARCA2-266ENST00000639760 DCLK3Q9C098 648 aa11.11□□□□□ -0.63
SMARCA2-266ENST00000639760 CDH19Q9H159 772 aa11.11□□□□□ -0.63
SMARCA2-266ENST00000639760 LRRC4BQ9NT99 713 aa11.11□□□□□ -0.63
SMARCA2-266ENST00000639760 HOXC10Q9NYD6 342 aa11.11□□□□□ -0.63
SMARCA2-266ENST00000639760 C6orf203Q9P0P8 240 aaPredicted RBP11.11□□□□□ -0.63
SMARCA2-266ENST00000639760 PPARGC1AQ9UBK2 798 aaKnown RBP11.11□□□□□ -0.63
SMARCA2-266ENST00000639760 EBF1Q9UH73 591 aa11.11□□□□□ -0.63
SMARCA2-266ENST00000639760 POLIQ9UNA4 740 aa11.11□□□□□ -0.63
SMARCA2-266ENST00000639760 B3GNT3Q9Y2A9 372 aa11.11□□□□□ -0.63
SMARCA2-266ENST00000639760 SF3B1O75533 1304 aaKnown RBP eCLIP11.11□□□□□ -0.63
SMARCA2-266ENST00000639760 FAM205AQ6ZU69 1335 aa11.11□□□□□ -0.63
SMARCA2-266ENST00000639760 A0A1B0GTW7 788 aa11.11□□□□□ -0.63
SMARCA2-266ENST00000639760 MEI4A8MW99 385 aa11.11□□□□□ -0.63
SMARCA2-266ENST00000639760 ERVV-2B6SEH9 535 aa11.11□□□□□ -0.63
SMARCA2-266ENST00000639760 CFAP99D6REC4 459 aa11.11□□□□□ -0.63
SMARCA2-266ENST00000639760 CPOXP36551 454 aa11.11□□□□□ -0.63
SMARCA2-266ENST00000639760 MCAMP43121 646 aa11.11□□□□□ -0.63
SMARCA2-266ENST00000639760 IREB2P48200 963 aaKnown RBP11.11□□□□□ -0.63
SMARCA2-266ENST00000639760 RARS2Q5T160 578 aaKnown RBP11.11□□□□□ -0.63
SMARCA2-266ENST00000639760 KAZNQ674X7 775 aa11.11□□□□□ -0.63
SMARCA2-266ENST00000639760 C11orf63Q6NUN7 778 aa11.11□□□□□ -0.63
SMARCA2-266ENST00000639760 SYDE1Q6ZW31 735 aaPredicted RBP11.11□□□□□ -0.63
SMARCA2-266ENST00000639760 CLVS1Q8IUQ0 354 aaPredicted RBP11.11□□□□□ -0.63
SMARCA2-266ENST00000639760 PQLC1Q8N2U9 271 aa11.11□□□□□ -0.63
SMARCA2-266ENST00000639760 UIMC1Q96RL1 719 aa11.11□□□□□ -0.63
SMARCA2-266ENST00000639760 IMPG2Q9BZV3 1241 aa11.11□□□□□ -0.63
SMARCA2-266ENST00000639760 RNF41Q9H4P4 317 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms