RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 DGKZQ13574 1117 aa15.05■□□□□ -0
SCARB2-216ENST00000639300 USP10Q14694 798 aaKnown RBP15.05■□□□□ -0
SCARB2-216ENST00000639300 IRF2BP2Q7Z5L9 587 aa15.05■□□□□ -0
SCARB2-216ENST00000639300 CCDC60Q8IWA6 550 aaPredicted RBP15.05■□□□□ -0
SCARB2-216ENST00000639300 ANLNQ9NQW6 1124 aa15.05■□□□□ -0
SCARB2-216ENST00000639300 SPATS2LQ9NUQ6 558 aaKnown RBP15.05■□□□□ -0
SCARB2-216ENST00000639300 SUN2Q9UH99 717 aa15.05■□□□□ -0
SCARB2-216ENST00000639300 IFT172Q9UG01 1749 aa15.05■□□□□ -0
SCARB2-216ENST00000639300 NFAT5O94916 1531 aa15.05■□□□□ -0
SCARB2-216ENST00000639300 MRC1P22897 1456 aa15.05■□□□□ -0
SCARB2-216ENST00000639300 ACO1P21399 889 aaKnown RBP15.05■□□□□ -0
SCARB2-216ENST00000639300 EEF1B2P24534 225 aaKnown RBP15.05■□□□□ -0
SCARB2-216ENST00000639300 TARSP26639 723 aaKnown RBP15.05■□□□□ -0
SCARB2-216ENST00000639300 EPHB2P29323 1055 aa15.05■□□□□ -0
SCARB2-216ENST00000639300 HNRNPH3P31942 346 aaKnown RBP15.05■□□□□ -0
SCARB2-216ENST00000639300 METTL7BQ6UX53 244 aa15.05■□□□□ -0
SCARB2-216ENST00000639300 RIBC1Q8N443 379 aaPredicted RBP15.05■□□□□ -0
SCARB2-216ENST00000639300 LNX1Q8TBB1 728 aaPredicted RBP15.05■□□□□ -0
SCARB2-216ENST00000639300 MAGEB5Q9BZ81 275 aa15.05■□□□□ -0
SCARB2-216ENST00000639300 DNAJC18Q9H819 358 aa15.05■□□□□ -0
SCARB2-216ENST00000639300 CD248Q9HCU0 757 aa15.05■□□□□ -0
SCARB2-216ENST00000639300 GDF3Q9NR23 364 aa15.05■□□□□ -0
SCARB2-216ENST00000639300 TRIM33Q9UPN9 1127 aa15.05■□□□□ -0
SCARB2-216ENST00000639300 RPS6KA5O75582 802 aa15.04■□□□□ -0
SCARB2-216ENST00000639300 MAPTP10636 758 aaKnown RBP15.04■□□□□ -0
SCARB2-216ENST00000639300 GCNT1Q02742 428 aa15.04■□□□□ -0
SCARB2-216ENST00000639300 RMDN1Q96DB5 314 aa15.04■□□□□ -0
SCARB2-216ENST00000639300 PHTF1Q9UMS5 762 aa15.04■□□□□ -0
SCARB2-216ENST00000639300 PCDHA3Q9Y5H8 950 aa15.04■□□□□ -0
SCARB2-216ENST00000639300 NUMBP49757 651 aa15.04■□□□□ -0
SCARB2-216ENST00000639300 PCSK7Q16549 785 aa15.04■□□□□ -0
SCARB2-216ENST00000639300 DGKDQ16760 1214 aa15.04■□□□□ -0
SCARB2-216ENST00000639300 NOTUMQ6P988 496 aa15.04■□□□□ -0
SCARB2-216ENST00000639300 BTNL9Q6UXG8 535 aa15.04■□□□□ -0
SCARB2-216ENST00000639300 ERO1BQ86YB8 467 aa15.04■□□□□ -0
SCARB2-216ENST00000639300 FAM172AQ8WUF8 416 aa15.04■□□□□ -0
SCARB2-216ENST00000639300 M0QYT0 321 aa15.04■□□□□ -0
SCARB2-216ENST00000639300 NVLO15381 856 aaKnown RBP15.04■□□□□ -0
SCARB2-216ENST00000639300 ADRB2P07550 413 aa15.04■□□□□ -0
SCARB2-216ENST00000639300 INSRRP14616 1297 aa15.04■□□□□ -0
SCARB2-216ENST00000639300 AARSP49588 968 aaKnown RBP eCLIP15.04■□□□□ -0
SCARB2-216ENST00000639300 AP2B1P63010 937 aa15.04■□□□□ -0
SCARB2-216ENST00000639300 CYB5D1Q6P9G0 228 aa15.04■□□□□ -0
SCARB2-216ENST00000639300 MAP4K3Q8IVH8 894 aa15.04■□□□□ -0
SCARB2-216ENST00000639300 E2F7Q96AV8 911 aa15.04■□□□□ -0
SCARB2-216ENST00000639300 FAM129AQ9BZQ8 928 aa15.04■□□□□ -0
SCARB2-216ENST00000639300 USP18Q9UMW8 372 aa15.04■□□□□ -0
SCARB2-216ENST00000639300 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.04■□□□□ -0
SCARB2-216ENST00000639300 RIPK2O43353 540 aa15.04■□□□□ -0
SCARB2-216ENST00000639300 SYF2O95926 243 aaKnown RBP15.04■□□□□ -0
SCARB2-216ENST00000639300 VDRP11473 427 aa15.04■□□□□ -0
SCARB2-216ENST00000639300 ATXN3P54252 364 aaPredicted RBP15.04■□□□□ -0
SCARB2-216ENST00000639300 PDK1Q15118 436 aa15.04■□□□□ -0
SCARB2-216ENST00000639300 CHI3L2Q15782 390 aa15.04■□□□□ -0
SCARB2-216ENST00000639300 TMEM259Q4ZIN3 620 aa15.04■□□□□ -0
SCARB2-216ENST00000639300 VSIG10LQ86VR7 867 aa15.04■□□□□ -0
SCARB2-216ENST00000639300 AGGF1Q8N302 714 aaeCLIP15.04■□□□□ -0
SCARB2-216ENST00000639300 SLC24A3Q9HC58 644 aa15.04■□□□□ -0
SCARB2-216ENST00000639300 DDIT4Q9NX09 232 aa15.04■□□□□ -0
SCARB2-216ENST00000639300 FAF1Q9UNN5 650 aaPredicted RBP15.04■□□□□ -0
SCARB2-216ENST00000639300 TLR2O60603 784 aa15.03■□□□□ -0
SCARB2-216ENST00000639300 DDNO94850 711 aaPredicted RBP15.03■□□□□ -0
SCARB2-216ENST00000639300 CRY2Q49AN0 593 aa15.03■□□□□ -0
SCARB2-216ENST00000639300 PAN2Q504Q3 1202 aaKnown RBP15.03■□□□□ -0
SCARB2-216ENST00000639300 EFHC1Q5JVL4 640 aa15.03■□□□□ -0
SCARB2-216ENST00000639300 MTHFD1LQ6UB35 978 aa15.03■□□□□ -0
SCARB2-216ENST00000639300 C20orf96Q9NUD7 363 aaPredicted RBP15.03■□□□□ -0
SCARB2-216ENST00000639300 HSPA8P11142 646 aaKnown RBP15.03■□□□□ -0
SCARB2-216ENST00000639300 HIC1Q14526 733 aa15.03■□□□□ -0
SCARB2-216ENST00000639300 SPATA2LQ8IUW3 424 aaPredicted RBP15.03■□□□□ -0
SCARB2-216ENST00000639300 WDR49Q8IV35 697 aa15.03■□□□□ -0
SCARB2-216ENST00000639300 TRIML2Q8N7C3 387 aa15.03■□□□□ -0
SCARB2-216ENST00000639300 ZSWIM2Q8NEG5 633 aa15.03■□□□□ -0
SCARB2-216ENST00000639300 IPMKQ8NFU5 416 aa15.03■□□□□ -0
SCARB2-216ENST00000639300 STAMBPL1Q96FJ0 436 aa15.03■□□□□ -0
SCARB2-216ENST00000639300 P2RX7Q99572 595 aaKnown RBP15.03■□□□□ -0
SCARB2-216ENST00000639300 DCLK3Q9C098 648 aa15.03■□□□□ -0
SCARB2-216ENST00000639300 TASP1Q9H6P5 420 aa15.03■□□□□ -0
SCARB2-216ENST00000639300 C10orf88Q9H8K7 445 aa15.03■□□□□ -0
SCARB2-216ENST00000639300 MON2Q7Z3U7 1717 aa15.03■□□□□ -0
SCARB2-216ENST00000639300 SPAG6O75602 509 aa15.03■□□□□ -0
SCARB2-216ENST00000639300 UBOX5O94941 541 aa15.03■□□□□ -0
SCARB2-216ENST00000639300 SCTRP47872 440 aa15.03■□□□□ -0
SCARB2-216ENST00000639300 TAF6P49848 677 aa15.03■□□□□ -0
SCARB2-216ENST00000639300 ESRRGP62508 458 aa15.03■□□□□ -0
SCARB2-216ENST00000639300 C1QBPQ07021 282 aaKnown RBP15.03■□□□□ -0
SCARB2-216ENST00000639300 ZNF235Q14590 738 aa15.03■□□□□ -0
SCARB2-216ENST00000639300 SLC51AQ86UW1 340 aa15.03■□□□□ -0
SCARB2-216ENST00000639300 SGF29Q96ES7 293 aa15.03■□□□□ -0
SCARB2-216ENST00000639300 CNPY3Q9BT09 278 aa15.03■□□□□ -0
SCARB2-216ENST00000639300 PPCSQ9HAB8 311 aa15.03■□□□□ -0
SCARB2-216ENST00000639300 RNF19AQ9NV58 838 aa15.03■□□□□ -0
SCARB2-216ENST00000639300 RPS6KL1Q9Y6S9 549 aa15.03■□□□□ -0
SCARB2-216ENST00000639300 F8VP50 259 aa15.02■□□□□ -0
SCARB2-216ENST00000639300 GSTA4O15217 222 aa15.02■□□□□ -0
SCARB2-216ENST00000639300 SSTR1P30872 391 aa15.02■□□□□ -0
SCARB2-216ENST00000639300 SERPINB9P50453 376 aa15.02■□□□□ -0
SCARB2-216ENST00000639300 CDC42EP1Q00587 391 aa15.02■□□□□ -0
SCARB2-216ENST00000639300 TTMPQ5BVD1 217 aa15.02■□□□□ -0
SCARB2-216ENST00000639300 PTPRN2Q92932 1015 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms