RNA–Protein interactions for RNA: ENST00000638755.1

PAX6-238, Transcript of paired box 6, human

TSL 5 BASIC

Gene PAX6, Length 1,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAX6-238	ENST00000638755	SETD7	Q8WTS6	366 aa	Known RBP	12.71	□□□□□ -0.37
PAX6-238	ENST00000638755	MRPL4	Q9BYD3	311 aa	Known RBP	12.71	□□□□□ -0.37
PAX6-238	ENST00000638755	ZDHHC4	Q9NPG8	344 aa		12.71	□□□□□ -0.37
PAX6-238	ENST00000638755	GJB4	Q9NTQ9	266 aa		12.71	□□□□□ -0.37
PAX6-238	ENST00000638755	FAM149A	A5PLN7	773 aa		12.7	□□□□□ -0.38
PAX6-238	ENST00000638755	CAPN9	O14815	690 aa		12.7	□□□□□ -0.38
PAX6-238	ENST00000638755	ARHGAP6	O43182	974 aa		12.7	□□□□□ -0.38
PAX6-238	ENST00000638755	HMGA1	P17096	107 aa	Known RBP	12.7	□□□□□ -0.38
PAX6-238	ENST00000638755	TYMP	P19971	482 aa		12.7	□□□□□ -0.38
PAX6-238	ENST00000638755	RPS6KB1	P23443	525 aa		12.7	□□□□□ -0.38
PAX6-238	ENST00000638755	AARS	P49588	968 aa	Known RBP eCLIP	12.7	□□□□□ -0.38
PAX6-238	ENST00000638755	GUCY2F	P51841	1108 aa		12.7	□□□□□ -0.38
PAX6-238	ENST00000638755	FAM160A1	Q05DH4	1040 aa		12.7	□□□□□ -0.38
PAX6-238	ENST00000638755	ZNF77	Q15935	545 aa		12.7	□□□□□ -0.38
PAX6-238	ENST00000638755	EMC10	Q5UCC4	262 aa		12.7	□□□□□ -0.38
PAX6-238	ENST00000638755	MPZL3	Q6UWV2	235 aa		12.7	□□□□□ -0.38
PAX6-238	ENST00000638755	ZBTB45	Q96K62	511 aa	Predicted RBP	12.7	□□□□□ -0.38
PAX6-238	ENST00000638755	AGXT2	Q9BYV1	514 aa		12.7	□□□□□ -0.38
PAX6-238	ENST00000638755	TUFT1	Q9NNX1	390 aa		12.7	□□□□□ -0.38
PAX6-238	ENST00000638755	ABI2	Q9NYB9	513 aa	Predicted RBP	12.7	□□□□□ -0.38
PAX6-238	ENST00000638755	PCOLCE2	Q9UKZ9	415 aa		12.7	□□□□□ -0.38
PAX6-238	ENST00000638755	PHLPP2	Q6ZVD8	1323 aa		12.69	□□□□□ -0.38
PAX6-238	ENST00000638755	HELZ	P42694	1942 aa	Known RBP	12.69	□□□□□ -0.38
PAX6-238	ENST00000638755	PLXND1	Q9Y4D7	1925 aa		12.69	□□□□□ -0.38
PAX6-238	ENST00000638755	PYCARD-AS1	I3L0S3	204 aa		12.69	□□□□□ -0.38
PAX6-238	ENST00000638755	ABLIM1	O14639	778 aa		12.69	□□□□□ -0.38
PAX6-238	ENST00000638755	CBFA2T3	O75081	653 aa		12.69	□□□□□ -0.38
PAX6-238	ENST00000638755	CKM	P06732	381 aa		12.69	□□□□□ -0.38
PAX6-238	ENST00000638755	CXCL8	P10145	99 aa		12.69	□□□□□ -0.38
PAX6-238	ENST00000638755	HAPLN1	P10915	354 aa	Predicted RBP	12.69	□□□□□ -0.38
PAX6-238	ENST00000638755	ODC1	P11926	461 aa		12.69	□□□□□ -0.38
PAX6-238	ENST00000638755	LRPAP1	P30533	357 aa		12.69	□□□□□ -0.38
PAX6-238	ENST00000638755	GPR15	P49685	360 aa		12.69	□□□□□ -0.38
PAX6-238	ENST00000638755	STK3	Q13188	491 aa		12.69	□□□□□ -0.38
PAX6-238	ENST00000638755	EOGT	Q5NDL2	527 aa		12.69	□□□□□ -0.38
PAX6-238	ENST00000638755	SLC36A4	Q6YBV0	504 aa		12.69	□□□□□ -0.38
PAX6-238	ENST00000638755	TAS1R3	Q7RTX0	852 aa		12.69	□□□□□ -0.38
PAX6-238	ENST00000638755	GLRX5	Q86SX6	157 aa		12.69	□□□□□ -0.38
PAX6-238	ENST00000638755	RGL4	Q8IZJ4	473 aa		12.69	□□□□□ -0.38
PAX6-238	ENST00000638755	FBXL16	Q8N461	479 aa		12.69	□□□□□ -0.38
PAX6-238	ENST00000638755	KIFAP3	Q92845	792 aa		12.69	□□□□□ -0.38
PAX6-238	ENST00000638755	SENP8	Q96LD8	212 aa		12.69	□□□□□ -0.38
PAX6-238	ENST00000638755	HSPA12B	Q96MM6	686 aa		12.69	□□□□□ -0.38
PAX6-238	ENST00000638755	SLC22A12	Q96S37	553 aa		12.69	□□□□□ -0.38
PAX6-238	ENST00000638755	LARP6	Q9BRS8	491 aa	Known RBP	12.69	□□□□□ -0.38
PAX6-238	ENST00000638755	PRORY	Q9H606	182 aa		12.69	□□□□□ -0.38
PAX6-238	ENST00000638755	KIAA1522	Q9P206	1035 aa	Predicted RBP	12.69	□□□□□ -0.38
PAX6-238	ENST00000638755	OBSL1	O75147	1896 aa		12.68	□□□□□ -0.38
PAX6-238	ENST00000638755	PPEF2	O14830	753 aa		12.68	□□□□□ -0.38
PAX6-238	ENST00000638755	NEMF	O60524	1076 aa		12.68	□□□□□ -0.38
PAX6-238	ENST00000638755	DTNB	O60941	627 aa		12.68	□□□□□ -0.38
PAX6-238	ENST00000638755	NFATC1	O95644	943 aa		12.68	□□□□□ -0.38
PAX6-238	ENST00000638755	USP17L7	P0C7H9	530 aa		12.68	□□□□□ -0.38
PAX6-238	ENST00000638755	ATXN1L	P0C7T5	689 aa	Known RBP	12.68	□□□□□ -0.38
PAX6-238	ENST00000638755	PROZ	P22891	400 aa		12.68	□□□□□ -0.38
PAX6-238	ENST00000638755	SLC6A11	P48066	632 aa		12.68	□□□□□ -0.38
PAX6-238	ENST00000638755	PEX3	P56589	373 aa		12.68	□□□□□ -0.38
PAX6-238	ENST00000638755	EVC	P57679	992 aa		12.68	□□□□□ -0.38
PAX6-238	ENST00000638755	MESP2	Q0VG99	397 aa		12.68	□□□□□ -0.38
PAX6-238	ENST00000638755	USP4	Q13107	963 aa		12.68	□□□□□ -0.38
PAX6-238	ENST00000638755	NR5A1	Q13285	461 aa		12.68	□□□□□ -0.38
PAX6-238	ENST00000638755	CAMK2B	Q13554	666 aa		12.68	□□□□□ -0.38
PAX6-238	ENST00000638755	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	12.68	□□□□□ -0.38
PAX6-238	ENST00000638755	SDHAF4	Q5VUM1	108 aa		12.68	□□□□□ -0.38
PAX6-238	ENST00000638755	SLC41A1	Q8IVJ1	513 aa		12.68	□□□□□ -0.38
PAX6-238	ENST00000638755	TRIML1	Q8N9V2	468 aa		12.68	□□□□□ -0.38
PAX6-238	ENST00000638755	LSM14A	Q8ND56	463 aa	Known RBP	12.68	□□□□□ -0.38
PAX6-238	ENST00000638755	SH3RF2	Q8TEC5	729 aa		12.68	□□□□□ -0.38
PAX6-238	ENST00000638755	YTHDC1	Q96MU7	727 aa	Known RBP	12.68	□□□□□ -0.38
PAX6-238	ENST00000638755	FCRL3	Q96P31	734 aa	Predicted RBP	12.68	□□□□□ -0.38
PAX6-238	ENST00000638755	HNRNPAB	Q99729	332 aa	Known RBP	12.68	□□□□□ -0.38
PAX6-238	ENST00000638755	ZCWPW1	Q9H0M4	648 aa		12.68	□□□□□ -0.38
PAX6-238	ENST00000638755	CLMP	Q9H6B4	373 aa		12.68	□□□□□ -0.38
PAX6-238	ENST00000638755	PRDM16	Q9HAZ2	1276 aa		12.68	□□□□□ -0.38
PAX6-238	ENST00000638755	SNX14	Q9Y5W7	946 aa		12.68	□□□□□ -0.38
PAX6-238	ENST00000638755	PTPRQ	Q9UMZ3	2332 aa		12.67	□□□□□ -0.38
PAX6-238	ENST00000638755	TRAV19	A0A0A6YYK7	116 aa		12.67	□□□□□ -0.38
PAX6-238	ENST00000638755		A0A1W2PQD8	194 aa		12.67	□□□□□ -0.38
PAX6-238	ENST00000638755	MYMK	A6NI61	221 aa		12.67	□□□□□ -0.38
PAX6-238	ENST00000638755	ADAM23	O75077	832 aa		12.67	□□□□□ -0.38
PAX6-238	ENST00000638755	XBP1	P17861	261 aa		12.67	□□□□□ -0.38
PAX6-238	ENST00000638755	NPTX2	P47972	431 aa		12.67	□□□□□ -0.38
PAX6-238	ENST00000638755	LILRA4	P59901	499 aa		12.67	□□□□□ -0.38
PAX6-238	ENST00000638755	CFHR1	Q03591	330 aa		12.67	□□□□□ -0.38
PAX6-238	ENST00000638755	GRIK2	Q13002	908 aa		12.67	□□□□□ -0.38
PAX6-238	ENST00000638755	NOLC1	Q14978	699 aa	Known RBP eCLIP	12.67	□□□□□ -0.38
PAX6-238	ENST00000638755	GAB4	Q2WGN9	574 aa		12.67	□□□□□ -0.38
PAX6-238	ENST00000638755	CCDC157	Q569K6	752 aa		12.67	□□□□□ -0.38
PAX6-238	ENST00000638755	CPLX2	Q6PUV4	134 aa	Known RBP	12.67	□□□□□ -0.38
PAX6-238	ENST00000638755	LRRTM3	Q86VH5	581 aa		12.67	□□□□□ -0.38
PAX6-238	ENST00000638755	GALNT15	Q8N3T1	639 aa		12.67	□□□□□ -0.38
PAX6-238	ENST00000638755	PDCD7	Q8N8D1	485 aa	Known RBP	12.67	□□□□□ -0.38
PAX6-238	ENST00000638755	ARL14EP	Q8N8R7	260 aa	Predicted RBP	12.67	□□□□□ -0.38
PAX6-238	ENST00000638755	SPPL2B	Q8TCT7	592 aa		12.67	□□□□□ -0.38
PAX6-238	ENST00000638755	MTMR9	Q96QG7	549 aa		12.67	□□□□□ -0.38
PAX6-238	ENST00000638755	KIF2C	Q99661	725 aa		12.67	□□□□□ -0.38
PAX6-238	ENST00000638755	TMEM134	Q9H6X4	195 aa		12.67	□□□□□ -0.38
PAX6-238	ENST00000638755	TMEM206	Q9H813	350 aa		12.67	□□□□□ -0.38
PAX6-238	ENST00000638755	TOR4A	Q9NXH8	423 aa		12.67	□□□□□ -0.38
PAX6-238	ENST00000638755	CALCOCO1	Q9P1Z2	691 aa		12.67	□□□□□ -0.38

Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms