RNA–Protein interactions for RNA: ENST00000637033.1

CHRNA7-223, Transcript of cholinergic receptor nicotinic alpha 7 subunit, human

TSL 5 BASIC

Gene CHRNA7, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHRNA7-223	ENST00000637033	TFAP2B	Q92481	460 aa		13.68	□□□□□ -0.22
CHRNA7-223	ENST00000637033	CPT1B	Q92523	772 aa		13.68	□□□□□ -0.22
CHRNA7-223	ENST00000637033	UGT1A7	Q9HAW7	530 aa		13.68	□□□□□ -0.22
CHRNA7-223	ENST00000637033	UGT1A10	Q9HAW8	530 aa		13.68	□□□□□ -0.22
CHRNA7-223	ENST00000637033	UGT1A8	Q9HAW9	530 aa		13.68	□□□□□ -0.22
CHRNA7-223	ENST00000637033	BATF3	Q9NR55	127 aa		13.68	□□□□□ -0.22
CHRNA7-223	ENST00000637033	TBC1D22B	Q9NU19	505 aa		13.68	□□□□□ -0.22
CHRNA7-223	ENST00000637033	IKBKG	Q9Y6K9	419 aa		13.68	□□□□□ -0.22
CHRNA7-223	ENST00000637033	KIF13B	Q9NQT8	1826 aa		13.68	□□□□□ -0.22
CHRNA7-223	ENST00000637033	MEI4	A8MW99	385 aa		13.68	□□□□□ -0.22
CHRNA7-223	ENST00000637033	EGFR	P00533	1210 aa		13.68	□□□□□ -0.22
CHRNA7-223	ENST00000637033	ESRRA	P11474	423 aa	Predicted RBP	13.68	□□□□□ -0.22
CHRNA7-223	ENST00000637033	RPL22	P35268	128 aa	Known RBP	13.68	□□□□□ -0.22
CHRNA7-223	ENST00000637033	GMPR	P36959	345 aa		13.68	□□□□□ -0.22
CHRNA7-223	ENST00000637033	ELK3	P41970	407 aa		13.68	□□□□□ -0.22
CHRNA7-223	ENST00000637033	CDHR3	Q6ZTQ4	885 aa		13.68	□□□□□ -0.22
CHRNA7-223	ENST00000637033	PRPF39	Q86UA1	669 aa	Known RBP	13.68	□□□□□ -0.22
CHRNA7-223	ENST00000637033	KIAA0319L	Q8IZA0	1049 aa		13.68	□□□□□ -0.22
CHRNA7-223	ENST00000637033	ASAP3	Q8TDY4	903 aa		13.68	□□□□□ -0.22
CHRNA7-223	ENST00000637033	USP6NL	Q92738	828 aa		13.68	□□□□□ -0.22
CHRNA7-223	ENST00000637033	VTI1A	Q96AJ9	217 aa		13.68	□□□□□ -0.22
CHRNA7-223	ENST00000637033	MOV10L1	Q9BXT6	1211 aa	Known RBP	13.68	□□□□□ -0.22
CHRNA7-223	ENST00000637033	AVEN	Q9NQS1	362 aa	Predicted RBP	13.68	□□□□□ -0.22
CHRNA7-223	ENST00000637033	HERC5	Q9UII4	1024 aa	Known RBP	13.68	□□□□□ -0.22
CHRNA7-223	ENST00000637033	TBX10	O75333	385 aa		13.68	□□□□□ -0.22
CHRNA7-223	ENST00000637033	GNAT1	P11488	350 aa		13.68	□□□□□ -0.22
CHRNA7-223	ENST00000637033	PTPN4	P29074	926 aa		13.68	□□□□□ -0.22
CHRNA7-223	ENST00000637033	VCP	P55072	806 aa	Known RBP	13.68	□□□□□ -0.22
CHRNA7-223	ENST00000637033	ACVR2B	Q13705	512 aa		13.68	□□□□□ -0.22
CHRNA7-223	ENST00000637033	TMEM132A	Q24JP5	1023 aa		13.68	□□□□□ -0.22
CHRNA7-223	ENST00000637033	SLC27A3	Q5K4L6	730 aa		13.68	□□□□□ -0.22
CHRNA7-223	ENST00000637033	LMNTD2	Q8IXW0	634 aa		13.68	□□□□□ -0.22
CHRNA7-223	ENST00000637033	THNSL1	Q8IYQ7	743 aa		13.68	□□□□□ -0.22
CHRNA7-223	ENST00000637033	NLGN1	Q8N2Q7	840 aa		13.68	□□□□□ -0.22
CHRNA7-223	ENST00000637033	DEPTOR	Q8TB45	409 aa		13.68	□□□□□ -0.22
CHRNA7-223	ENST00000637033	AKT1S1	Q96B36	256 aa		13.68	□□□□□ -0.22
CHRNA7-223	ENST00000637033	NMUR2	Q9GZQ4	415 aa		13.68	□□□□□ -0.22
CHRNA7-223	ENST00000637033	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	13.67	□□□□□ -0.22
CHRNA7-223	ENST00000637033	NVL	O15381	856 aa	Known RBP	13.67	□□□□□ -0.22
CHRNA7-223	ENST00000637033	GJB1	P08034	283 aa		13.67	□□□□□ -0.22
CHRNA7-223	ENST00000637033	NR3C2	P08235	984 aa		13.67	□□□□□ -0.22
CHRNA7-223	ENST00000637033	TFDP3	Q5H9I0	405 aa		13.67	□□□□□ -0.22
CHRNA7-223	ENST00000637033	C4orf50	Q6ZRC1	276 aa		13.67	□□□□□ -0.22
CHRNA7-223	ENST00000637033	CCNJL	Q8IV13	435 aa		13.67	□□□□□ -0.22
CHRNA7-223	ENST00000637033	LARGE2	Q8N3Y3	721 aa		13.67	□□□□□ -0.22
CHRNA7-223	ENST00000637033	TTLL6	Q8N841	843 aa		13.67	□□□□□ -0.22
CHRNA7-223	ENST00000637033	TMC2	Q8TDI7	906 aa		13.67	□□□□□ -0.22
CHRNA7-223	ENST00000637033	PXMP2	Q9NR77	195 aa		13.67	□□□□□ -0.22
CHRNA7-223	ENST00000637033	IP6K2	Q9UHH9	426 aa		13.67	□□□□□ -0.22
CHRNA7-223	ENST00000637033	hCG_1818297	A0A087WSY0	165 aa		13.67	□□□□□ -0.22
CHRNA7-223	ENST00000637033	ALOX15B	O15296	676 aa		13.67	□□□□□ -0.22
CHRNA7-223	ENST00000637033	TCEA3	O75764	348 aa		13.67	□□□□□ -0.22
CHRNA7-223	ENST00000637033	PTGER2	P43116	358 aa		13.67	□□□□□ -0.22
CHRNA7-223	ENST00000637033	ALDH18A1	P54886	795 aa	Known RBP	13.67	□□□□□ -0.22
CHRNA7-223	ENST00000637033	ARL4C	P56559	192 aa		13.67	□□□□□ -0.22
CHRNA7-223	ENST00000637033	PTK7	Q13308	1070 aa		13.67	□□□□□ -0.22
CHRNA7-223	ENST00000637033	PLEKHA7	Q6IQ23	1121 aa		13.67	□□□□□ -0.22
CHRNA7-223	ENST00000637033	FAM160B2	Q86V87	743 aa		13.67	□□□□□ -0.22
CHRNA7-223	ENST00000637033	RCOR2	Q8IZ40	523 aa		13.67	□□□□□ -0.22
CHRNA7-223	ENST00000637033	FAM81B	Q96LP2	452 aa		13.67	□□□□□ -0.22
CHRNA7-223	ENST00000637033	TRIM55	Q9BYV6	548 aa		13.67	□□□□□ -0.22
CHRNA7-223	ENST00000637033	CYP26B1	Q9NR63	512 aa		13.67	□□□□□ -0.22
CHRNA7-223	ENST00000637033	SPATS2L	Q9NUQ6	558 aa	Known RBP	13.67	□□□□□ -0.22
CHRNA7-223	ENST00000637033	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	13.67	□□□□□ -0.22
CHRNA7-223	ENST00000637033	GPATCH2L	Q9NWQ4	482 aa		13.67	□□□□□ -0.22
CHRNA7-223	ENST00000637033	PPARGC1A	Q9UBK2	798 aa	Known RBP	13.67	□□□□□ -0.22
CHRNA7-223	ENST00000637033	SLC9A2	Q9UBY0	812 aa		13.67	□□□□□ -0.22
CHRNA7-223	ENST00000637033	HEY1	Q9Y5J3	304 aa		13.67	□□□□□ -0.22
CHRNA7-223	ENST00000637033	TMEM191C	A6NGB0	347 aa		13.66	□□□□□ -0.22
CHRNA7-223	ENST00000637033	KBTBD13	C9JR72	458 aa		13.66	□□□□□ -0.22
CHRNA7-223	ENST00000637033	EXTL3	O43909	919 aa		13.66	□□□□□ -0.22
CHRNA7-223	ENST00000637033	TMEM191B	P0C7N4	346 aa		13.66	□□□□□ -0.22
CHRNA7-223	ENST00000637033	NEK3	P51956	506 aa		13.66	□□□□□ -0.22
CHRNA7-223	ENST00000637033	PTP4A2	Q12974	167 aa		13.66	□□□□□ -0.22
CHRNA7-223	ENST00000637033	TRAF1	Q13077	416 aa		13.66	□□□□□ -0.22
CHRNA7-223	ENST00000637033	CDCA2	Q69YH5	1023 aa	Predicted RBP	13.66	□□□□□ -0.22
CHRNA7-223	ENST00000637033	ARID3B	Q8IVW6	561 aa	Predicted RBP	13.66	□□□□□ -0.22
CHRNA7-223	ENST00000637033	CEP120	Q8N960	986 aa		13.66	□□□□□ -0.22
CHRNA7-223	ENST00000637033	KCTD6	Q8NC69	237 aa		13.66	□□□□□ -0.22
CHRNA7-223	ENST00000637033	STMN2	Q93045	179 aa		13.66	□□□□□ -0.22
CHRNA7-223	ENST00000637033	TAS2R1	Q9NYW7	299 aa		13.66	□□□□□ -0.22
CHRNA7-223	ENST00000637033	PACSIN3	Q9UKS6	424 aa		13.66	□□□□□ -0.22
CHRNA7-223	ENST00000637033	POLI	Q9UNA4	740 aa		13.66	□□□□□ -0.22
CHRNA7-223	ENST00000637033	SMG5	Q9UPR3	1016 aa	Known RBP	13.66	□□□□□ -0.22
CHRNA7-223	ENST00000637033	SIPA1L1	O43166	1804 aa		13.66	□□□□□ -0.22
CHRNA7-223	ENST00000637033		B2RBV5	119 aa		13.66	□□□□□ -0.22
CHRNA7-223	ENST00000637033	GSC2	O15499	205 aa		13.66	□□□□□ -0.22
CHRNA7-223	ENST00000637033	CDKN2B	P42772	138 aa		13.66	□□□□□ -0.22
CHRNA7-223	ENST00000637033	SCYL2	Q6P3W7	929 aa		13.66	□□□□□ -0.22
CHRNA7-223	ENST00000637033	TEKT4	Q8WW24	435 aa		13.66	□□□□□ -0.22
CHRNA7-223	ENST00000637033	RILP	Q96NA2	401 aa		13.66	□□□□□ -0.22
CHRNA7-223	ENST00000637033	MMP19	Q99542	508 aa		13.66	□□□□□ -0.22
CHRNA7-223	ENST00000637033	TSC22D3	Q99576	134 aa		13.66	□□□□□ -0.22
CHRNA7-223	ENST00000637033	RPAP3	Q9H6T3	665 aa	Predicted RBP	13.66	□□□□□ -0.22
CHRNA7-223	ENST00000637033	SMYD3	Q9H7B4	428 aa		13.66	□□□□□ -0.22
CHRNA7-223	ENST00000637033	RNF146	Q9NTX7	359 aa		13.66	□□□□□ -0.22
CHRNA7-223	ENST00000637033	CORO1C	Q9ULV4	474 aa	Predicted RBP	13.66	□□□□□ -0.22
CHRNA7-223	ENST00000637033	PPP1R12A	O14974	1030 aa	Predicted RBP	13.66	□□□□□ -0.22
CHRNA7-223	ENST00000637033	CHRM1	P11229	460 aa	Predicted RBP	13.66	□□□□□ -0.22
CHRNA7-223	ENST00000637033	BPIFB4	P59827	614 aa		13.66	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms