RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 USTQ9Y2C2 406 aa12.15□□□□□ -0.46
CLN6-217ENST00000636964 TRIP11Q15643 1979 aa12.15□□□□□ -0.46
CLN6-217ENST00000636964 ZSWIM8A7E2V4 1837 aa12.15□□□□□ -0.47
CLN6-217ENST00000636964 TCRBV7S2A1N4TA0A589 114 aa12.14□□□□□ -0.47
CLN6-217ENST00000636964 CA12O43570 354 aa12.14□□□□□ -0.47
CLN6-217ENST00000636964 ATP2C2O75185 946 aa12.14□□□□□ -0.47
CLN6-217ENST00000636964 AKR1A1P14550 325 aa12.14□□□□□ -0.47
CLN6-217ENST00000636964 DARSP14868 501 aaKnown RBP12.14□□□□□ -0.47
CLN6-217ENST00000636964 FLT3P36888 993 aa12.14□□□□□ -0.47
CLN6-217ENST00000636964 ELF3P78545 371 aaPredicted RBP12.14□□□□□ -0.47
CLN6-217ENST00000636964 NAA25Q14CX7 972 aa12.14□□□□□ -0.47
CLN6-217ENST00000636964 CFAP58Q5T655 872 aa12.14□□□□□ -0.47
CLN6-217ENST00000636964 CD101Q93033 1021 aa12.14□□□□□ -0.47
CLN6-217ENST00000636964 KIF9Q9HAQ2 790 aa12.14□□□□□ -0.47
CLN6-217ENST00000636964 LAMA3Q16787 3333 aa12.14□□□□□ -0.47
CLN6-217ENST00000636964 ZNF236Q9UL36 1845 aa12.14□□□□□ -0.47
CLN6-217ENST00000636964 DCDC2CA8MYV0 355 aa12.14□□□□□ -0.47
CLN6-217ENST00000636964 H0YGN5 161 aa12.14□□□□□ -0.47
CLN6-217ENST00000636964 HAS3O00219 553 aa12.14□□□□□ -0.47
CLN6-217ENST00000636964 O00370 1275 aa12.14□□□□□ -0.47
CLN6-217ENST00000636964 PPEF2O14830 753 aa12.14□□□□□ -0.47
CLN6-217ENST00000636964 TRAPPC3O43617 180 aa12.14□□□□□ -0.47
CLN6-217ENST00000636964 AOC2O75106 756 aa12.14□□□□□ -0.47
CLN6-217ENST00000636964 ATP6V1G2O95670 118 aa12.14□□□□□ -0.47
CLN6-217ENST00000636964 GJC1P36383 396 aa12.14□□□□□ -0.47
CLN6-217ENST00000636964 RPL7AP62424 266 aaKnown RBP12.14□□□□□ -0.47
CLN6-217ENST00000636964 ADAM17P78536 824 aa12.14□□□□□ -0.47
CLN6-217ENST00000636964 PURAQ00577 322 aaKnown RBP12.14□□□□□ -0.47
CLN6-217ENST00000636964 MAMLD1Q13495 774 aa12.14□□□□□ -0.47
CLN6-217ENST00000636964 GLE1Q53GS7 698 aaKnown RBP12.14□□□□□ -0.47
CLN6-217ENST00000636964 CYP4A22Q5TCH4 519 aa12.14□□□□□ -0.47
CLN6-217ENST00000636964 LIN9Q5TKA1 542 aa12.14□□□□□ -0.47
CLN6-217ENST00000636964 CCDC121Q6ZUS5 278 aa12.14□□□□□ -0.47
CLN6-217ENST00000636964 WDTC1Q8N5D0 677 aa12.14□□□□□ -0.47
CLN6-217ENST00000636964 C18orf25Q96B23 403 aaPredicted RBP12.14□□□□□ -0.47
CLN6-217ENST00000636964 TBC1D31Q96DN5 1066 aa12.14□□□□□ -0.47
CLN6-217ENST00000636964 SEC16BQ96JE7 1060 aa12.14□□□□□ -0.47
CLN6-217ENST00000636964 WNT8AQ9H1J5 351 aa12.14□□□□□ -0.47
CLN6-217ENST00000636964 NFS1Q9Y697 457 aa12.14□□□□□ -0.47
CLN6-217ENST00000636964 C17orf102A2RUQ5 167 aa12.14□□□□□ -0.47
CLN6-217ENST00000636964 MIF4GDA9UHW6 222 aaKnown RBP12.14□□□□□ -0.47
CLN6-217ENST00000636964 PYGBP11216 843 aa12.14□□□□□ -0.47
CLN6-217ENST00000636964 PTP4A2Q12974 167 aa12.14□□□□□ -0.47
CLN6-217ENST00000636964 SNX17Q15036 470 aa12.14□□□□□ -0.47
CLN6-217ENST00000636964 UAP1Q16222 522 aaPredicted RBP12.14□□□□□ -0.47
CLN6-217ENST00000636964 LACTB2Q53H82 288 aaPredicted RBP12.14□□□□□ -0.47
CLN6-217ENST00000636964 TMCO4Q5TGY1 634 aa12.14□□□□□ -0.47
CLN6-217ENST00000636964 DENND1BQ6P3S1 775 aa12.14□□□□□ -0.47
CLN6-217ENST00000636964 SLC27A1Q6PCB7 646 aa12.14□□□□□ -0.47
CLN6-217ENST00000636964 TRIM72Q6ZMU5 477 aa12.14□□□□□ -0.47
CLN6-217ENST00000636964 IFT20Q8IY31 132 aa12.14□□□□□ -0.47
CLN6-217ENST00000636964 MREGQ8N565 214 aa12.14□□□□□ -0.47
CLN6-217ENST00000636964 C3orf20Q8ND61 904 aa12.14□□□□□ -0.47
CLN6-217ENST00000636964 CCT6BQ92526 530 aa12.14□□□□□ -0.47
CLN6-217ENST00000636964 SLX1AQ9BQ83 275 aa12.14□□□□□ -0.47
CLN6-217ENST00000636964 TRIM31Q9BZY9 425 aa12.14□□□□□ -0.47
CLN6-217ENST00000636964 ACTR5Q9H9F9 607 aaPredicted RBP12.14□□□□□ -0.47
CLN6-217ENST00000636964 TMBIM4Q9HC24 238 aa12.14□□□□□ -0.47
CLN6-217ENST00000636964 TJP2Q9UDY2 1190 aa12.14□□□□□ -0.47
CLN6-217ENST00000636964 HTTP42858 3142 aa12.13□□□□□ -0.47
CLN6-217ENST00000636964 TTI1O43156 1089 aa12.13□□□□□ -0.47
CLN6-217ENST00000636964 PECAM1P16284 738 aaPredicted RBP12.13□□□□□ -0.47
CLN6-217ENST00000636964 ECHS1P30084 290 aa12.13□□□□□ -0.47
CLN6-217ENST00000636964 GRM5P41594 1212 aa12.13□□□□□ -0.47
CLN6-217ENST00000636964 RANBP1P43487 201 aa12.13□□□□□ -0.47
CLN6-217ENST00000636964 TM4SF4P48230 202 aa12.13□□□□□ -0.47
CLN6-217ENST00000636964 CDR1P51861 262 aa12.13□□□□□ -0.47
CLN6-217ENST00000636964 RAD23BP54727 409 aa12.13□□□□□ -0.47
CLN6-217ENST00000636964 PRKCZQ05513 592 aa12.13□□□□□ -0.47
CLN6-217ENST00000636964 ZDHHC14Q8IZN3 488 aa12.13□□□□□ -0.47
CLN6-217ENST00000636964 TTC30BQ8N4P2 665 aa12.13□□□□□ -0.47
CLN6-217ENST00000636964 RNF39Q9H2S5 420 aa12.13□□□□□ -0.47
CLN6-217ENST00000636964 TLR3O15455 904 aaKnown RBP12.13□□□□□ -0.47
CLN6-217ENST00000636964 FAM47CQ5HY64 1035 aa12.13□□□□□ -0.47
CLN6-217ENST00000636964 NOTUMQ6P988 496 aa12.13□□□□□ -0.47
CLN6-217ENST00000636964 PHF13Q86YI8 300 aaPredicted RBP12.13□□□□□ -0.47
CLN6-217ENST00000636964 WHAMMQ8TF30 809 aa12.13□□□□□ -0.47
CLN6-217ENST00000636964 BCO2Q9BYV7 579 aa12.13□□□□□ -0.47
CLN6-217ENST00000636964 ELOVL4Q9GZR5 314 aa12.13□□□□□ -0.47
CLN6-217ENST00000636964 EBF2Q9HAK2 575 aa12.13□□□□□ -0.47
CLN6-217ENST00000636964 NOD2Q9HC29 1040 aa12.13□□□□□ -0.47
CLN6-217ENST00000636964 AVENQ9NQS1 362 aaPredicted RBP12.13□□□□□ -0.47
CLN6-217ENST00000636964 UTP6Q9NYH9 597 aaKnown RBP12.13□□□□□ -0.47
CLN6-217ENST00000636964 TUBGCP4Q9UGJ1 667 aa12.13□□□□□ -0.47
CLN6-217ENST00000636964 PLAAQ9Y263 795 aa12.13□□□□□ -0.47
CLN6-217ENST00000636964 PCDHA3Q9Y5H8 950 aa12.13□□□□□ -0.47
CLN6-217ENST00000636964 CITO14578 2027 aa12.13□□□□□ -0.47
CLN6-217ENST00000636964 GMNCA6NCL1 334 aa12.13□□□□□ -0.47
CLN6-217ENST00000636964 C5orf60A6NFR6 353 aa12.13□□□□□ -0.47
CLN6-217ENST00000636964 MYBL1P10243 752 aa12.13□□□□□ -0.47
CLN6-217ENST00000636964 EZRP15311 586 aaKnown RBP12.13□□□□□ -0.47
CLN6-217ENST00000636964 PEX19P40855 299 aa12.13□□□□□ -0.47
CLN6-217ENST00000636964 FCGRTP55899 365 aa12.13□□□□□ -0.47
CLN6-217ENST00000636964 SESTD1Q86VW0 696 aa12.13□□□□□ -0.47
CLN6-217ENST00000636964 NSMCE1Q8WV22 266 aa12.13□□□□□ -0.47
CLN6-217ENST00000636964 TRIM11Q96F44 468 aa12.13□□□□□ -0.47
CLN6-217ENST00000636964 TRIM51Q9BSJ1 452 aa12.13□□□□□ -0.47
CLN6-217ENST00000636964 ITM2BQ9Y287 266 aa12.13□□□□□ -0.47
CLN6-217ENST00000636964 L3MBTL1Q9Y468 752 aa12.13□□□□□ -0.47
CLN6-217ENST00000636964 RECQL4O94761 1208 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms