RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 B3GNT5Q9BYG0 378 aa17.01■□□□□ 0.31
CLN6-216ENST00000636876 CRISPLD1Q9H336 500 aa17.01■□□□□ 0.31
CLN6-216ENST00000636876 CYP4F11Q9HBI6 524 aa17.01■□□□□ 0.31
CLN6-216ENST00000636876 ABCB6Q9NP58 842 aa17.01■□□□□ 0.31
CLN6-216ENST00000636876 FAM49BQ9NUQ9 324 aa17.01■□□□□ 0.31
CLN6-216ENST00000636876 DZANK1Q9NVP4 752 aa17.01■□□□□ 0.31
CLN6-216ENST00000636876 HSFX1Q9UBD0 423 aa17.01■□□□□ 0.31
CLN6-216ENST00000636876 F8VZ95 297 aa17■□□□□ 0.31
CLN6-216ENST00000636876 PRRG1O14668 218 aa17■□□□□ 0.31
CLN6-216ENST00000636876 PNMA6AP0CW24 399 aaPredicted RBP17■□□□□ 0.31
CLN6-216ENST00000636876 SRGAP2BP0DMP2 458 aa17■□□□□ 0.31
CLN6-216ENST00000636876 CCDC130P13994 396 aa17■□□□□ 0.31
CLN6-216ENST00000636876 MAGEA11P43364 429 aa17■□□□□ 0.31
CLN6-216ENST00000636876 JAM2P57087 298 aa17■□□□□ 0.31
CLN6-216ENST00000636876 CYP27A1Q02318 531 aa17■□□□□ 0.31
CLN6-216ENST00000636876 DUSP4Q13115 394 aa17■□□□□ 0.31
CLN6-216ENST00000636876 CFAP221Q4G0U5 840 aa17■□□□□ 0.31
CLN6-216ENST00000636876 FIGNQ5HY92 759 aa17■□□□□ 0.31
CLN6-216ENST00000636876 CCDC149Q6ZUS6 474 aa17■□□□□ 0.31
CLN6-216ENST00000636876 RTL10Q7L3V2 364 aa17■□□□□ 0.31
CLN6-216ENST00000636876 CACNA2D4Q7Z3S7 1137 aa17■□□□□ 0.31
CLN6-216ENST00000636876 PABPC5Q96DU9 382 aaKnown RBP17■□□□□ 0.31
CLN6-216ENST00000636876 SPAG5Q96R06 1193 aa17■□□□□ 0.31
CLN6-216ENST00000636876 NUP58Q9BVL2 599 aa17■□□□□ 0.31
CLN6-216ENST00000636876 EDEM3Q9BZQ6 932 aa17■□□□□ 0.31
CLN6-216ENST00000636876 TTYH3Q9C0H2 523 aa17■□□□□ 0.31
CLN6-216ENST00000636876 CLDND1Q9NY35 253 aa17■□□□□ 0.31
CLN6-216ENST00000636876 KIAA1257Q9ULG3 409 aa17■□□□□ 0.31
CLN6-216ENST00000636876 ATP8B3O60423 1300 aa16.99■□□□□ 0.31
CLN6-216ENST00000636876 ITIH6Q6UXX5 1313 aa16.99■□□□□ 0.31
CLN6-216ENST00000636876 CLDN5O00501 218 aa16.99■□□□□ 0.31
CLN6-216ENST00000636876 CYP26A1O43174 497 aa16.99■□□□□ 0.31
CLN6-216ENST00000636876 ZMYND10O75800 440 aa16.99■□□□□ 0.31
CLN6-216ENST00000636876 C8AP07357 584 aa16.99■□□□□ 0.31
CLN6-216ENST00000636876 HAPLN1P10915 354 aaPredicted RBP16.99■□□□□ 0.31
CLN6-216ENST00000636876 VDRP11473 427 aa16.99■□□□□ 0.31
CLN6-216ENST00000636876 CD19P15391 556 aa16.99■□□□□ 0.31
CLN6-216ENST00000636876 BDNFP23560 247 aa16.99■□□□□ 0.31
CLN6-216ENST00000636876 CYP2F1P24903 491 aa16.99■□□□□ 0.31
CLN6-216ENST00000636876 ZNF75DP51815 510 aa16.99■□□□□ 0.31
CLN6-216ENST00000636876 SGO2Q562F6 1265 aa16.99■□□□□ 0.31
CLN6-216ENST00000636876 ARHGAP17Q68EM7 881 aa16.99■□□□□ 0.31
CLN6-216ENST00000636876 PAQR9Q6ZVX9 377 aa16.99■□□□□ 0.31
CLN6-216ENST00000636876 FAM35AQ86V20 835 aa16.99■□□□□ 0.31
CLN6-216ENST00000636876 VSTM4Q8IW00 320 aa16.99■□□□□ 0.31
CLN6-216ENST00000636876 FUKQ8N0W3 1084 aa16.99■□□□□ 0.31
CLN6-216ENST00000636876 SLC7A14Q8TBB6 771 aa16.99■□□□□ 0.31
CLN6-216ENST00000636876 SLC2A14Q8TDB8 520 aa16.99■□□□□ 0.31
CLN6-216ENST00000636876 PPM1EQ8WY54 764 aa16.99■□□□□ 0.31
CLN6-216ENST00000636876 BAP1Q92560 729 aa16.99■□□□□ 0.31
CLN6-216ENST00000636876 IQCDQ96DY2 449 aa16.99■□□□□ 0.31
CLN6-216ENST00000636876 CYFIP2Q96F07 1278 aa16.99■□□□□ 0.31
CLN6-216ENST00000636876 HNRNPABQ99729 332 aaKnown RBP16.99■□□□□ 0.31
CLN6-216ENST00000636876 MED10Q9BTT4 135 aa16.99■□□□□ 0.31
CLN6-216ENST00000636876 RHOBTB2Q9BYZ6 727 aa16.99■□□□□ 0.31
CLN6-216ENST00000636876 ZNF518BQ9C0D4 1074 aa16.99■□□□□ 0.31
CLN6-216ENST00000636876 SLC27A5Q9Y2P5 690 aa16.99■□□□□ 0.31
CLN6-216ENST00000636876 YIPF1Q9Y548 306 aa16.99■□□□□ 0.31
CLN6-216ENST00000636876 INSL5Q9Y5Q6 135 aa16.99■□□□□ 0.31
CLN6-216ENST00000636876 PTPRDP23468 1912 aa16.99■□□□□ 0.31
CLN6-216ENST00000636876 TBX10O75333 385 aa16.98■□□□□ 0.31
CLN6-216ENST00000636876 CALCAP01258 141 aa16.98■□□□□ 0.31
CLN6-216ENST00000636876 CLCN1P35523 988 aa16.98■□□□□ 0.31
CLN6-216ENST00000636876 SOX5P35711 763 aa16.98■□□□□ 0.31
CLN6-216ENST00000636876 STAT1P42224 750 aa16.98■□□□□ 0.31
CLN6-216ENST00000636876 TUFMP49411 452 aaKnown RBP16.98■□□□□ 0.31
CLN6-216ENST00000636876 MGAT5BQ3V5L5 792 aa16.98■□□□□ 0.31
CLN6-216ENST00000636876 PPP1R26Q5T8A7 1209 aaPredicted RBP16.98■□□□□ 0.31
CLN6-216ENST00000636876 SPECC1LQ69YQ0 1117 aa16.98■□□□□ 0.31
CLN6-216ENST00000636876 ANKRD54Q6NXT1 300 aa16.98■□□□□ 0.31
CLN6-216ENST00000636876 VSTM1Q6UX27 236 aa16.98■□□□□ 0.31
CLN6-216ENST00000636876 TFAP2BQ92481 460 aa16.98■□□□□ 0.31
CLN6-216ENST00000636876 SEPT5Q99719 369 aaPredicted RBP16.98■□□□□ 0.31
CLN6-216ENST00000636876 ZDHHC7Q9NXF8 308 aa16.98■□□□□ 0.31
CLN6-216ENST00000636876 MYO6Q9UM54 1294 aa16.98■□□□□ 0.31
CLN6-216ENST00000636876 TCF20Q9UGU0 1960 aaKnown RBP16.97■□□□□ 0.31
CLN6-216ENST00000636876 A0A1W2PQJ5 194 aa16.97■□□□□ 0.31
CLN6-216ENST00000636876 SPDYE4A6NLX3 237 aa16.97■□□□□ 0.31
CLN6-216ENST00000636876 O00370 1275 aa16.97■□□□□ 0.31
CLN6-216ENST00000636876 SOAT2O75908 522 aa16.97■□□□□ 0.31
CLN6-216ENST00000636876 HNRNPA1P09651 372 aaKnown RBP eCLIP16.97■□□□□ 0.31
CLN6-216ENST00000636876 HOXB8P17481 243 aaPredicted RBP16.97■□□□□ 0.31
CLN6-216ENST00000636876 BRD2P25440 801 aaKnown RBP16.97■□□□□ 0.31
CLN6-216ENST00000636876 ADORA2BP29275 332 aa16.97■□□□□ 0.31
CLN6-216ENST00000636876 GNA15P30679 374 aa16.97■□□□□ 0.31
CLN6-216ENST00000636876 HOXA9P31269 272 aa16.97■□□□□ 0.31
CLN6-216ENST00000636876 LTBRP36941 435 aa16.97■□□□□ 0.31
CLN6-216ENST00000636876 BPIFB4P59827 614 aa16.97■□□□□ 0.31
CLN6-216ENST00000636876 PTK2Q05397 1052 aa16.97■□□□□ 0.31
CLN6-216ENST00000636876 SKIV2LQ15477 1246 aaKnown RBP16.97■□□□□ 0.31
CLN6-216ENST00000636876 PPM1LQ5SGD2 360 aa16.97■□□□□ 0.31
CLN6-216ENST00000636876 EP400NLQ6ZTU2 488 aa16.97■□□□□ 0.31
CLN6-216ENST00000636876 CMASQ8NFW8 434 aaPredicted RBP16.97■□□□□ 0.31
CLN6-216ENST00000636876 SMARCD1Q96GM5 515 aa16.97■□□□□ 0.31
CLN6-216ENST00000636876 MRFAP1L1Q96HT8 127 aa16.97■□□□□ 0.31
CLN6-216ENST00000636876 ZSWIM1Q9BR11 485 aa16.97■□□□□ 0.31
CLN6-216ENST00000636876 SFXN1Q9H9B4 322 aa16.97■□□□□ 0.31
CLN6-216ENST00000636876 ACP6Q9NPH0 428 aa16.97■□□□□ 0.31
CLN6-216ENST00000636876 CLEC1BQ9P126 229 aa16.97■□□□□ 0.31
CLN6-216ENST00000636876 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms