RNA–Protein interactions for RNA: ENST00000636759.1

SCN1A-213, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 3,606 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-213ENST00000636759 LILRB4Q8NHJ6 448 aa7.15□□□□□ -1.26
SCN1A-213ENST00000636759 ACMSDQ8TDX5 336 aa7.15□□□□□ -1.26
SCN1A-213ENST00000636759 PANX3Q96QZ0 392 aa7.15□□□□□ -1.26
SCN1A-213ENST00000636759 CRAMP1Q96RY5 1269 aa7.15□□□□□ -1.26
SCN1A-213ENST00000636759 CCSER1Q9C0I3 900 aa7.15□□□□□ -1.26
SCN1A-213ENST00000636759 RIC8AQ9NPQ8 531 aa7.15□□□□□ -1.26
SCN1A-213ENST00000636759 DISC1Q9NRI5 854 aa7.15□□□□□ -1.26
SCN1A-213ENST00000636759 DDX56Q9NY93 547 aaKnown RBP7.15□□□□□ -1.26
SCN1A-213ENST00000636759 GPRC5DQ9NZD1 345 aa7.15□□□□□ -1.26
SCN1A-213ENST00000636759 EPS15L1Q9UBC2 864 aa7.15□□□□□ -1.26
SCN1A-213ENST00000636759 ASIC3Q9UHC3 531 aa7.15□□□□□ -1.26
SCN1A-213ENST00000636759 HEMK1Q9Y5R4 338 aaPredicted RBP7.15□□□□□ -1.26
SCN1A-213ENST00000636759 CEPT1Q9Y6K0 416 aa7.15□□□□□ -1.26
SCN1A-213ENST00000636759 SNED1Q8TER0 1413 aa7.15□□□□□ -1.26
SCN1A-213ENST00000636759 RGPD3A6NKT7 1758 aaPredicted RBP7.15□□□□□ -1.27
SCN1A-213ENST00000636759 RGPD4Q7Z3J3 1758 aa7.15□□□□□ -1.27
SCN1A-213ENST00000636759 XPO1O14980 1071 aaKnown RBP7.15□□□□□ -1.27
SCN1A-213ENST00000636759 CRYZL1O95825 349 aa7.15□□□□□ -1.27
SCN1A-213ENST00000636759 P4HA1P13674 534 aa7.15□□□□□ -1.27
SCN1A-213ENST00000636759 CCDC130P13994 396 aa7.15□□□□□ -1.27
SCN1A-213ENST00000636759 MUTP22033 750 aa7.15□□□□□ -1.27
SCN1A-213ENST00000636759 LONP1P36776 959 aaKnown RBP7.15□□□□□ -1.27
SCN1A-213ENST00000636759 IST1P53990 364 aa7.15□□□□□ -1.27
SCN1A-213ENST00000636759 ZNF200P98182 395 aaPredicted RBP7.15□□□□□ -1.27
SCN1A-213ENST00000636759 OVGP1Q12889 678 aa7.15□□□□□ -1.27
SCN1A-213ENST00000636759 ZNF211Q13398 564 aaPredicted RBP7.15□□□□□ -1.27
SCN1A-213ENST00000636759 SF3B4Q15427 424 aaKnown RBP eCLIP7.15□□□□□ -1.27
SCN1A-213ENST00000636759 TJAP1Q5JTD0 557 aa7.15□□□□□ -1.27
SCN1A-213ENST00000636759 OGFOD2Q6N063 350 aa7.15□□□□□ -1.27
SCN1A-213ENST00000636759 DHRS4L2Q6PKH6 230 aa7.15□□□□□ -1.27
SCN1A-213ENST00000636759 TMC5Q6UXY8 1006 aa7.15□□□□□ -1.27
SCN1A-213ENST00000636759 C4orf22Q6V702 233 aa7.15□□□□□ -1.27
SCN1A-213ENST00000636759 MFSD6Q6ZSS7 791 aa7.15□□□□□ -1.27
SCN1A-213ENST00000636759 CYP2U1Q7Z449 544 aa7.15□□□□□ -1.27
SCN1A-213ENST00000636759 HIPK4Q8NE63 616 aa7.15□□□□□ -1.27
SCN1A-213ENST00000636759 GIPC2Q8TF65 315 aa7.15□□□□□ -1.27
SCN1A-213ENST00000636759 CHPT1Q8WUD6 406 aa7.15□□□□□ -1.27
SCN1A-213ENST00000636759 TAMM41Q96BW9 452 aa7.15□□□□□ -1.27
SCN1A-213ENST00000636759 C18orf8Q96DM3 657 aa7.15□□□□□ -1.27
SCN1A-213ENST00000636759 BRIP1Q9BX63 1249 aa7.15□□□□□ -1.27
SCN1A-213ENST00000636759 IMPG2Q9BZV3 1241 aa7.15□□□□□ -1.27
SCN1A-213ENST00000636759 RNF38Q9H0F5 515 aa7.15□□□□□ -1.27
SCN1A-213ENST00000636759 ANLNQ9NQW6 1124 aa7.15□□□□□ -1.27
SCN1A-213ENST00000636759 IGSF9Q9P2J2 1179 aa7.15□□□□□ -1.27
SCN1A-213ENST00000636759 CCNL1Q9UK58 526 aaPredicted RBP7.15□□□□□ -1.27
SCN1A-213ENST00000636759 IFT52Q9Y366 437 aa7.15□□□□□ -1.27
SCN1A-213ENST00000636759 TMCC2O75069 709 aa7.14□□□□□ -1.27
SCN1A-213ENST00000636759 GUCY1B2O75343 617 aa7.14□□□□□ -1.27
SCN1A-213ENST00000636759 TTC4O95801 387 aa7.14□□□□□ -1.27
SCN1A-213ENST00000636759 BDNFP23560 247 aa7.14□□□□□ -1.27
SCN1A-213ENST00000636759 ACADSBP45954 432 aa7.14□□□□□ -1.27
SCN1A-213ENST00000636759 TFAP4Q01664 338 aa7.14□□□□□ -1.27
SCN1A-213ENST00000636759 RALGDSQ12967 914 aa7.14□□□□□ -1.27
SCN1A-213ENST00000636759 STAT4Q14765 748 aa7.14□□□□□ -1.27
SCN1A-213ENST00000636759 NONOQ15233 471 aaKnown RBP eCLIP7.14□□□□□ -1.27
SCN1A-213ENST00000636759 SHROOM1Q2M3G4 852 aaPredicted RBP7.14□□□□□ -1.27
SCN1A-213ENST00000636759 EFHC1Q5JVL4 640 aa7.14□□□□□ -1.27
SCN1A-213ENST00000636759 CCDC137Q6PK04 289 aaKnown RBP7.14□□□□□ -1.27
SCN1A-213ENST00000636759 CYFIP1Q7L576 1253 aa7.14□□□□□ -1.27
SCN1A-213ENST00000636759 NT5DC3Q86UY8 548 aa7.14□□□□□ -1.27
SCN1A-213ENST00000636759 DCLK2Q8N568 766 aa7.14□□□□□ -1.27
SCN1A-213ENST00000636759 HELQQ8TDG4 1101 aa7.14□□□□□ -1.27
SCN1A-213ENST00000636759 SGF29Q96ES7 293 aa7.14□□□□□ -1.27
SCN1A-213ENST00000636759 ZSCAN10Q96SZ4 725 aaPredicted RBP7.14□□□□□ -1.27
SCN1A-213ENST00000636759 RBM15Q96T37 977 aaKnown RBP eCLIP7.14□□□□□ -1.27
SCN1A-213ENST00000636759 TRABDQ9H4I3 376 aa7.14□□□□□ -1.27
SCN1A-213ENST00000636759 ZNF696Q9H7X3 374 aa7.14□□□□□ -1.27
SCN1A-213ENST00000636759 SIAEQ9HAT2 523 aa7.14□□□□□ -1.27
SCN1A-213ENST00000636759 LRRC4BQ9NT99 713 aa7.14□□□□□ -1.27
SCN1A-213ENST00000636759 SLC38A7Q9NVC3 462 aa7.14□□□□□ -1.27
SCN1A-213ENST00000636759 CRNNQ9UBG3 495 aaPredicted RBP7.14□□□□□ -1.27
SCN1A-213ENST00000636759 GNPTGQ9UJJ9 305 aa7.14□□□□□ -1.27
SCN1A-213ENST00000636759 CYP2D7A0A087X1C5 515 aa7.14□□□□□ -1.27
SCN1A-213ENST00000636759 CAPN8A6NHC0 703 aa7.14□□□□□ -1.27
SCN1A-213ENST00000636759 SOBPA7XYQ1 873 aa7.14□□□□□ -1.27
SCN1A-213ENST00000636759 CFAP99D6REC4 459 aa7.14□□□□□ -1.27
SCN1A-213ENST00000636759 TLR2O60603 784 aa7.14□□□□□ -1.27
SCN1A-213ENST00000636759 IL4RP24394 825 aa7.14□□□□□ -1.27
SCN1A-213ENST00000636759 S100A5P33763 92 aa7.14□□□□□ -1.27
SCN1A-213ENST00000636759 GYG1P46976 350 aa7.14□□□□□ -1.27
SCN1A-213ENST00000636759 CDK16Q00536 496 aa7.14□□□□□ -1.27
SCN1A-213ENST00000636759 AMPD3Q01432 767 aa7.14□□□□□ -1.27
SCN1A-213ENST00000636759 KDSRQ06136 332 aa7.14□□□□□ -1.27
SCN1A-213ENST00000636759 TIGD2Q4W5G0 525 aa7.14□□□□□ -1.27
SCN1A-213ENST00000636759 COBLL1Q53SF7 1204 aa7.14□□□□□ -1.27
SCN1A-213ENST00000636759 SEL1L2Q5TEA6 688 aa7.14□□□□□ -1.27
SCN1A-213ENST00000636759 TUBA3EQ6PEY2 450 aa7.14□□□□□ -1.27
SCN1A-213ENST00000636759 TPTE2Q6XPS3 522 aa7.14□□□□□ -1.27
SCN1A-213ENST00000636759 FRA10AC1Q70Z53 315 aa7.14□□□□□ -1.27
SCN1A-213ENST00000636759 SDR42E1Q8WUS8 393 aa7.14□□□□□ -1.27
SCN1A-213ENST00000636759 ZNF75CPQ92670 426 aaPredicted RBP7.14□□□□□ -1.27
SCN1A-213ENST00000636759 CLPTM1LQ96KA5 538 aa7.14□□□□□ -1.27
SCN1A-213ENST00000636759 SMYD3Q9H7B4 428 aa7.14□□□□□ -1.27
SCN1A-213ENST00000636759 CAAP1Q9H8G2 361 aa7.14□□□□□ -1.27
SCN1A-213ENST00000636759 AS3MTQ9HBK9 375 aa7.14□□□□□ -1.27
SCN1A-213ENST00000636759 FBXO6Q9NRD1 293 aaPredicted RBP7.14□□□□□ -1.27
SCN1A-213ENST00000636759 SLC7A8Q9UHI5 535 aa7.14□□□□□ -1.27
SCN1A-213ENST00000636759 PCDHGA3Q9Y5H0 932 aa7.14□□□□□ -1.27
SCN1A-213ENST00000636759 ZSCAN5BA6NJL1 495 aa7.14□□□□□ -1.27
SCN1A-213ENST00000636759 FCHO1O14526 889 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms