RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 NBPF9Q3BBW0 867 aa18.54■□□□□ 0.56
CACNA1A-227ENST00000636549 TRIM65Q6PJ69 517 aa18.54■□□□□ 0.56
CACNA1A-227ENST00000636549 ACOT1Q86TX2 421 aa18.54■□□□□ 0.56
CACNA1A-227ENST00000636549 COPG1Q9Y678 874 aaKnown RBP18.54■□□□□ 0.56
CACNA1A-227ENST00000636549 CNTNAP2Q9UHC6 1331 aa18.54■□□□□ 0.56
CACNA1A-227ENST00000636549 VWA5AO00534 786 aa18.54■□□□□ 0.56
CACNA1A-227ENST00000636549 STX7O15400 261 aaKnown RBP18.54■□□□□ 0.56
CACNA1A-227ENST00000636549 CTSEP14091 401 aa18.54■□□□□ 0.56
CACNA1A-227ENST00000636549 SLC11A2P49281 568 aa18.54■□□□□ 0.56
CACNA1A-227ENST00000636549 KCNK10P57789 538 aa18.54■□□□□ 0.56
CACNA1A-227ENST00000636549 KYNUQ16719 465 aa18.54■□□□□ 0.56
CACNA1A-227ENST00000636549 TRIM71Q2Q1W2 868 aaKnown RBP18.54■□□□□ 0.56
CACNA1A-227ENST00000636549 PDGFDQ9GZP0 370 aaPredicted RBP18.54■□□□□ 0.56
CACNA1A-227ENST00000636549 MAPKBP1O60336 1514 aa18.54■□□□□ 0.56
CACNA1A-227ENST00000636549 RGS12O14924 1447 aa18.54■□□□□ 0.56
CACNA1A-227ENST00000636549 ITGAXP20702 1163 aa18.54■□□□□ 0.56
CACNA1A-227ENST00000636549 RHOBTB2Q9BYZ6 727 aa18.54■□□□□ 0.56
CACNA1A-227ENST00000636549 DDIT4Q9NX09 232 aa18.54■□□□□ 0.56
CACNA1A-227ENST00000636549 COQ6Q9Y2Z9 468 aa18.54■□□□□ 0.56
CACNA1A-227ENST00000636549 EIF3BP55884 814 aaKnown RBP18.54■□□□□ 0.56
CACNA1A-227ENST00000636549 TMC2Q8TDI7 906 aa18.54■□□□□ 0.56
CACNA1A-227ENST00000636549 GBA2Q9HCG7 927 aaPredicted RBP18.54■□□□□ 0.56
CACNA1A-227ENST00000636549 DYRK1BQ9Y463 629 aa18.54■□□□□ 0.56
CACNA1A-227ENST00000636549 PNMA6AP0CW24 399 aaPredicted RBP18.53■□□□□ 0.56
CACNA1A-227ENST00000636549 TPD52L3Q96J77 140 aa18.53■□□□□ 0.56
CACNA1A-227ENST00000636549 SAMD9Q5K651 1589 aa18.53■□□□□ 0.56
CACNA1A-227ENST00000636549 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.53■□□□□ 0.56
CACNA1A-227ENST00000636549 PER1O15534 1290 aaPredicted RBP18.53■□□□□ 0.56
CACNA1A-227ENST00000636549 LTFP02788 710 aa18.53■□□□□ 0.56
CACNA1A-227ENST00000636549 MACC1Q6ZN28 852 aa18.53■□□□□ 0.56
CACNA1A-227ENST00000636549 COL26A1Q96A83 441 aa18.53■□□□□ 0.56
CACNA1A-227ENST00000636549 TAAR1Q96RJ0 339 aa18.53■□□□□ 0.56
CACNA1A-227ENST00000636549 ACTR5Q9H9F9 607 aaPredicted RBP18.53■□□□□ 0.56
CACNA1A-227ENST00000636549 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.53■□□□□ 0.56
CACNA1A-227ENST00000636549 EPHB3P54753 998 aa18.53■□□□□ 0.56
CACNA1A-227ENST00000636549 BBS7Q8IWZ6 715 aa18.53■□□□□ 0.56
CACNA1A-227ENST00000636549 RARS2Q5T160 578 aaKnown RBP18.53■□□□□ 0.56
CACNA1A-227ENST00000636549 ANO5Q75V66 913 aa18.53■□□□□ 0.56
CACNA1A-227ENST00000636549 LRRC14BA6NHZ5 514 aa18.53■□□□□ 0.56
CACNA1A-227ENST00000636549 HLA-DQA1Q5Y7H0 255 aa18.53■□□□□ 0.56
CACNA1A-227ENST00000636549 CEP68Q76N32 757 aa18.53■□□□□ 0.56
CACNA1A-227ENST00000636549 ZSCAN18Q8TBC5 510 aaPredicted RBP18.53■□□□□ 0.56
CACNA1A-227ENST00000636549 UCMAQ8WVF2 138 aa18.53■□□□□ 0.56
CACNA1A-227ENST00000636549 C9orf72Q96LT7 481 aa18.53■□□□□ 0.56
CACNA1A-227ENST00000636549 CCT7Q99832 543 aa18.53■□□□□ 0.56
CACNA1A-227ENST00000636549 LY9Q9HBG7 655 aa18.53■□□□□ 0.56
CACNA1A-227ENST00000636549 SH3GLB2Q9NR46 395 aa18.53■□□□□ 0.56
CACNA1A-227ENST00000636549 MRPL39Q9NYK5 338 aaKnown RBP18.53■□□□□ 0.56
CACNA1A-227ENST00000636549 TEDDM1Q5T9Z0 273 aa18.52■□□□□ 0.56
CACNA1A-227ENST00000636549 NOTUMQ6P988 496 aa18.52■□□□□ 0.56
CACNA1A-227ENST00000636549 TRABDQ9H4I3 376 aa18.52■□□□□ 0.56
CACNA1A-227ENST00000636549 TFE3P19532 575 aaPredicted RBP18.52■□□□□ 0.56
CACNA1A-227ENST00000636549 CUL4AQ13619 759 aa18.52■□□□□ 0.56
CACNA1A-227ENST00000636549 DSG4Q86SJ6 1040 aa18.52■□□□□ 0.56
CACNA1A-227ENST00000636549 OR2W6PQ8NHA6 318 aa18.52■□□□□ 0.56
CACNA1A-227ENST00000636549 NT5C1AQ9BXI3 368 aa18.52■□□□□ 0.56
CACNA1A-227ENST00000636549 WNT8AQ9H1J5 351 aa18.52■□□□□ 0.56
CACNA1A-227ENST00000636549 KIF21AQ7Z4S6 1674 aa18.52■□□□□ 0.56
CACNA1A-227ENST00000636549 PDIA6Q15084 440 aa18.52■□□□□ 0.56
CACNA1A-227ENST00000636549 REEP2Q9BRK0 252 aa18.52■□□□□ 0.56
CACNA1A-227ENST00000636549 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.52■□□□□ 0.56
CACNA1A-227ENST00000636549 INTS13Q9NVM9 706 aa18.52■□□□□ 0.56
CACNA1A-227ENST00000636549 CYB561D2O14569 222 aa18.52■□□□□ 0.55
CACNA1A-227ENST00000636549 FAM107AO95990 144 aa18.52■□□□□ 0.55
CACNA1A-227ENST00000636549 CD4P01730 458 aa18.52■□□□□ 0.55
CACNA1A-227ENST00000636549 IFNAR1P17181 557 aa18.52■□□□□ 0.55
CACNA1A-227ENST00000636549 CLK1P49759 484 aaKnown RBP18.52■□□□□ 0.55
CACNA1A-227ENST00000636549 PLD1Q13393 1074 aa18.52■□□□□ 0.55
CACNA1A-227ENST00000636549 GRM4Q14833 912 aa18.52■□□□□ 0.55
CACNA1A-227ENST00000636549 ATP6V0D2Q8N8Y2 350 aa18.52■□□□□ 0.55
CACNA1A-227ENST00000636549 TLR8Q9NR97 1041 aaKnown RBP18.52■□□□□ 0.55
CACNA1A-227ENST00000636549 SNX6Q9UNH7 406 aa18.52■□□□□ 0.55
CACNA1A-227ENST00000636549 CLCN3P51790 818 aa18.52■□□□□ 0.55
CACNA1A-227ENST00000636549 SNRNP35Q16560 246 aaKnown RBP18.52■□□□□ 0.55
CACNA1A-227ENST00000636549 DEFB129Q9H1M3 183 aa18.52■□□□□ 0.55
CACNA1A-227ENST00000636549 EHD2Q9NZN4 543 aa18.52■□□□□ 0.55
CACNA1A-227ENST00000636549 STAG3L1P0CL83 205 aa18.51■□□□□ 0.55
CACNA1A-227ENST00000636549 ABCE1P61221 599 aaKnown RBP18.51■□□□□ 0.55
CACNA1A-227ENST00000636549 PTAR1Q7Z6K3 402 aaPredicted RBP18.51■□□□□ 0.55
CACNA1A-227ENST00000636549 CENPLQ8N0S6 344 aaPredicted RBP18.51■□□□□ 0.55
CACNA1A-227ENST00000636549 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.51■□□□□ 0.55
CACNA1A-227ENST00000636549 NLRP1Q9C000 1473 aa18.51■□□□□ 0.55
CACNA1A-227ENST00000636549 GRK3P35626 688 aa18.51■□□□□ 0.55
CACNA1A-227ENST00000636549 PTK7Q13308 1070 aa18.51■□□□□ 0.55
CACNA1A-227ENST00000636549 LPIN1Q14693 890 aa18.51■□□□□ 0.55
CACNA1A-227ENST00000636549 TAF5Q15542 800 aa18.51■□□□□ 0.55
CACNA1A-227ENST00000636549 KCNT1Q5JUK3 1230 aa18.51■□□□□ 0.55
CACNA1A-227ENST00000636549 PIK3R5Q8WYR1 880 aa18.51■□□□□ 0.55
CACNA1A-227ENST00000636549 ATG4CQ96DT6 458 aa18.51■□□□□ 0.55
CACNA1A-227ENST00000636549 GOLPH3Q9H4A6 298 aa18.51■□□□□ 0.55
CACNA1A-227ENST00000636549 MRPL40Q9NQ50 206 aaKnown RBP18.51■□□□□ 0.55
CACNA1A-227ENST00000636549 BARHL2Q9NY43 387 aa18.51■□□□□ 0.55
CACNA1A-227ENST00000636549 AXIN2Q9Y2T1 843 aa18.51■□□□□ 0.55
CACNA1A-227ENST00000636549 GUCY1A3Q02108 690 aa18.51■□□□□ 0.55
CACNA1A-227ENST00000636549 RESTQ13127 1097 aa18.51■□□□□ 0.55
CACNA1A-227ENST00000636549 TYW3Q6IPR3 259 aaKnown RBP18.51■□□□□ 0.55
CACNA1A-227ENST00000636549 SLC25A24Q6NUK1 477 aa18.51■□□□□ 0.55
CACNA1A-227ENST00000636549 CDC42EP5Q6NZY7 148 aa18.51■□□□□ 0.55
CACNA1A-227ENST00000636549 EDEM1Q92611 657 aa18.51■□□□□ 0.55
CACNA1A-227ENST00000636549 EME1Q96AY2 570 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms