RNA–Protein interactions for RNA: ENST00000635227.1

LINC01108-202, Transcript of long intergenic non-protein coding RNA 1108, humanhuman

TSL 3 BASIC

Gene LINC01108, Length 776 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01108-202ENST00000635227 EPHB1P54762 984 aa8.28□□□□□ -1.08
LINC01108-202ENST00000635227 TARDBPQ13148 414 aaKnown RBP eCLIP8.28□□□□□ -1.08
LINC01108-202ENST00000635227 NRN1LQ496H8 165 aa8.28□□□□□ -1.08
LINC01108-202ENST00000635227 METTL24Q5JXM2 366 aa8.28□□□□□ -1.08
LINC01108-202ENST00000635227 NAIF1Q69YI7 327 aaPredicted RBP8.28□□□□□ -1.08
LINC01108-202ENST00000635227 UBE3BQ7Z3V4 1068 aa8.28□□□□□ -1.08
LINC01108-202ENST00000635227 MYOCQ99972 504 aa8.28□□□□□ -1.08
LINC01108-202ENST00000635227 MRI1Q9BV20 369 aa8.28□□□□□ -1.08
LINC01108-202ENST00000635227 RHOBTB2Q9BYZ6 727 aa8.28□□□□□ -1.08
LINC01108-202ENST00000635227 MOCS1Q9NZB8 636 aa8.28□□□□□ -1.08
LINC01108-202ENST00000635227 SLC23A1Q9UHI7 598 aa8.28□□□□□ -1.08
LINC01108-202ENST00000635227 RUVBL1Q9Y265 456 aaKnown RBP8.28□□□□□ -1.08
LINC01108-202ENST00000635227 PCDHB1Q9Y5F3 818 aa8.28□□□□□ -1.08
LINC01108-202ENST00000635227 USP16Q9Y5T5 823 aa8.28□□□□□ -1.08
LINC01108-202ENST00000635227 BCORQ6W2J9 1755 aa8.27□□□□□ -1.08
LINC01108-202ENST00000635227 LY75O60449 1722 aa8.27□□□□□ -1.09
LINC01108-202ENST00000635227 GOLGA6L6A8MZA4 724 aa8.27□□□□□ -1.09
LINC01108-202ENST00000635227 S100BP04271 92 aaPredicted RBP8.27□□□□□ -1.09
LINC01108-202ENST00000635227 PF4V1P10720 104 aa8.27□□□□□ -1.09
LINC01108-202ENST00000635227 INSRRP14616 1297 aa8.27□□□□□ -1.09
LINC01108-202ENST00000635227 ZKSCAN1P17029 563 aaPredicted RBP8.27□□□□□ -1.09
LINC01108-202ENST00000635227 HSPA4P34932 840 aa8.27□□□□□ -1.09
LINC01108-202ENST00000635227 KCNJ4P48050 445 aa8.27□□□□□ -1.09
LINC01108-202ENST00000635227 CLRN1P58418 232 aa8.27□□□□□ -1.09
LINC01108-202ENST00000635227 MAP2K1Q02750 393 aaPredicted RBP8.27□□□□□ -1.09
LINC01108-202ENST00000635227 TSHZ3Q63HK5 1081 aa8.27□□□□□ -1.09
LINC01108-202ENST00000635227 RNF207Q6ZRF8 634 aa8.27□□□□□ -1.09
LINC01108-202ENST00000635227 TMPRSS6Q8IU80 811 aa8.27□□□□□ -1.09
LINC01108-202ENST00000635227 SYT12Q8IV01 421 aa8.27□□□□□ -1.09
LINC01108-202ENST00000635227 CASKIN2Q8WXE0 1202 aa8.27□□□□□ -1.09
LINC01108-202ENST00000635227 TFAP2CQ92754 450 aa8.27□□□□□ -1.09
LINC01108-202ENST00000635227 GPR108Q9NPR9 543 aa8.27□□□□□ -1.09
LINC01108-202ENST00000635227 TDP1Q9NUW8 608 aa8.27□□□□□ -1.09
LINC01108-202ENST00000635227 MKI67P46013 3256 aaKnown RBP8.27□□□□□ -1.09
LINC01108-202ENST00000635227 LAMA4Q16363 1823 aa8.26□□□□□ -1.09
LINC01108-202ENST00000635227 COL5A3P25940 1745 aaPredicted RBP8.26□□□□□ -1.09
LINC01108-202ENST00000635227 DDX60Q8IY21 1712 aaKnown RBP8.26□□□□□ -1.09
LINC01108-202ENST00000635227 PJA2O43164 708 aa8.26□□□□□ -1.09
LINC01108-202ENST00000635227 ZSCAN20P17040 1043 aaPredicted RBP8.26□□□□□ -1.09
LINC01108-202ENST00000635227 PSMA5P28066 241 aa8.26□□□□□ -1.09
LINC01108-202ENST00000635227 RAP2BP61225 183 aa8.26□□□□□ -1.09
LINC01108-202ENST00000635227 CDC42EP1Q00587 391 aa8.26□□□□□ -1.09
LINC01108-202ENST00000635227 PTH1RQ03431 593 aa8.26□□□□□ -1.09
LINC01108-202ENST00000635227 CLEC17AQ6ZS10 378 aa8.26□□□□□ -1.09
LINC01108-202ENST00000635227 CATIPQ7Z7H3 387 aa8.26□□□□□ -1.09
LINC01108-202ENST00000635227 TNPO1Q92973 898 aaKnown RBP8.26□□□□□ -1.09
LINC01108-202ENST00000635227 TMX3Q96JJ7 454 aa8.26□□□□□ -1.09
LINC01108-202ENST00000635227 SNX27Q96L92 541 aa8.26□□□□□ -1.09
LINC01108-202ENST00000635227 FSD1Q9BTV5 496 aa8.26□□□□□ -1.09
LINC01108-202ENST00000635227 SIL1Q9H173 461 aa8.26□□□□□ -1.09
LINC01108-202ENST00000635227 HMG20BQ9P0W2 317 aa8.26□□□□□ -1.09
LINC01108-202ENST00000635227 CEP72Q9P209 647 aa8.26□□□□□ -1.09
LINC01108-202ENST00000635227 ZNF180Q9UJW8 692 aa8.26□□□□□ -1.09
LINC01108-202ENST00000635227 PA2G4Q9UQ80 394 aaKnown RBP8.26□□□□□ -1.09
LINC01108-202ENST00000635227 ANKRD6Q9Y2G4 727 aa8.26□□□□□ -1.09
LINC01108-202ENST00000635227 ZNF609O15014 1411 aa8.26□□□□□ -1.09
LINC01108-202ENST00000635227 CCDC171Q6TFL3 1326 aa8.26□□□□□ -1.09
LINC01108-202ENST00000635227 ABCC12Q96J65 1359 aa8.25□□□□□ -1.09
LINC01108-202ENST00000635227 GRXCR1A8MXD5 290 aa8.25□□□□□ -1.09
LINC01108-202ENST00000635227 LEFTY2O00292 366 aa8.25□□□□□ -1.09
LINC01108-202ENST00000635227 CIAO1O76071 339 aa8.25□□□□□ -1.09
LINC01108-202ENST00000635227 ATP5JP18859 108 aa8.25□□□□□ -1.09
LINC01108-202ENST00000635227 PDCP20941 246 aa8.25□□□□□ -1.09
LINC01108-202ENST00000635227 IL15P40933 162 aaPredicted RBP8.25□□□□□ -1.09
LINC01108-202ENST00000635227 KRT32Q14532 448 aa8.25□□□□□ -1.09
LINC01108-202ENST00000635227 RRP12Q5JTH9 1297 aaKnown RBP8.25□□□□□ -1.09
LINC01108-202ENST00000635227 OTUD7BQ6GQQ9 843 aa8.25□□□□□ -1.09
LINC01108-202ENST00000635227 EFCAB12Q6NXP0 572 aa8.25□□□□□ -1.09
LINC01108-202ENST00000635227 DRICH1Q6PGQ1 229 aaPredicted RBP8.25□□□□□ -1.09
LINC01108-202ENST00000635227 CWC27Q6UX04 472 aaKnown RBP8.25□□□□□ -1.09
LINC01108-202ENST00000635227 OR10H5Q8NGA6 315 aa8.25□□□□□ -1.09
LINC01108-202ENST00000635227 JPH3Q8WXH2 748 aaPredicted RBP8.25□□□□□ -1.09
LINC01108-202ENST00000635227 TM6SF1Q9BZW5 370 aa8.25□□□□□ -1.09
LINC01108-202ENST00000635227 AURKAIP1Q9NWT8 199 aaPredicted RBP8.25□□□□□ -1.09
LINC01108-202ENST00000635227 ZIM2Q9NZV7 527 aa8.25□□□□□ -1.09
LINC01108-202ENST00000635227 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.25□□□□□ -1.09
LINC01108-202ENST00000635227 CLCA2Q9UQC9 943 aa8.25□□□□□ -1.09
LINC01108-202ENST00000635227 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.25□□□□□ -1.09
LINC01108-202ENST00000635227 PALLDQ8WX93 1383 aa8.24□□□□□ -1.09
LINC01108-202ENST00000635227 SBF1O95248 1867 aa8.24□□□□□ -1.09
LINC01108-202ENST00000635227 E2F8A0AVK6 867 aa8.24□□□□□ -1.09
LINC01108-202ENST00000635227 GOLGA6L3A6NEY3 463 aa8.24□□□□□ -1.09
LINC01108-202ENST00000635227 SGTAO43765 313 aa8.24□□□□□ -1.09
LINC01108-202ENST00000635227 POU2F2P09086 479 aa8.24□□□□□ -1.09
LINC01108-202ENST00000635227 C1SP09871 688 aa8.24□□□□□ -1.09
LINC01108-202ENST00000635227 DGCR2P98153 550 aa8.24□□□□□ -1.09
LINC01108-202ENST00000635227 DSC2Q02487 901 aa8.24□□□□□ -1.09
LINC01108-202ENST00000635227 TOB2Q14106 344 aaPredicted RBP8.24□□□□□ -1.09
LINC01108-202ENST00000635227 ANKRD1Q15327 319 aa8.24□□□□□ -1.09
LINC01108-202ENST00000635227 ATXN7L2Q5T6C5 722 aaPredicted RBP8.24□□□□□ -1.09
LINC01108-202ENST00000635227 RSPH3Q86UC2 560 aa8.24□□□□□ -1.09
LINC01108-202ENST00000635227 DCBLD1Q8N8Z6 715 aa8.24□□□□□ -1.09
LINC01108-202ENST00000635227 ZFP28Q8NHY6 868 aa8.24□□□□□ -1.09
LINC01108-202ENST00000635227 IFI44Q8TCB0 444 aa8.24□□□□□ -1.09
LINC01108-202ENST00000635227 JDP2Q8WYK2 163 aa8.24□□□□□ -1.09
LINC01108-202ENST00000635227 KAZALD1Q96I82 304 aa8.24□□□□□ -1.09
LINC01108-202ENST00000635227 ZSCAN31Q96LW9 406 aaPredicted RBP8.24□□□□□ -1.09
LINC01108-202ENST00000635227 DMRTA2Q96SC8 542 aa8.24□□□□□ -1.09
LINC01108-202ENST00000635227 NDC1Q9BTX1 674 aa8.24□□□□□ -1.09
LINC01108-202ENST00000635227 LSG1Q9H089 658 aaKnown RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms