RNA–Protein interactions for RNA: ENST00000635214.1

PATJ-216, Transcript of PATJ, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene PATJ, Length 4,863 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATJ-216ENST00000635214 LRRC39Q96DD0 335 aa9.12□□□□□ -0.95
PATJ-216ENST00000635214 L3MBTL3Q96JM7 780 aaPredicted RBP9.12□□□□□ -0.95
PATJ-216ENST00000635214 AGPAT5Q9NUQ2 364 aa9.12□□□□□ -0.95
PATJ-216ENST00000635214 TMEM161AQ9NX61 479 aa9.12□□□□□ -0.95
PATJ-216ENST00000635214 TAGLN3Q9UI15 199 aa9.12□□□□□ -0.95
PATJ-216ENST00000635214 CNOT7Q9UIV1 285 aaKnown RBP9.12□□□□□ -0.95
PATJ-216ENST00000635214 RAB21Q9UL25 225 aa9.12□□□□□ -0.95
PATJ-216ENST00000635214 ITGB4P16144 1822 aa9.12□□□□□ -0.95
PATJ-216ENST00000635214 SFI1A8K8P3 1242 aa9.12□□□□□ -0.95
PATJ-216ENST00000635214 MAFGO15525 162 aa9.12□□□□□ -0.95
PATJ-216ENST00000635214 UCHL3P15374 230 aa9.12□□□□□ -0.95
PATJ-216ENST00000635214 SLC16A2P36021 539 aa9.12□□□□□ -0.95
PATJ-216ENST00000635214 KCNK10P57789 538 aa9.12□□□□□ -0.95
PATJ-216ENST00000635214 C1QTNF8P60827 252 aa9.12□□□□□ -0.95
PATJ-216ENST00000635214 C16orf72Q14CZ0 275 aa9.12□□□□□ -0.95
PATJ-216ENST00000635214 EDRF1Q3B7T1 1238 aa9.12□□□□□ -0.95
PATJ-216ENST00000635214 SNX30Q5VWJ9 437 aa9.12□□□□□ -0.95
PATJ-216ENST00000635214 PID1Q7Z2X4 250 aa9.12□□□□□ -0.95
PATJ-216ENST00000635214 OXER1Q8TDS5 423 aa9.12□□□□□ -0.95
PATJ-216ENST00000635214 CASKIN2Q8WXE0 1202 aa9.12□□□□□ -0.95
PATJ-216ENST00000635214 FAR2Q96K12 515 aa9.12□□□□□ -0.95
PATJ-216ENST00000635214 ERGIC2Q96RQ1 377 aa9.12□□□□□ -0.95
PATJ-216ENST00000635214 TRIM10Q9UDY6 481 aa9.12□□□□□ -0.95
PATJ-216ENST00000635214 SFMBT1Q9UHJ3 866 aa9.12□□□□□ -0.95
PATJ-216ENST00000635214 RABGEF1Q9UJ41 708 aa9.12□□□□□ -0.95
PATJ-216ENST00000635214 MKL2Q9ULH7 1088 aa9.12□□□□□ -0.95
PATJ-216ENST00000635214 SLC8A2Q9UPR5 921 aa9.12□□□□□ -0.95
PATJ-216ENST00000635214 LAMB4A4D0S4 1761 aa9.12□□□□□ -0.95
PATJ-216ENST00000635214 CNTNAP5Q8WYK1 1306 aa9.12□□□□□ -0.95
PATJ-216ENST00000635214 SRRM3A6NNA2 597 aaPredicted RBP9.12□□□□□ -0.95
PATJ-216ENST00000635214 H2AFYO75367 372 aaKnown RBP9.12□□□□□ -0.95
PATJ-216ENST00000635214 COILP38432 576 aaPredicted RBP9.12□□□□□ -0.95
PATJ-216ENST00000635214 MAPK7Q13164 816 aa9.12□□□□□ -0.95
PATJ-216ENST00000635214 CHI3L2Q15782 390 aa9.12□□□□□ -0.95
PATJ-216ENST00000635214 RBBP7Q16576 425 aa9.12□□□□□ -0.95
PATJ-216ENST00000635214 Q4G0T1 1027 aa9.12□□□□□ -0.95
PATJ-216ENST00000635214 ZNF394Q53GI3 561 aa9.12□□□□□ -0.95
PATJ-216ENST00000635214 SPOUT1Q5T280 376 aaKnown RBP9.12□□□□□ -0.95
PATJ-216ENST00000635214 RSBN1Q5VWQ0 802 aaPredicted RBP9.12□□□□□ -0.95
PATJ-216ENST00000635214 PDXDC2PQ6P474 469 aa9.12□□□□□ -0.95
PATJ-216ENST00000635214 BNC2Q6ZN30 1099 aaPredicted RBP9.12□□□□□ -0.95
PATJ-216ENST00000635214 RINLQ6ZS11 566 aa9.12□□□□□ -0.95
PATJ-216ENST00000635214 RNF135Q8IUD6 432 aa9.12□□□□□ -0.95
PATJ-216ENST00000635214 PAIP1Q9H074 479 aaKnown RBP9.12□□□□□ -0.95
PATJ-216ENST00000635214 RIC8BQ9NVN3 520 aa9.12□□□□□ -0.95
PATJ-216ENST00000635214 APEX2Q9UBZ4 518 aa9.12□□□□□ -0.95
PATJ-216ENST00000635214 XPO7Q9UIA9 1087 aaKnown RBP9.12□□□□□ -0.95
PATJ-216ENST00000635214 GGA2Q9UJY4 613 aa9.12□□□□□ -0.95
PATJ-216ENST00000635214 F8VZ95 297 aa9.11□□□□□ -0.95
PATJ-216ENST00000635214 H0YC42 278 aa9.11□□□□□ -0.95
PATJ-216ENST00000635214 HMGB3O15347 200 aaKnown RBP9.11□□□□□ -0.95
PATJ-216ENST00000635214 CYP2D6P10635 497 aa9.11□□□□□ -0.95
PATJ-216ENST00000635214 TTKP33981 857 aa9.11□□□□□ -0.95
PATJ-216ENST00000635214 NUDT2P50583 147 aa9.11□□□□□ -0.95
PATJ-216ENST00000635214 C21orf59P57076 290 aa9.11□□□□□ -0.95
PATJ-216ENST00000635214 SZRD1Q7Z422 152 aa9.11□□□□□ -0.95
PATJ-216ENST00000635214 NSUN6Q8TEA1 469 aaKnown RBP9.11□□□□□ -0.95
PATJ-216ENST00000635214 GLMNQ92990 594 aa9.11□□□□□ -0.95
PATJ-216ENST00000635214 FAM162AQ96A26 154 aa9.11□□□□□ -0.95
PATJ-216ENST00000635214 PLEKHA8Q96JA3 519 aa9.11□□□□□ -0.95
PATJ-216ENST00000635214 PPP1R2P1Q96PQ5 205 aa9.11□□□□□ -0.95
PATJ-216ENST00000635214 SENP7Q9BQF6 1050 aa9.11□□□□□ -0.95
PATJ-216ENST00000635214 ZBED2Q9BTP6 218 aa9.11□□□□□ -0.95
PATJ-216ENST00000635214 KLHL31Q9H511 634 aa9.11□□□□□ -0.95
PATJ-216ENST00000635214 DAGLAQ9Y4D2 1042 aa9.11□□□□□ -0.95
PATJ-216ENST00000635214 EMSYQ7Z589 1322 aa9.11□□□□□ -0.95
PATJ-216ENST00000635214 PNMA8CA0A1B0GUJ8 204 aa9.11□□□□□ -0.95
PATJ-216ENST00000635214 MYO1GB0I1T2 1018 aa9.11□□□□□ -0.95
PATJ-216ENST00000635214 KIF28PB7ZC32 967 aa9.11□□□□□ -0.95
PATJ-216ENST00000635214 RGS5O15539 181 aa9.11□□□□□ -0.95
PATJ-216ENST00000635214 TCN1P20061 433 aaPredicted RBP9.11□□□□□ -0.95
PATJ-216ENST00000635214 IL12RB1P42701 662 aa9.11□□□□□ -0.95
PATJ-216ENST00000635214 PIGHQ14442 188 aaPredicted RBP9.11□□□□□ -0.95
PATJ-216ENST00000635214 CCDC81Q6ZN84 652 aa9.11□□□□□ -0.95
PATJ-216ENST00000635214 HEATR4Q86WZ0 1026 aa9.11□□□□□ -0.95
PATJ-216ENST00000635214 ADGRF4Q8IZF3 695 aa9.11□□□□□ -0.95
PATJ-216ENST00000635214 SRBD1Q8N5C6 995 aaKnown RBP9.11□□□□□ -0.95
PATJ-216ENST00000635214 TASP1Q9H6P5 420 aa9.11□□□□□ -0.95
PATJ-216ENST00000635214 RAB6BQ9NRW1 208 aa9.11□□□□□ -0.95
PATJ-216ENST00000635214 TUBGCP4Q9UGJ1 667 aa9.11□□□□□ -0.95
PATJ-216ENST00000635214 DDX20Q9UHI6 824 aaKnown RBP9.11□□□□□ -0.95
PATJ-216ENST00000635214 RGPD2P0DJD1 1756 aa9.11□□□□□ -0.95
PATJ-216ENST00000635214 C19orf81C9J6K1 198 aa9.11□□□□□ -0.95
PATJ-216ENST00000635214 SKAP2O75563 359 aaPredicted RBP9.11□□□□□ -0.95
PATJ-216ENST00000635214 FKBP9O95302 570 aa9.11□□□□□ -0.95
PATJ-216ENST00000635214 GH2P01242 217 aa9.11□□□□□ -0.95
PATJ-216ENST00000635214 CAPN1P07384 714 aa9.11□□□□□ -0.95
PATJ-216ENST00000635214 APRTP07741 180 aa9.11□□□□□ -0.95
PATJ-216ENST00000635214 TSPY1Q01534 308 aa9.11□□□□□ -0.95
PATJ-216ENST00000635214 CCDC149Q6ZUS6 474 aa9.11□□□□□ -0.95
PATJ-216ENST00000635214 FKBP9P1Q75LS8 142 aa9.11□□□□□ -0.95
PATJ-216ENST00000635214 TMPRSS6Q8IU80 811 aa9.11□□□□□ -0.95
PATJ-216ENST00000635214 ZNF784Q8NCA9 323 aaPredicted RBP9.11□□□□□ -0.95
PATJ-216ENST00000635214 PPHLN1Q8NEY8 458 aaKnown RBP9.11□□□□□ -0.95
PATJ-216ENST00000635214 ENGASEQ8NFI3 743 aa9.11□□□□□ -0.95
PATJ-216ENST00000635214 ASAP3Q8TDY4 903 aa9.11□□□□□ -0.95
PATJ-216ENST00000635214 ATXN2LQ8WWM7 1075 aaKnown RBP9.11□□□□□ -0.95
PATJ-216ENST00000635214 MCRS1Q96EZ8 462 aa9.11□□□□□ -0.95
PATJ-216ENST00000635214 ILKAPQ9H0C8 392 aaPredicted RBP9.11□□□□□ -0.95
PATJ-216ENST00000635214 MMADHCQ9H3L0 296 aaPredicted RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms