RNA–Protein interactions for RNA: ENST00000635193.1

COL11A1-211, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL11A1, Length 5,289 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-211ENST00000635193 ST13P50502 369 aaKnown RBP12.14□□□□□ -0.47
COL11A1-211ENST00000635193 KYAT1Q16773 422 aa12.14□□□□□ -0.47
COL11A1-211ENST00000635193 TMEM143Q96AN5 459 aa12.14□□□□□ -0.47
COL11A1-211ENST00000635193 OSGEPQ9NPF4 335 aa12.14□□□□□ -0.47
COL11A1-211ENST00000635193 APPL1Q9UKG1 709 aa12.14□□□□□ -0.47
COL11A1-211ENST00000635193 ZBTB39O15060 712 aa12.13□□□□□ -0.47
COL11A1-211ENST00000635193 FAM153BP0C7A2 387 aa12.13□□□□□ -0.47
COL11A1-211ENST00000635193 THRAP10827 490 aa12.13□□□□□ -0.47
COL11A1-211ENST00000635193 GTF2H1P32780 548 aa12.13□□□□□ -0.47
COL11A1-211ENST00000635193 C21orf59P57076 290 aa12.13□□□□□ -0.47
COL11A1-211ENST00000635193 ST3GAL1Q11201 340 aa12.13□□□□□ -0.47
COL11A1-211ENST00000635193 RASA2Q15283 850 aa12.13□□□□□ -0.47
COL11A1-211ENST00000635193 FAM153CQ494X1 144 aa12.13□□□□□ -0.47
COL11A1-211ENST00000635193 RSBN1Q5VWQ0 802 aaPredicted RBP12.13□□□□□ -0.47
COL11A1-211ENST00000635193 CENPPQ6IPU0 288 aa12.13□□□□□ -0.47
COL11A1-211ENST00000635193 BNC2Q6ZN30 1099 aaPredicted RBP12.13□□□□□ -0.47
COL11A1-211ENST00000635193 TAS2R42Q7RTR8 314 aa12.13□□□□□ -0.47
COL11A1-211ENST00000635193 LRRC6Q86X45 466 aa12.13□□□□□ -0.47
COL11A1-211ENST00000635193 FBXO36Q8NEA4 188 aa12.13□□□□□ -0.47
COL11A1-211ENST00000635193 ASAP3Q8TDY4 903 aa12.13□□□□□ -0.47
COL11A1-211ENST00000635193 ACAD9Q9H845 621 aa12.13□□□□□ -0.47
COL11A1-211ENST00000635193 CNOT7Q9UIV1 285 aaKnown RBP12.13□□□□□ -0.47
COL11A1-211ENST00000635193 AGAP1Q9UPQ3 857 aa12.13□□□□□ -0.47
COL11A1-211ENST00000635193 DAGLAQ9Y4D2 1042 aa12.13□□□□□ -0.47
COL11A1-211ENST00000635193 AK9Q5TCS8 1911 aa12.13□□□□□ -0.47
COL11A1-211ENST00000635193 ZNF844Q08AG5 666 aa12.13□□□□□ -0.47
COL11A1-211ENST00000635193 STX5Q13190 355 aa12.13□□□□□ -0.47
COL11A1-211ENST00000635193 XKR3Q5GH77 459 aa12.13□□□□□ -0.47
COL11A1-211ENST00000635193 C4orf22Q6V702 233 aa12.13□□□□□ -0.47
COL11A1-211ENST00000635193 AGBL1Q96MI9 1066 aa12.13□□□□□ -0.47
COL11A1-211ENST00000635193 TMEM120AQ9BXJ8 343 aa12.13□□□□□ -0.47
COL11A1-211ENST00000635193 ZNF212Q9UDV6 495 aa12.13□□□□□ -0.47
COL11A1-211ENST00000635193 DNALI1O14645 258 aaPredicted RBP12.13□□□□□ -0.47
COL11A1-211ENST00000635193 GRAP2O75791 330 aa12.13□□□□□ -0.47
COL11A1-211ENST00000635193 MYO1DO94832 1006 aa12.13□□□□□ -0.47
COL11A1-211ENST00000635193 TNFAIP8O95379 198 aa12.13□□□□□ -0.47
COL11A1-211ENST00000635193 BCL10O95999 233 aa12.13□□□□□ -0.47
COL11A1-211ENST00000635193 NDUFB10O96000 172 aa12.13□□□□□ -0.47
COL11A1-211ENST00000635193 SCFD1Q8WVM8 642 aa12.13□□□□□ -0.47
COL11A1-211ENST00000635193 ACSF2Q96CM8 615 aaPredicted RBP12.13□□□□□ -0.47
COL11A1-211ENST00000635193 MTERF3Q96E29 417 aa12.13□□□□□ -0.47
COL11A1-211ENST00000635193 TNIP3Q96KP6 325 aa12.13□□□□□ -0.47
COL11A1-211ENST00000635193 ZNF560Q96MR9 790 aa12.13□□□□□ -0.47
COL11A1-211ENST00000635193 SEMA4AQ9H3S1 761 aa12.13□□□□□ -0.47
COL11A1-211ENST00000635193 IL1RL2Q9HB29 575 aa12.13□□□□□ -0.47
COL11A1-211ENST00000635193 NDFIP2Q9NV92 336 aa12.13□□□□□ -0.47
COL11A1-211ENST00000635193 E9PCH4 1651 aa12.13□□□□□ -0.47
COL11A1-211ENST00000635193 RIMBP3CA6NJZ7 1639 aa12.13□□□□□ -0.47
COL11A1-211ENST00000635193 RIMBP3BA6NNM3 1639 aa12.13□□□□□ -0.47
COL11A1-211ENST00000635193 RIMBP3Q9UFD9 1639 aa12.13□□□□□ -0.47
COL11A1-211ENST00000635193 RGS5O15539 181 aa12.13□□□□□ -0.47
COL11A1-211ENST00000635193 TLR2O60603 784 aa12.13□□□□□ -0.47
COL11A1-211ENST00000635193 SARSP49591 514 aaKnown RBP12.13□□□□□ -0.47
COL11A1-211ENST00000635193 PTENP60484 403 aa12.13□□□□□ -0.47
COL11A1-211ENST00000635193 NT5DC1Q5TFE4 455 aa12.13□□□□□ -0.47
COL11A1-211ENST00000635193 RTKN2Q8IZC4 609 aa12.13□□□□□ -0.47
COL11A1-211ENST00000635193 FAM162AQ96A26 154 aa12.13□□□□□ -0.47
COL11A1-211ENST00000635193 SUGT1Q9Y2Z0 365 aa12.13□□□□□ -0.47
COL11A1-211ENST00000635193 V9GYQ6 96 aa12.13□□□□□ -0.47
COL11A1-211ENST00000635193 C1orf232A0A0U1RR37 186 aa12.12□□□□□ -0.47
COL11A1-211ENST00000635193 SAC3D1A6NKF1 404 aa12.12□□□□□ -0.47
COL11A1-211ENST00000635193 GPD1P21695 349 aa12.12□□□□□ -0.47
COL11A1-211ENST00000635193 CRELD2Q6UXH1 353 aaPredicted RBP12.12□□□□□ -0.47
COL11A1-211ENST00000635193 TMC3Q7Z5M5 1100 aa12.12□□□□□ -0.47
COL11A1-211ENST00000635193 CROCCP3Q8IVE0 287 aa12.12□□□□□ -0.47
COL11A1-211ENST00000635193 ATXN2LQ8WWM7 1075 aaKnown RBP12.12□□□□□ -0.47
COL11A1-211ENST00000635193 DCUN1D5Q9BTE7 237 aa12.12□□□□□ -0.47
COL11A1-211ENST00000635193 ZNF556Q9HAH1 456 aa12.12□□□□□ -0.47
COL11A1-211ENST00000635193 NYAP2Q9P242 653 aa12.12□□□□□ -0.47
COL11A1-211ENST00000635193 DLC1Q96QB1 1528 aa12.12□□□□□ -0.47
COL11A1-211ENST00000635193 POLRMTO00411 1230 aaKnown RBP12.12□□□□□ -0.47
COL11A1-211ENST00000635193 RPS6KA5O75582 802 aa12.12□□□□□ -0.47
COL11A1-211ENST00000635193 CAPN1P07384 714 aa12.12□□□□□ -0.47
COL11A1-211ENST00000635193 FDX1P10109 184 aa12.12□□□□□ -0.47
COL11A1-211ENST00000635193 NFKBIAP25963 317 aa12.12□□□□□ -0.47
COL11A1-211ENST00000635193 RGS2P41220 211 aa12.12□□□□□ -0.47
COL11A1-211ENST00000635193 PLA2G4FQ68DD2 849 aa12.12□□□□□ -0.47
COL11A1-211ENST00000635193 C1orf131Q8NDD1 294 aaKnown RBP12.12□□□□□ -0.47
COL11A1-211ENST00000635193 GDF3Q9NR23 364 aa12.12□□□□□ -0.47
COL11A1-211ENST00000635193 MPP6Q9NZW5 540 aa12.12□□□□□ -0.47
COL11A1-211ENST00000635193 SFMBT1Q9UHJ3 866 aa12.12□□□□□ -0.47
COL11A1-211ENST00000635193 RIPK2O43353 540 aa12.12□□□□□ -0.47
COL11A1-211ENST00000635193 TFRCP02786 760 aaKnown RBP12.12□□□□□ -0.47
COL11A1-211ENST00000635193 STIP1P31948 543 aaKnown RBP12.12□□□□□ -0.47
COL11A1-211ENST00000635193 PDIA6Q15084 440 aa12.12□□□□□ -0.47
COL11A1-211ENST00000635193 ARMCX4Q5H9R4 360 aa12.12□□□□□ -0.47
COL11A1-211ENST00000635193 RRM2BQ7LG56 351 aa12.12□□□□□ -0.47
COL11A1-211ENST00000635193 SPATA33Q96N06 139 aa12.12□□□□□ -0.47
COL11A1-211ENST00000635193 ZNF184Q99676 751 aaPredicted RBP12.12□□□□□ -0.47
COL11A1-211ENST00000635193 BTBD10Q9BSF8 475 aa12.12□□□□□ -0.47
COL11A1-211ENST00000635193 RUSC1Q9BVN2 902 aa12.12□□□□□ -0.47
COL11A1-211ENST00000635193 RAD21L1Q9H4I0 556 aa12.12□□□□□ -0.47
COL11A1-211ENST00000635193 CYLDQ9NQC7 956 aa12.12□□□□□ -0.47
COL11A1-211ENST00000635193 EXTL3O43909 919 aa12.12□□□□□ -0.47
COL11A1-211ENST00000635193 EFCAB14O75071 495 aa12.12□□□□□ -0.47
COL11A1-211ENST00000635193 TSC22D2O75157 780 aa12.12□□□□□ -0.47
COL11A1-211ENST00000635193 GLRA3O75311 464 aa12.12□□□□□ -0.47
COL11A1-211ENST00000635193 GRK2P25098 689 aa12.12□□□□□ -0.47
COL11A1-211ENST00000635193 SOX6P35712 828 aa12.12□□□□□ -0.47
COL11A1-211ENST00000635193 IREB2P48200 963 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms