RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 PDPRQ8NCN5 879 aa3.1□□□□□ -1.91
SMARCB1-208ENST00000634926 PJA1Q8NG27 643 aa3.1□□□□□ -1.91
SMARCB1-208ENST00000634926 OR10H5Q8NGA6 315 aa3.1□□□□□ -1.91
SMARCB1-208ENST00000634926 PPP1R14CQ8TAE6 165 aa3.1□□□□□ -1.91
SMARCB1-208ENST00000634926 AUTS2Q8WXX7 1259 aa3.1□□□□□ -1.91
SMARCB1-208ENST00000634926 TTC17Q96AE7 1141 aa3.1□□□□□ -1.91
SMARCB1-208ENST00000634926 TIFAQ96CG3 184 aa3.1□□□□□ -1.91
SMARCB1-208ENST00000634926 IL17RAQ96F46 866 aa3.1□□□□□ -1.91
SMARCB1-208ENST00000634926 LRGUKQ96M69 825 aa3.1□□□□□ -1.91
SMARCB1-208ENST00000634926 TAAR9Q96RI9 348 aa3.1□□□□□ -1.91
SMARCB1-208ENST00000634926 UIMC1Q96RL1 719 aa3.1□□□□□ -1.91
SMARCB1-208ENST00000634926 TUBGCP5Q96RT8 1024 aa3.1□□□□□ -1.91
SMARCB1-208ENST00000634926 ANO3Q9BYT9 981 aa3.1□□□□□ -1.91
SMARCB1-208ENST00000634926 POFUT1Q9H488 388 aa3.1□□□□□ -1.91
SMARCB1-208ENST00000634926 MTG2Q9H4K7 406 aa3.1□□□□□ -1.91
SMARCB1-208ENST00000634926 SPON1Q9HCB6 807 aa3.1□□□□□ -1.91
SMARCB1-208ENST00000634926 MAN1C1Q9NR34 630 aa3.1□□□□□ -1.91
SMARCB1-208ENST00000634926 C1orf112Q9NSG2 853 aa3.1□□□□□ -1.91
SMARCB1-208ENST00000634926 ARPP21Q9UBL0 812 aaPredicted RBP3.1□□□□□ -1.91
SMARCB1-208ENST00000634926 TMPRSS11EQ9UL52 423 aa3.1□□□□□ -1.91
SMARCB1-208ENST00000634926 PPP2R3BQ9Y5P8 575 aa3.1□□□□□ -1.91
SMARCB1-208ENST00000634926 NUMBLQ9Y6R0 609 aa3.1□□□□□ -1.91
SMARCB1-208ENST00000634926 ANO9A1A5B4 782 aa3.09□□□□□ -1.91
SMARCB1-208ENST00000634926 CCDC78A2IDD5 438 aa3.09□□□□□ -1.91
SMARCB1-208ENST00000634926 AP1G1O43747 822 aa3.09□□□□□ -1.91
SMARCB1-208ENST00000634926 CTNND1O60716 968 aaKnown RBP3.09□□□□□ -1.91
SMARCB1-208ENST00000634926 NDUFS2O75306 463 aa3.09□□□□□ -1.91
SMARCB1-208ENST00000634926 OFD1O75665 1012 aa3.09□□□□□ -1.91
SMARCB1-208ENST00000634926 PRPF6O94906 941 aaKnown RBP3.09□□□□□ -1.91
SMARCB1-208ENST00000634926 CLEC2LP0C7M8 214 aa3.09□□□□□ -1.91
SMARCB1-208ENST00000634926 C5AR1P21730 350 aa3.09□□□□□ -1.91
SMARCB1-208ENST00000634926 YY1P25490 414 aa3.09□□□□□ -1.91
SMARCB1-208ENST00000634926 BRD3Q15059 726 aa3.09□□□□□ -1.91
SMARCB1-208ENST00000634926 SLC15A2Q16348 729 aa3.09□□□□□ -1.91
SMARCB1-208ENST00000634926 TXNRD1Q16881 649 aa3.09□□□□□ -1.91
SMARCB1-208ENST00000634926 MUM1Q2TAK8 710 aa3.09□□□□□ -1.91
SMARCB1-208ENST00000634926 ANO4Q32M45 955 aa3.09□□□□□ -1.91
SMARCB1-208ENST00000634926 LONRF3Q496Y0 759 aa3.09□□□□□ -1.91
SMARCB1-208ENST00000634926 IFIT1BQ5T764 474 aaKnown RBP3.09□□□□□ -1.91
SMARCB1-208ENST00000634926 KIAA1841Q6NSI8 718 aa3.09□□□□□ -1.91
SMARCB1-208ENST00000634926 Q6ZNX1 250 aa3.09□□□□□ -1.91
SMARCB1-208ENST00000634926 LYSMD2Q8IV50 215 aa3.09□□□□□ -1.91
SMARCB1-208ENST00000634926 SLC41A1Q8IVJ1 513 aa3.09□□□□□ -1.91
SMARCB1-208ENST00000634926 FAM43AQ8N2R8 423 aa3.09□□□□□ -1.91
SMARCB1-208ENST00000634926 RSAD2Q8WXG1 361 aa3.09□□□□□ -1.91
SMARCB1-208ENST00000634926 HPS3Q969F9 1004 aa3.09□□□□□ -1.91
SMARCB1-208ENST00000634926 FERMT2Q96AC1 680 aa3.09□□□□□ -1.91
SMARCB1-208ENST00000634926 TESK2Q96S53 571 aa3.09□□□□□ -1.91
SMARCB1-208ENST00000634926 MYL10Q9BUA6 226 aa3.09□□□□□ -1.91
SMARCB1-208ENST00000634926 OSBPL6Q9BZF3 934 aa3.09□□□□□ -1.91
SMARCB1-208ENST00000634926 QRSL1Q9H0R6 528 aaKnown RBP3.09□□□□□ -1.91
SMARCB1-208ENST00000634926 KMT5AQ9NQR1 393 aa3.09□□□□□ -1.91
SMARCB1-208ENST00000634926 DDX21Q9NR30 783 aaKnown RBP eCLIP3.09□□□□□ -1.91
SMARCB1-208ENST00000634926 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.09□□□□□ -1.91
SMARCB1-208ENST00000634926 USP25Q9UHP3 1055 aa3.09□□□□□ -1.91
SMARCB1-208ENST00000634926 SAP30BPQ9UHR5 308 aaKnown RBP3.09□□□□□ -1.91
SMARCB1-208ENST00000634926 TUBD1Q9UJT1 453 aa3.09□□□□□ -1.91
SMARCB1-208ENST00000634926 EDARQ9UNE0 448 aa3.09□□□□□ -1.91
SMARCB1-208ENST00000634926 USP15Q9Y4E8 981 aaPredicted RBP3.09□□□□□ -1.91
SMARCB1-208ENST00000634926 FRMPD2Q68DX3 1309 aaPredicted RBP3.09□□□□□ -1.91
SMARCB1-208ENST00000634926 PNPLA7Q6ZV29 1317 aa3.09□□□□□ -1.91
SMARCB1-208ENST00000634926 EVC2Q86UK5 1308 aa3.09□□□□□ -1.91
SMARCB1-208ENST00000634926 ROCK2O75116 1388 aaKnown RBP3.09□□□□□ -1.92
SMARCB1-208ENST00000634926 KTN1Q86UP2 1357 aaKnown RBP3.09□□□□□ -1.92
SMARCB1-208ENST00000634926 ANKRD36BQ8N2N9 1353 aa3.09□□□□□ -1.92
SMARCB1-208ENST00000634926 PLEKHG2Q9H7P9 1386 aa3.09□□□□□ -1.92
SMARCB1-208ENST00000634926 SMG6Q86US8 1419 aaKnown RBP3.09□□□□□ -1.92
SMARCB1-208ENST00000634926 TNRC18O15417 2968 aaPredicted RBP3.09□□□□□ -1.92
SMARCB1-208ENST00000634926 TJP1Q07157 1748 aa3.08□□□□□ -1.92
SMARCB1-208ENST00000634926 DLEC1Q9Y238 1755 aa3.08□□□□□ -1.92
SMARCB1-208ENST00000634926 ARFGEF1Q9Y6D6 1849 aa3.08□□□□□ -1.92
SMARCB1-208ENST00000634926 HTTP42858 3142 aa3.08□□□□□ -1.92
SMARCB1-208ENST00000634926 ST20-MTHFSA0A0A6YYL1 179 aa3.08□□□□□ -1.92
SMARCB1-208ENST00000634926 MAFGO15525 162 aa3.08□□□□□ -1.92
SMARCB1-208ENST00000634926 OPHN1O60890 802 aa3.08□□□□□ -1.92
SMARCB1-208ENST00000634926 PROP1O75360 226 aa3.08□□□□□ -1.92
SMARCB1-208ENST00000634926 HRGP04196 525 aa3.08□□□□□ -1.92
SMARCB1-208ENST00000634926 LPLP06858 475 aa3.08□□□□□ -1.92
SMARCB1-208ENST00000634926 PFKMP08237 780 aa3.08□□□□□ -1.92
SMARCB1-208ENST00000634926 NBPF7P0C2Y1 421 aaPredicted RBP3.08□□□□□ -1.92
SMARCB1-208ENST00000634926 OSMP13725 252 aa3.08□□□□□ -1.92
SMARCB1-208ENST00000634926 GZMKP49863 264 aa3.08□□□□□ -1.92
SMARCB1-208ENST00000634926 BLOC1S1P78537 153 aa3.08□□□□□ -1.92
SMARCB1-208ENST00000634926 ADCY2Q08462 1091 aa3.08□□□□□ -1.92
SMARCB1-208ENST00000634926 PICALMQ13492 652 aa3.08□□□□□ -1.92
SMARCB1-208ENST00000634926 TRIM25Q14258 630 aaKnown RBP3.08□□□□□ -1.92
SMARCB1-208ENST00000634926 GALEQ14376 348 aa3.08□□□□□ -1.92
SMARCB1-208ENST00000634926 ZNF267Q14586 743 aaPredicted RBP3.08□□□□□ -1.92
SMARCB1-208ENST00000634926 SAFBQ15424 915 aaKnown RBP eCLIP3.08□□□□□ -1.92
SMARCB1-208ENST00000634926 B3GNTL1Q67FW5 361 aaPredicted RBP3.08□□□□□ -1.92
SMARCB1-208ENST00000634926 C11orf87Q6NUJ2 197 aa3.08□□□□□ -1.92
SMARCB1-208ENST00000634926 USP45Q70EL2 814 aa3.08□□□□□ -1.92
SMARCB1-208ENST00000634926 SRGAP1Q7Z6B7 1085 aa3.08□□□□□ -1.92
SMARCB1-208ENST00000634926 C11orf96Q7Z7L8 435 aa3.08□□□□□ -1.92
SMARCB1-208ENST00000634926 PRR18Q8N4B5 295 aa3.08□□□□□ -1.92
SMARCB1-208ENST00000634926 KCNH5Q8NCM2 988 aa3.08□□□□□ -1.92
SMARCB1-208ENST00000634926 SPATA3Q8NHX4 192 aa3.08□□□□□ -1.92
SMARCB1-208ENST00000634926 DIS3LQ8TF46 1054 aaKnown RBP3.08□□□□□ -1.92
SMARCB1-208ENST00000634926 SLC9A6Q92581 669 aa3.08□□□□□ -1.92
SMARCB1-208ENST00000634926 COA7Q96BR5 231 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms