RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 GPR158Q5T848 1215 aa16.75■□□□□ 0.27
LINC00339-207ENST00000634712 SDHAF4Q5VUM1 108 aa16.75■□□□□ 0.27
LINC00339-207ENST00000634712 KRT39Q6A163 491 aa16.75■□□□□ 0.27
LINC00339-207ENST00000634712 TANGO2Q6ICL3 276 aa16.75■□□□□ 0.27
LINC00339-207ENST00000634712 SIX5Q8N196 739 aa16.75■□□□□ 0.27
LINC00339-207ENST00000634712 FLCNQ8NFG4 579 aa16.75■□□□□ 0.27
LINC00339-207ENST00000634712 ZSCAN18Q8TBC5 510 aaPredicted RBP16.75■□□□□ 0.27
LINC00339-207ENST00000634712 ELMO3Q96BJ8 720 aa16.75■□□□□ 0.27
LINC00339-207ENST00000634712 ZSWIM3Q96MP5 696 aa16.75■□□□□ 0.27
LINC00339-207ENST00000634712 ASB16Q96NS5 453 aa16.75■□□□□ 0.27
LINC00339-207ENST00000634712 CRTAC1Q9NQ79 661 aa16.75■□□□□ 0.27
LINC00339-207ENST00000634712 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.75■□□□□ 0.27
LINC00339-207ENST00000634712 UXTQ9UBK9 157 aaPredicted RBP16.75■□□□□ 0.27
LINC00339-207ENST00000634712 CA14Q9ULX7 337 aa16.75■□□□□ 0.27
LINC00339-207ENST00000634712 BICDL2A1A5D9 508 aa16.74■□□□□ 0.27
LINC00339-207ENST00000634712 ASS1P00966 412 aaKnown RBP16.74■□□□□ 0.27
LINC00339-207ENST00000634712 PDGFBP01127 241 aaPredicted RBP16.74■□□□□ 0.27
LINC00339-207ENST00000634712 BDNFP23560 247 aa16.74■□□□□ 0.27
LINC00339-207ENST00000634712 RAP1GAPP47736 663 aa16.74■□□□□ 0.27
LINC00339-207ENST00000634712 PMS1P54277 932 aaKnown RBP16.74■□□□□ 0.27
LINC00339-207ENST00000634712 PFKPQ01813 784 aa16.74■□□□□ 0.27
LINC00339-207ENST00000634712 MORC3Q14149 939 aa16.74■□□□□ 0.27
LINC00339-207ENST00000634712 CCDC142Q17RM4 750 aa16.74■□□□□ 0.27
LINC00339-207ENST00000634712 DCAF17Q5H9S7 520 aaPredicted RBP16.74■□□□□ 0.27
LINC00339-207ENST00000634712 VSTM1Q6UX27 236 aa16.74■□□□□ 0.27
LINC00339-207ENST00000634712 GAREM2Q75VX8 874 aa16.74■□□□□ 0.27
LINC00339-207ENST00000634712 NELFBQ8WX92 580 aa16.74■□□□□ 0.27
LINC00339-207ENST00000634712 E2F7Q96AV8 911 aa16.74■□□□□ 0.27
LINC00339-207ENST00000634712 PCED1BQ96HM7 432 aa16.74■□□□□ 0.27
LINC00339-207ENST00000634712 TNIP3Q96KP6 325 aa16.74■□□□□ 0.27
LINC00339-207ENST00000634712 DNAI2Q9GZS0 605 aa16.74■□□□□ 0.27
LINC00339-207ENST00000634712 SLC2A4RGQ9NR83 387 aa16.74■□□□□ 0.27
LINC00339-207ENST00000634712 ARMCX3Q9UH62 379 aaPredicted RBP16.74■□□□□ 0.27
LINC00339-207ENST00000634712 RAPGEFL1Q9UHV5 662 aa16.74■□□□□ 0.27
LINC00339-207ENST00000634712 SLC38A8A6NNN8 435 aa16.73■□□□□ 0.27
LINC00339-207ENST00000634712 DPYSL4O14531 572 aa16.73■□□□□ 0.27
LINC00339-207ENST00000634712 CD44P16070 742 aaKnown RBP16.73■□□□□ 0.27
LINC00339-207ENST00000634712 MXI1P50539 228 aa16.73■□□□□ 0.27
LINC00339-207ENST00000634712 SPOPLQ6IQ16 392 aa16.73■□□□□ 0.27
LINC00339-207ENST00000634712 POTEHQ6S545 545 aa16.73■□□□□ 0.27
LINC00339-207ENST00000634712 TRIML1Q8N9V2 468 aa16.73■□□□□ 0.27
LINC00339-207ENST00000634712 B3GALNT2Q8NCR0 500 aa16.73■□□□□ 0.27
LINC00339-207ENST00000634712 TAS1R2Q8TE23 839 aa16.73■□□□□ 0.27
LINC00339-207ENST00000634712 MED10Q9BTT4 135 aa16.73■□□□□ 0.27
LINC00339-207ENST00000634712 PLA2G2FQ9BZM2 168 aa16.73■□□□□ 0.27
LINC00339-207ENST00000634712 DPEP3Q9H4B8 488 aa16.73■□□□□ 0.27
LINC00339-207ENST00000634712 TASP1Q9H6P5 420 aa16.73■□□□□ 0.27
LINC00339-207ENST00000634712 METTL14Q9HCE5 456 aaKnown RBP16.73■□□□□ 0.27
LINC00339-207ENST00000634712 KIAA1468Q9P260 1216 aa16.73■□□□□ 0.27
LINC00339-207ENST00000634712 ZMYM5Q9UJ78 669 aa16.73■□□□□ 0.27
LINC00339-207ENST00000634712 ATP8B3O60423 1300 aa16.72■□□□□ 0.27
LINC00339-207ENST00000634712 PPP1R3GB7ZBB8 358 aa16.72■□□□□ 0.27
LINC00339-207ENST00000634712 NRG2O14511 850 aaPredicted RBP16.72■□□□□ 0.27
LINC00339-207ENST00000634712 TRIM66O15016 1216 aa16.72■□□□□ 0.27
LINC00339-207ENST00000634712 AVPR2P30518 371 aa16.72■□□□□ 0.27
LINC00339-207ENST00000634712 VIPR2P41587 438 aa16.72■□□□□ 0.27
LINC00339-207ENST00000634712 NOP14P78316 857 aaKnown RBP16.72■□□□□ 0.27
LINC00339-207ENST00000634712 CYP4F8P98187 520 aa16.72■□□□□ 0.27
LINC00339-207ENST00000634712 CCDC40Q4G0X9 1142 aa16.72■□□□□ 0.27
LINC00339-207ENST00000634712 WDR44Q5JSH3 913 aa16.72■□□□□ 0.27
LINC00339-207ENST00000634712 FILIP1Q7Z7B0 1213 aa16.72■□□□□ 0.27
LINC00339-207ENST00000634712 ZC3H3Q8IXZ2 948 aaKnown RBP16.72■□□□□ 0.27
LINC00339-207ENST00000634712 YAF2Q8IY57 180 aa16.72■□□□□ 0.27
LINC00339-207ENST00000634712 FBXL13Q8NEE6 735 aa16.72■□□□□ 0.27
LINC00339-207ENST00000634712 MRPS31Q92665 395 aaKnown RBP16.72■□□□□ 0.27
LINC00339-207ENST00000634712 SHDQ96IW2 340 aa16.72■□□□□ 0.27
LINC00339-207ENST00000634712 CEP63Q96MT8 703 aa16.72■□□□□ 0.27
LINC00339-207ENST00000634712 GBP4Q96PP9 640 aa16.72■□□□□ 0.27
LINC00339-207ENST00000634712 TRMT61BQ9BVS5 477 aaKnown RBP16.72■□□□□ 0.27
LINC00339-207ENST00000634712 ELOVL4Q9GZR5 314 aa16.72■□□□□ 0.27
LINC00339-207ENST00000634712 BRD9Q9H8M2 597 aa16.72■□□□□ 0.27
LINC00339-207ENST00000634712 EHD2Q9NZN4 543 aa16.72■□□□□ 0.27
LINC00339-207ENST00000634712 CTNND2Q9UQB3 1225 aa16.72■□□□□ 0.27
LINC00339-207ENST00000634712 HMGA1P17096 107 aaKnown RBP16.71■□□□□ 0.27
LINC00339-207ENST00000634712 PSMC3P17980 439 aa16.71■□□□□ 0.27
LINC00339-207ENST00000634712 BMP6P22004 513 aa16.71■□□□□ 0.27
LINC00339-207ENST00000634712 FCARP24071 287 aa16.71■□□□□ 0.27
LINC00339-207ENST00000634712 CLCN5P51795 746 aa16.71■□□□□ 0.27
LINC00339-207ENST00000634712 NLRP12P59046 1061 aa16.71■□□□□ 0.27
LINC00339-207ENST00000634712 PAK1Q13153 545 aa16.71■□□□□ 0.27
LINC00339-207ENST00000634712 GRM2Q14416 872 aa16.71■□□□□ 0.27
LINC00339-207ENST00000634712 STXBP5Q5T5C0 1151 aa16.71■□□□□ 0.27
LINC00339-207ENST00000634712 ASTLQ6HA08 431 aaPredicted RBP16.71■□□□□ 0.27
LINC00339-207ENST00000634712 UNC93AQ86WB7 457 aa16.71■□□□□ 0.27
LINC00339-207ENST00000634712 ARID3BQ8IVW6 561 aaPredicted RBP16.71■□□□□ 0.27
LINC00339-207ENST00000634712 STKLD1Q8NE28 680 aa16.71■□□□□ 0.27
LINC00339-207ENST00000634712 DEPDC1BQ8WUY9 529 aa16.71■□□□□ 0.27
LINC00339-207ENST00000634712 SPATA17Q96L03 361 aa16.71■□□□□ 0.27
LINC00339-207ENST00000634712 CEP295NLQ96MC4 621 aa16.71■□□□□ 0.27
LINC00339-207ENST00000634712 IPO9Q96P70 1041 aaKnown RBP16.71■□□□□ 0.27
LINC00339-207ENST00000634712 SDCBP2Q9H190 292 aa16.71■□□□□ 0.27
LINC00339-207ENST00000634712 CYP3A43Q9HB55 503 aa16.71■□□□□ 0.27
LINC00339-207ENST00000634712 TRPV4Q9HBA0 871 aa16.71■□□□□ 0.27
LINC00339-207ENST00000634712 IL21Q9HBE4 155 aa16.71■□□□□ 0.27
LINC00339-207ENST00000634712 ARHGEF3Q9NR81 526 aa16.71■□□□□ 0.27
LINC00339-207ENST00000634712 RAB20Q9NX57 234 aa16.71■□□□□ 0.27
LINC00339-207ENST00000634712 NME7Q9Y5B8 376 aa16.71■□□□□ 0.27
LINC00339-207ENST00000634712 KRBA1A5PL33 1030 aa16.7■□□□□ 0.26
LINC00339-207ENST00000634712 HEPACAM2A8MVW5 462 aa16.7■□□□□ 0.26
LINC00339-207ENST00000634712 NOL4O94818 638 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms