RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 ARAP2Q8WZ64 1704 aa7.89□□□□□ -1.15
PKP4-217ENST00000628904 TCP11X1B4DZS4 312 aa7.89□□□□□ -1.15
PKP4-217ENST00000628904 KIAA0391O15091 583 aaKnown RBP7.89□□□□□ -1.15
PKP4-217ENST00000628904 MED7O43513 233 aa7.89□□□□□ -1.15
PKP4-217ENST00000628904 USP12O75317 370 aa7.89□□□□□ -1.15
PKP4-217ENST00000628904 MDH1P40925 334 aaKnown RBP7.89□□□□□ -1.15
PKP4-217ENST00000628904 ATN1P54259 1190 aaPredicted RBP7.89□□□□□ -1.15
PKP4-217ENST00000628904 MAP3K7CLP57077 242 aa7.89□□□□□ -1.15
PKP4-217ENST00000628904 RBP5P82980 135 aa7.89□□□□□ -1.15
PKP4-217ENST00000628904 OGDHQ02218 1023 aa7.89□□□□□ -1.15
PKP4-217ENST00000628904 ITKQ08881 620 aa7.89□□□□□ -1.15
PKP4-217ENST00000628904 PPIL2Q13356 520 aa7.89□□□□□ -1.15
PKP4-217ENST00000628904 PPP1R26Q5T8A7 1209 aaPredicted RBP7.89□□□□□ -1.15
PKP4-217ENST00000628904 SDHAF4Q5VUM1 108 aa7.89□□□□□ -1.15
PKP4-217ENST00000628904 RFX8Q6ZV50 586 aa7.89□□□□□ -1.15
PKP4-217ENST00000628904 ENOSF1Q7L5Y1 443 aa7.89□□□□□ -1.15
PKP4-217ENST00000628904 WDR49Q8IV35 697 aa7.89□□□□□ -1.15
PKP4-217ENST00000628904 CACNA2D3Q8IZS8 1091 aa7.89□□□□□ -1.15
PKP4-217ENST00000628904 CCDC110Q8TBZ0 833 aa7.89□□□□□ -1.15
PKP4-217ENST00000628904 SLC2A14Q8TDB8 520 aa7.89□□□□□ -1.15
PKP4-217ENST00000628904 GPR152Q8TDT2 470 aa7.89□□□□□ -1.15
PKP4-217ENST00000628904 TTC17Q96AE7 1141 aa7.89□□□□□ -1.15
PKP4-217ENST00000628904 SNF8Q96H20 258 aa7.89□□□□□ -1.15
PKP4-217ENST00000628904 TMEM176AQ96HP8 235 aa7.89□□□□□ -1.15
PKP4-217ENST00000628904 PPP1R36Q96LQ0 422 aa7.89□□□□□ -1.15
PKP4-217ENST00000628904 TRIM56Q9BRZ2 755 aaKnown RBP7.89□□□□□ -1.15
PKP4-217ENST00000628904 SPC25Q9HBM1 224 aa7.89□□□□□ -1.15
PKP4-217ENST00000628904 BAIAP2L1Q9UHR4 511 aa7.89□□□□□ -1.15
PKP4-217ENST00000628904 FEZ2Q9UHY8 353 aaPredicted RBP7.89□□□□□ -1.15
PKP4-217ENST00000628904 PPFIA4O75335 1185 aa7.89□□□□□ -1.15
PKP4-217ENST00000628904 ASS1P00966 412 aaKnown RBP7.89□□□□□ -1.15
PKP4-217ENST00000628904 CHRM1P11229 460 aaPredicted RBP7.89□□□□□ -1.15
PKP4-217ENST00000628904 MIPP30301 263 aa7.89□□□□□ -1.15
PKP4-217ENST00000628904 GNL1P36915 607 aaPredicted RBP7.89□□□□□ -1.15
PKP4-217ENST00000628904 GTF2A2P52657 109 aa7.89□□□□□ -1.15
PKP4-217ENST00000628904 HTRA3P83110 453 aa7.89□□□□□ -1.15
PKP4-217ENST00000628904 OVGP1Q12889 678 aa7.89□□□□□ -1.15
PKP4-217ENST00000628904 E2F5Q15329 346 aa7.89□□□□□ -1.15
PKP4-217ENST00000628904 NFIL3Q16649 462 aa7.89□□□□□ -1.15
PKP4-217ENST00000628904 SLC10A6Q3KNW5 377 aa7.89□□□□□ -1.15
PKP4-217ENST00000628904 DCLK2Q8N568 766 aa7.89□□□□□ -1.15
PKP4-217ENST00000628904 GRK7Q8WTQ7 553 aa7.89□□□□□ -1.15
PKP4-217ENST00000628904 TRIM11Q96F44 468 aa7.89□□□□□ -1.15
PKP4-217ENST00000628904 PARK7Q99497 189 aaKnown RBP7.89□□□□□ -1.15
PKP4-217ENST00000628904 FGFR1OP2Q9NVK5 253 aa7.89□□□□□ -1.15
PKP4-217ENST00000628904 MARCOQ9UEW3 520 aaPredicted RBP7.89□□□□□ -1.15
PKP4-217ENST00000628904 TMEM120BA0PK00 339 aa7.88□□□□□ -1.15
PKP4-217ENST00000628904 EIF3HO15372 352 aaKnown RBP eCLIP7.88□□□□□ -1.15
PKP4-217ENST00000628904 ERBB2P04626 1255 aa7.88□□□□□ -1.15
PKP4-217ENST00000628904 IGFBP6P24592 240 aaPredicted RBP7.88□□□□□ -1.15
PKP4-217ENST00000628904 MLH1P40692 756 aa7.88□□□□□ -1.15
PKP4-217ENST00000628904 YWHAEP62258 255 aaKnown RBP7.88□□□□□ -1.15
PKP4-217ENST00000628904 GKAP1Q5VSY0 366 aaPredicted RBP7.88□□□□□ -1.15
PKP4-217ENST00000628904 DNAAF3Q8N9W5 541 aa7.88□□□□□ -1.15
PKP4-217ENST00000628904 BEST2Q8NFU1 509 aa7.88□□□□□ -1.15
PKP4-217ENST00000628904 FAM172AQ8WUF8 416 aa7.88□□□□□ -1.15
PKP4-217ENST00000628904 NTPCRQ9BSD7 190 aaKnown RBP7.88□□□□□ -1.15
PKP4-217ENST00000628904 ELOVL4Q9GZR5 314 aa7.88□□□□□ -1.15
PKP4-217ENST00000628904 HMGB1P1B2RPK0 211 aaPredicted RBP7.88□□□□□ -1.15
PKP4-217ENST00000628904 GOLGA8TH3BQL2 631 aa7.88□□□□□ -1.15
PKP4-217ENST00000628904 KCNK1O00180 336 aa7.88□□□□□ -1.15
PKP4-217ENST00000628904 C2CD2LO14523 706 aa7.88□□□□□ -1.15
PKP4-217ENST00000628904 SLC26A4O43511 780 aa7.88□□□□□ -1.15
PKP4-217ENST00000628904 RPS6KA5O75582 802 aa7.88□□□□□ -1.15
PKP4-217ENST00000628904 PECAM1P16284 738 aaPredicted RBP7.88□□□□□ -1.15
PKP4-217ENST00000628904 CTCFP49711 727 aaPredicted RBP7.88□□□□□ -1.15
PKP4-217ENST00000628904 AFF1P51825 1210 aaKnown RBP7.88□□□□□ -1.15
PKP4-217ENST00000628904 SPARCL1Q14515 664 aa7.88□□□□□ -1.15
PKP4-217ENST00000628904 MTHFD1LQ6UB35 978 aa7.88□□□□□ -1.15
PKP4-217ENST00000628904 C3orf62Q6ZUJ4 267 aa7.88□□□□□ -1.15
PKP4-217ENST00000628904 ANKS1BQ7Z6G8 1248 aa7.88□□□□□ -1.15
PKP4-217ENST00000628904 TBC1D1Q86TI0 1168 aaPredicted RBP7.88□□□□□ -1.15
PKP4-217ENST00000628904 PLCD3Q8N3E9 789 aa7.88□□□□□ -1.15
PKP4-217ENST00000628904 KIF2BQ8N4N8 673 aa7.88□□□□□ -1.15
PKP4-217ENST00000628904 PABPC3Q9H361 631 aaKnown RBP7.88□□□□□ -1.15
PKP4-217ENST00000628904 INTUQ9ULD6 942 aa7.88□□□□□ -1.15
PKP4-217ENST00000628904 USP18Q9UMW8 372 aa7.88□□□□□ -1.15
PKP4-217ENST00000628904 TRPA1O75762 1119 aa7.88□□□□□ -1.15
PKP4-217ENST00000628904 DNAJC3Q13217 504 aa7.88□□□□□ -1.15
PKP4-217ENST00000628904 DHX34Q14147 1143 aaKnown RBP7.88□□□□□ -1.15
PKP4-217ENST00000628904 MDH1BQ5I0G3 518 aa7.88□□□□□ -1.15
PKP4-217ENST00000628904 TAOK1Q7L7X3 1001 aa7.88□□□□□ -1.15
PKP4-217ENST00000628904 CALR3Q96L12 384 aaKnown RBP7.88□□□□□ -1.15
PKP4-217ENST00000628904 ZIC5Q96T25 663 aa7.88□□□□□ -1.15
PKP4-217ENST00000628904 RHOBTB2Q9BYZ6 727 aa7.88□□□□□ -1.15
PKP4-217ENST00000628904 ARHGAP39Q9C0H5 1083 aa7.88□□□□□ -1.15
PKP4-217ENST00000628904 SDCBP2Q9H190 292 aa7.88□□□□□ -1.15
PKP4-217ENST00000628904 ACSS2Q9NR19 701 aa7.88□□□□□ -1.15
PKP4-217ENST00000628904 TXNDC16Q9P2K2 825 aa7.88□□□□□ -1.15
PKP4-217ENST00000628904 ANKRD31Q8N7Z5 1873 aa7.88□□□□□ -1.15
PKP4-217ENST00000628904 NFASCO94856 1347 aa7.87□□□□□ -1.15
PKP4-217ENST00000628904 A0A0A6YYK5 440 aaPredicted RBP7.87□□□□□ -1.15
PKP4-217ENST00000628904 ATP9BO43861 1147 aa7.87□□□□□ -1.15
PKP4-217ENST00000628904 STBD1O95210 358 aa7.87□□□□□ -1.15
PKP4-217ENST00000628904 SMIM10L2AP0DMW4 78 aa7.87□□□□□ -1.15
PKP4-217ENST00000628904 SMIM10L2BP0DMW5 78 aa7.87□□□□□ -1.15
PKP4-217ENST00000628904 MAGEA4P43358 317 aa7.87□□□□□ -1.15
PKP4-217ENST00000628904 EFTUD2Q15029 972 aaKnown RBP eCLIP7.87□□□□□ -1.153e-7■■□□□ 13.7
PKP4-217ENST00000628904 SPOUT1Q5T280 376 aaKnown RBP7.87□□□□□ -1.15
PKP4-217ENST00000628904 DPY19L2P1Q6NXN4 242 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms