RNA–Protein interactions for RNA: ENST00000628614.1

SPTAN1-214, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTAN1, Length 993 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-214ENST00000628614 CASP4P49662 377 aa18.39■□□□□ 0.53
SPTAN1-214ENST00000628614 PSMC1P62191 440 aaKnown RBP18.39■□□□□ 0.53
SPTAN1-214ENST00000628614 DPYDQ12882 1025 aa18.39■□□□□ 0.53
SPTAN1-214ENST00000628614 BIRC3Q13489 604 aa18.39■□□□□ 0.53
SPTAN1-214ENST00000628614 DDR2Q16832 855 aa18.39■□□□□ 0.53
SPTAN1-214ENST00000628614 CCDC142Q17RM4 750 aa18.39■□□□□ 0.53
SPTAN1-214ENST00000628614 WDR72Q3MJ13 1102 aa18.39■□□□□ 0.53
SPTAN1-214ENST00000628614 ZNF516Q92618 1163 aa18.39■□□□□ 0.53
SPTAN1-214ENST00000628614 TRMT2BQ96GJ1 504 aaKnown RBP18.39■□□□□ 0.53
SPTAN1-214ENST00000628614 MSANTD3Q96H12 275 aa18.39■□□□□ 0.53
SPTAN1-214ENST00000628614 SNX25Q9H3E2 840 aa18.39■□□□□ 0.53
SPTAN1-214ENST00000628614 GDPD2Q9HCC8 539 aa18.39■□□□□ 0.53
SPTAN1-214ENST00000628614 MAGEC2Q9UBF1 373 aaPredicted RBP18.39■□□□□ 0.53
SPTAN1-214ENST00000628614 MTF2Q9Y483 593 aaPredicted RBP18.39■□□□□ 0.53
SPTAN1-214ENST00000628614 PIAS3Q9Y6X2 628 aa18.39■□□□□ 0.53
SPTAN1-214ENST00000628614 LRRIQ3A6PVS8 624 aaPredicted RBP18.38■□□□□ 0.53
SPTAN1-214ENST00000628614 SOBPA7XYQ1 873 aa18.38■□□□□ 0.53
SPTAN1-214ENST00000628614 ARNTLO00327 626 aa18.38■□□□□ 0.53
SPTAN1-214ENST00000628614 NOL4O94818 638 aa18.38■□□□□ 0.53
SPTAN1-214ENST00000628614 ZNF202O95125 648 aa18.38■□□□□ 0.53
SPTAN1-214ENST00000628614 F11P03951 625 aa18.38■□□□□ 0.53
SPTAN1-214ENST00000628614 PDGFRBP09619 1106 aa18.38■□□□□ 0.53
SPTAN1-214ENST00000628614 GNL1P36915 607 aaPredicted RBP18.38■□□□□ 0.53
SPTAN1-214ENST00000628614 RPS9P46781 194 aaKnown RBP18.38■□□□□ 0.53
SPTAN1-214ENST00000628614 MLLT6P55198 1093 aaPredicted RBP18.38■□□□□ 0.53
SPTAN1-214ENST00000628614 CLDN10P78369 228 aa18.38■□□□□ 0.53
SPTAN1-214ENST00000628614 NUCB2P80303 420 aa18.38■□□□□ 0.53
SPTAN1-214ENST00000628614 ARHGAP29Q52LW3 1261 aa18.38■□□□□ 0.53
SPTAN1-214ENST00000628614 SDHAF4Q5VUM1 108 aa18.38■□□□□ 0.53
SPTAN1-214ENST00000628614 VSTM1Q6UX27 236 aa18.38■□□□□ 0.53
SPTAN1-214ENST00000628614 FRMD5Q7Z6J6 570 aa18.38■□□□□ 0.53
SPTAN1-214ENST00000628614 CMTM8Q8IZV2 173 aa18.38■□□□□ 0.53
SPTAN1-214ENST00000628614 PLEKHO2Q8TD55 490 aa18.38■□□□□ 0.53
SPTAN1-214ENST00000628614 MRPS31Q92665 395 aaKnown RBP18.38■□□□□ 0.53
SPTAN1-214ENST00000628614 MYLPFQ96A32 169 aa18.38■□□□□ 0.53
SPTAN1-214ENST00000628614 CLDN23Q96B33 292 aa18.38■□□□□ 0.53
SPTAN1-214ENST00000628614 MRPL45Q9BRJ2 306 aaKnown RBP18.38■□□□□ 0.53
SPTAN1-214ENST00000628614 XYLT2Q9H1B5 865 aa18.38■□□□□ 0.53
SPTAN1-214ENST00000628614 VRTNQ9H8Y1 702 aa18.38■□□□□ 0.53
SPTAN1-214ENST00000628614 CRTAC1Q9NQ79 661 aa18.38■□□□□ 0.53
SPTAN1-214ENST00000628614 FRMD4BQ9Y2L6 1034 aa18.38■□□□□ 0.53
SPTAN1-214ENST00000628614 COL4A2P08572 1712 aa18.37■□□□□ 0.53
SPTAN1-214ENST00000628614 NUP210Q8TEM1 1887 aaPredicted RBP18.37■□□□□ 0.53
SPTAN1-214ENST00000628614 VPS13AQ96RL7 3174 aa18.37■□□□□ 0.53
SPTAN1-214ENST00000628614 SLC38A8A6NNN8 435 aa18.37■□□□□ 0.53
SPTAN1-214ENST00000628614 ATP2C2O75185 946 aa18.37■□□□□ 0.53
SPTAN1-214ENST00000628614 CLSTN1O94985 981 aa18.37■□□□□ 0.53
SPTAN1-214ENST00000628614 PRAMEF12O95522 483 aa18.37■□□□□ 0.53
SPTAN1-214ENST00000628614 AVPR1AP37288 418 aa18.37■□□□□ 0.53
SPTAN1-214ENST00000628614 MYL6P60660 151 aa18.37■□□□□ 0.53
SPTAN1-214ENST00000628614 PLCB2Q00722 1185 aa18.37■□□□□ 0.53
SPTAN1-214ENST00000628614 KCNB1Q14721 858 aa18.37■□□□□ 0.53
SPTAN1-214ENST00000628614 ZNF699Q32M78 642 aa18.37■□□□□ 0.53
SPTAN1-214ENST00000628614 TDRD10Q5VZ19 366 aaKnown RBP18.37■□□□□ 0.53
SPTAN1-214ENST00000628614 C1orf228Q6PIY5 440 aa18.37■□□□□ 0.53
SPTAN1-214ENST00000628614 TMEM150AQ86TG1 271 aa18.37■□□□□ 0.53
SPTAN1-214ENST00000628614 SCN4BQ8IWT1 228 aa18.37■□□□□ 0.53
SPTAN1-214ENST00000628614 CELF5Q8N6W0 485 aaKnown RBP18.37■□□□□ 0.53
SPTAN1-214ENST00000628614 STKLD1Q8NE28 680 aa18.37■□□□□ 0.53
SPTAN1-214ENST00000628614 OR6B3Q8NGW1 331 aa18.37■□□□□ 0.53
SPTAN1-214ENST00000628614 MYCBPAPQ8TBZ2 947 aa18.37■□□□□ 0.53
SPTAN1-214ENST00000628614 BPIFB1Q8TDL5 484 aa18.37■□□□□ 0.53
SPTAN1-214ENST00000628614 NKD2Q969F2 451 aaPredicted RBP18.37■□□□□ 0.53
SPTAN1-214ENST00000628614 MYRFLQ96LU7 910 aa18.37■□□□□ 0.53
SPTAN1-214ENST00000628614 CEP295NLQ96MC4 621 aa18.37■□□□□ 0.53
SPTAN1-214ENST00000628614 SLC46A2Q9BY10 475 aa18.37■□□□□ 0.53
SPTAN1-214ENST00000628614 C8orf33Q9H7E9 229 aaPredicted RBP18.37■□□□□ 0.53
SPTAN1-214ENST00000628614 SPATA6Q9NWH7 488 aaPredicted RBP18.37■□□□□ 0.53
SPTAN1-214ENST00000628614 NXF1Q9UBU9 619 aaKnown RBP18.37■□□□□ 0.53
SPTAN1-214ENST00000628614 TRAF3IP3Q9Y228 551 aa18.37■□□□□ 0.53
SPTAN1-214ENST00000628614 MIA3Q5JRA6 1907 aa18.37■□□□□ 0.53
SPTAN1-214ENST00000628614 GOLGA6L4A6NEF3 574 aa18.36■□□□□ 0.53
SPTAN1-214ENST00000628614 SHISA7A6NL88 538 aa18.36■□□□□ 0.53
SPTAN1-214ENST00000628614 LAMTOR5O43504 91 aa18.36■□□□□ 0.53
SPTAN1-214ENST00000628614 C4BPAP04003 597 aaKnown RBP18.36■□□□□ 0.53
SPTAN1-214ENST00000628614 CYP27A1Q02318 531 aa18.36■□□□□ 0.53
SPTAN1-214ENST00000628614 NCOA4Q13772 614 aa18.36■□□□□ 0.53
SPTAN1-214ENST00000628614 NFIL3Q16649 462 aa18.36■□□□□ 0.53
SPTAN1-214ENST00000628614 CEP135Q66GS9 1140 aa18.36■□□□□ 0.53
SPTAN1-214ENST00000628614 ZC3H14Q6PJT7 736 aaKnown RBP18.36■□□□□ 0.53
SPTAN1-214ENST00000628614 GPIHBP1Q8IV16 184 aa18.36■□□□□ 0.53
SPTAN1-214ENST00000628614 GUF1Q8N442 669 aaKnown RBP18.36■□□□□ 0.53
SPTAN1-214ENST00000628614 MAB21L3Q8N8X9 362 aa18.36■□□□□ 0.53
SPTAN1-214ENST00000628614 TMC2Q8TDI7 906 aa18.36■□□□□ 0.53
SPTAN1-214ENST00000628614 FAM3CQ92520 227 aa18.36■□□□□ 0.53
SPTAN1-214ENST00000628614 PCED1BQ96HM7 432 aa18.36■□□□□ 0.53
SPTAN1-214ENST00000628614 SPATA17Q96L03 361 aa18.36■□□□□ 0.53
SPTAN1-214ENST00000628614 LRRC3BQ96PB8 259 aa18.36■□□□□ 0.53
SPTAN1-214ENST00000628614 KIF9Q9HAQ2 790 aa18.36■□□□□ 0.53
SPTAN1-214ENST00000628614 THG1LQ9NWX6 298 aaKnown RBP18.36■□□□□ 0.53
SPTAN1-214ENST00000628614 NDRG2Q9UN36 371 aaKnown RBP18.36■□□□□ 0.53
SPTAN1-214ENST00000628614 PRR23AA6NEV1 266 aa18.35■□□□□ 0.53
SPTAN1-214ENST00000628614 TRIM66O15016 1216 aa18.35■□□□□ 0.53
SPTAN1-214ENST00000628614 MAPK13O15264 365 aa18.35■□□□□ 0.53
SPTAN1-214ENST00000628614 BDNFP23560 247 aa18.35■□□□□ 0.53
SPTAN1-214ENST00000628614 ANXA13P27216 316 aa18.35■□□□□ 0.53
SPTAN1-214ENST00000628614 GRIK1P39086 918 aa18.35■□□□□ 0.53
SPTAN1-214ENST00000628614 KPNA1P52294 538 aaPredicted RBP18.35■□□□□ 0.53
SPTAN1-214ENST00000628614 ZNF667Q5HYK9 610 aa18.35■□□□□ 0.53
SPTAN1-214ENST00000628614 MDH1BQ5I0G3 518 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms