RNA–Protein interactions for RNA: ENST00000628509.1

FOXCUT-201, FOXC1 upstream transcript, humanhuman

TSL 3 BASIC

Gene FOXCUT, Length 333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXCUT-201ENST00000628509 SDCBP2Q9H190 292 aa10.73□□□□□ -0.69
FOXCUT-201ENST00000628509 LRRC4Q9HBW1 653 aa10.73□□□□□ -0.69
FOXCUT-201ENST00000628509 PNPLA8Q9NP80 782 aa10.73□□□□□ -0.69
FOXCUT-201ENST00000628509 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.73□□□□□ -0.69
FOXCUT-201ENST00000628509 SPG21Q9NZD8 308 aa10.73□□□□□ -0.69
FOXCUT-201ENST00000628509 RNF14Q9UBS8 474 aa10.73□□□□□ -0.69
FOXCUT-201ENST00000628509 DNAI1Q9UI46 699 aa10.73□□□□□ -0.69
FOXCUT-201ENST00000628509 MAFFQ9ULX9 164 aa10.73□□□□□ -0.69
FOXCUT-201ENST00000628509 NENFQ9UMX5 172 aa10.73□□□□□ -0.69
FOXCUT-201ENST00000628509 PRG3Q9Y2Y8 225 aaPredicted RBP10.73□□□□□ -0.69
FOXCUT-201ENST00000628509 REXO2Q9Y3B8 237 aaKnown RBP10.73□□□□□ -0.69
FOXCUT-201ENST00000628509 PPEF2O14830 753 aa10.72□□□□□ -0.69
FOXCUT-201ENST00000628509 ZNF263O14978 683 aa10.72□□□□□ -0.69
FOXCUT-201ENST00000628509 XPO1O14980 1071 aaKnown RBP10.72□□□□□ -0.69
FOXCUT-201ENST00000628509 SPTLC1O15269 473 aa10.72□□□□□ -0.69
FOXCUT-201ENST00000628509 LPXNO60711 386 aa10.72□□□□□ -0.69
FOXCUT-201ENST00000628509 MTA2O94776 668 aa10.72□□□□□ -0.69
FOXCUT-201ENST00000628509 MICAL2O94851 1124 aa10.72□□□□□ -0.69
FOXCUT-201ENST00000628509 CYP1A2P05177 515 aa10.72□□□□□ -0.69
FOXCUT-201ENST00000628509 GALTP07902 379 aa10.72□□□□□ -0.69
FOXCUT-201ENST00000628509 NPR3P17342 541 aa10.72□□□□□ -0.69
FOXCUT-201ENST00000628509 TCP1P17987 556 aaKnown RBP10.72□□□□□ -0.69
FOXCUT-201ENST00000628509 PIGHQ14442 188 aaPredicted RBP10.72□□□□□ -0.69
FOXCUT-201ENST00000628509 ACAP1Q15027 740 aa10.72□□□□□ -0.69
FOXCUT-201ENST00000628509 ODF2Q5BJF6 829 aa10.72□□□□□ -0.69
FOXCUT-201ENST00000628509 INTS6LQ5JSJ4 861 aaKnown RBP10.72□□□□□ -0.69
FOXCUT-201ENST00000628509 FAM171A1Q5VUB5 890 aa10.72□□□□□ -0.69
FOXCUT-201ENST00000628509 C11orf63Q6NUN7 778 aa10.72□□□□□ -0.69
FOXCUT-201ENST00000628509 FUT10Q6P4F1 479 aa10.72□□□□□ -0.69
FOXCUT-201ENST00000628509 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.72□□□□□ -0.69
FOXCUT-201ENST00000628509 ZNF365Q70YC5 407 aa10.72□□□□□ -0.69
FOXCUT-201ENST00000628509 OTOP2Q7RTS6 562 aa10.72□□□□□ -0.69
FOXCUT-201ENST00000628509 DAAM2Q86T65 1068 aa10.72□□□□□ -0.69
FOXCUT-201ENST00000628509 ZNF280BQ86YH2 543 aa10.72□□□□□ -0.69
FOXCUT-201ENST00000628509 C3orf20Q8ND61 904 aa10.72□□□□□ -0.69
FOXCUT-201ENST00000628509 SLC35G2Q8TBE7 412 aa10.72□□□□□ -0.69
FOXCUT-201ENST00000628509 CPA5Q8WXQ8 436 aa10.72□□□□□ -0.69
FOXCUT-201ENST00000628509 SAMD11Q96NU1 681 aa10.72□□□□□ -0.69
FOXCUT-201ENST00000628509 RAD9AQ99638 391 aa10.72□□□□□ -0.69
FOXCUT-201ENST00000628509 TTPALQ9BTX7 342 aa10.72□□□□□ -0.69
FOXCUT-201ENST00000628509 DUSP16Q9BY84 665 aa10.72□□□□□ -0.69
FOXCUT-201ENST00000628509 THAP2Q9H0W7 228 aa10.72□□□□□ -0.69
FOXCUT-201ENST00000628509 OCEL1Q9H607 264 aa10.72□□□□□ -0.69
FOXCUT-201ENST00000628509 ABCB6Q9NP58 842 aa10.72□□□□□ -0.69
FOXCUT-201ENST00000628509 ST7Q9NRC1 585 aa10.72□□□□□ -0.69
FOXCUT-201ENST00000628509 RNF19AQ9NV58 838 aa10.72□□□□□ -0.69
FOXCUT-201ENST00000628509 IP6K2Q9UHH9 426 aa10.72□□□□□ -0.69
FOXCUT-201ENST00000628509 AMFRQ9UKV5 643 aa10.72□□□□□ -0.69
FOXCUT-201ENST00000628509 PCDHGC5Q9Y5F6 944 aa10.72□□□□□ -0.69
FOXCUT-201ENST00000628509 USP27XA6NNY8 438 aa10.71□□□□□ -0.69
FOXCUT-201ENST00000628509 TRIM66O15016 1216 aa10.71□□□□□ -0.69
FOXCUT-201ENST00000628509 RNF8O76064 485 aa10.71□□□□□ -0.69
FOXCUT-201ENST00000628509 GJB5O95377 273 aa10.71□□□□□ -0.69
FOXCUT-201ENST00000628509 URODP06132 367 aa10.71□□□□□ -0.69
FOXCUT-201ENST00000628509 PRLRP16471 622 aa10.71□□□□□ -0.69
FOXCUT-201ENST00000628509 BRCC3P46736 316 aa10.71□□□□□ -0.69
FOXCUT-201ENST00000628509 PLA2G4AP47712 749 aa10.71□□□□□ -0.69
FOXCUT-201ENST00000628509 SLC11A1P49279 550 aa10.71□□□□□ -0.69
FOXCUT-201ENST00000628509 CKAP4Q07065 602 aaKnown RBP10.71□□□□□ -0.69
FOXCUT-201ENST00000628509 PDCLQ13371 301 aa10.71□□□□□ -0.69
FOXCUT-201ENST00000628509 CTXN3Q4LDR2 81 aa10.71□□□□□ -0.69
FOXCUT-201ENST00000628509 FNDC1Q4ZHG4 1894 aaPredicted RBP10.71□□□□□ -0.69
FOXCUT-201ENST00000628509 PAN2Q504Q3 1202 aaKnown RBP10.71□□□□□ -0.69
FOXCUT-201ENST00000628509 EFHC1Q5JVL4 640 aa10.71□□□□□ -0.69
FOXCUT-201ENST00000628509 PPP1R26Q5T8A7 1209 aaPredicted RBP10.71□□□□□ -0.69
FOXCUT-201ENST00000628509 ELMSAN1Q6PJG2 1045 aa10.71□□□□□ -0.69
FOXCUT-201ENST00000628509 KCNT2Q6UVM3 1135 aa10.71□□□□□ -0.69
FOXCUT-201ENST00000628509 VSTM1Q6UX27 236 aa10.71□□□□□ -0.69
FOXCUT-201ENST00000628509 SYT10Q6XYQ8 523 aa10.71□□□□□ -0.69
FOXCUT-201ENST00000628509 MON1BQ7L1V2 547 aa10.71□□□□□ -0.69
FOXCUT-201ENST00000628509 PEX26Q7Z412 305 aa10.71□□□□□ -0.69
FOXCUT-201ENST00000628509 CEP57Q86XR8 500 aa10.71□□□□□ -0.69
FOXCUT-201ENST00000628509 GPIHBP1Q8IV16 184 aa10.71□□□□□ -0.69
FOXCUT-201ENST00000628509 PASD1Q8IV76 773 aa10.71□□□□□ -0.69
FOXCUT-201ENST00000628509 SIX6OS1Q8N1H7 587 aa10.71□□□□□ -0.69
FOXCUT-201ENST00000628509 MNS1Q8NEH6 495 aa10.71□□□□□ -0.69
FOXCUT-201ENST00000628509 ZNF564Q8TBZ8 553 aaPredicted RBP10.71□□□□□ -0.69
FOXCUT-201ENST00000628509 SPPL2BQ8TCT7 592 aa10.71□□□□□ -0.69
FOXCUT-201ENST00000628509 TFAP2BQ92481 460 aa10.71□□□□□ -0.69
FOXCUT-201ENST00000628509 ZNF689Q96CS4 500 aaPredicted RBP10.71□□□□□ -0.69
FOXCUT-201ENST00000628509 ABHD8Q96I13 439 aa10.71□□□□□ -0.69
FOXCUT-201ENST00000628509 PCDHB18PQ96TA0 734 aa10.71□□□□□ -0.69
FOXCUT-201ENST00000628509 NAP1L3Q99457 506 aaPredicted RBP10.71□□□□□ -0.69
FOXCUT-201ENST00000628509 C11orf70Q9BRQ4 267 aa10.71□□□□□ -0.69
FOXCUT-201ENST00000628509 NUP85Q9BW27 656 aa10.71□□□□□ -0.69
FOXCUT-201ENST00000628509 LACRTQ9GZZ8 138 aa10.71□□□□□ -0.69
FOXCUT-201ENST00000628509 CXCL16Q9H2A7 254 aa10.71□□□□□ -0.69
FOXCUT-201ENST00000628509 DMAP1Q9NPF5 467 aaPredicted RBP10.71□□□□□ -0.69
FOXCUT-201ENST00000628509 FAM49BQ9NUQ9 324 aa10.71□□□□□ -0.69
FOXCUT-201ENST00000628509 PCDHB5Q9Y5E4 795 aa10.71□□□□□ -0.69
FOXCUT-201ENST00000628509 CCDC66A2RUB6 948 aa10.7□□□□□ -0.7
FOXCUT-201ENST00000628509 CCDC85CA6NKD9 419 aa10.7□□□□□ -0.7
FOXCUT-201ENST00000628509 TLL1O43897 1013 aa10.7□□□□□ -0.7
FOXCUT-201ENST00000628509 SOD2P04179 222 aa10.7□□□□□ -0.7
FOXCUT-201ENST00000628509 ERBB2P04626 1255 aa10.7□□□□□ -0.7
FOXCUT-201ENST00000628509 GLI1P08151 1106 aa10.7□□□□□ -0.7
FOXCUT-201ENST00000628509 ACRP10323 421 aa10.7□□□□□ -0.7
FOXCUT-201ENST00000628509 KRT3P12035 628 aa10.7□□□□□ -0.7
FOXCUT-201ENST00000628509 CPB1P15086 417 aa10.7□□□□□ -0.7
FOXCUT-201ENST00000628509 ATP2A2P16615 1042 aaKnown RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms