RNA–Protein interactions for RNA: ENST00000628124.2

GABRB3-216, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2 BASIC

Gene GABRB3, Length 5,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-216ENST00000628124 ETFBP38117 255 aa9.27□□□□□ -0.93
GABRB3-216ENST00000628124 MRPS25P82663 173 aaKnown RBP9.27□□□□□ -0.93
GABRB3-216ENST00000628124 CDH18Q13634 790 aa9.27□□□□□ -0.93
GABRB3-216ENST00000628124 NFIL3Q16649 462 aa9.27□□□□□ -0.93
GABRB3-216ENST00000628124 PTPN21Q16825 1174 aa9.27□□□□□ -0.93
GABRB3-216ENST00000628124 PDZK1Q5T2W1 519 aa9.27□□□□□ -0.93
GABRB3-216ENST00000628124 PRMT9Q6P2P2 845 aa9.27□□□□□ -0.93
GABRB3-216ENST00000628124 TRPM8Q7Z2W7 1104 aa9.27□□□□□ -0.93
GABRB3-216ENST00000628124 IPMKQ8NFU5 416 aa9.27□□□□□ -0.93
GABRB3-216ENST00000628124 IL17RAQ96F46 866 aa9.27□□□□□ -0.93
GABRB3-216ENST00000628124 SEPT5Q99719 369 aaPredicted RBP9.27□□□□□ -0.93
GABRB3-216ENST00000628124 NT5C1AQ9BXI3 368 aa9.27□□□□□ -0.93
GABRB3-216ENST00000628124 REXO4Q9GZR2 422 aaKnown RBP9.27□□□□□ -0.93
GABRB3-216ENST00000628124 OSBPL5Q9H0X9 879 aaPredicted RBP9.27□□□□□ -0.93
GABRB3-216ENST00000628124 GANQ9H2C0 597 aa9.27□□□□□ -0.93
GABRB3-216ENST00000628124 HMG20AQ9NP66 347 aa9.27□□□□□ -0.93
GABRB3-216ENST00000628124 PIK3CDO00329 1044 aa9.27□□□□□ -0.93
GABRB3-216ENST00000628124 EGFRP00533 1210 aa9.27□□□□□ -0.93
GABRB3-216ENST00000628124 ITGA4P13612 1032 aa9.27□□□□□ -0.93
GABRB3-216ENST00000628124 RFX3P48380 749 aa9.27□□□□□ -0.93
GABRB3-216ENST00000628124 PCSK7Q16549 785 aa9.27□□□□□ -0.93
GABRB3-216ENST00000628124 CLEC16AQ2KHT3 1053 aa9.27□□□□□ -0.93
GABRB3-216ENST00000628124 KLHL12Q53G59 568 aa9.27□□□□□ -0.93
GABRB3-216ENST00000628124 ATAD3BQ5T9A4 648 aa9.27□□□□□ -0.93
GABRB3-216ENST00000628124 HLA-DQA1Q5Y7H0 255 aa9.27□□□□□ -0.93
GABRB3-216ENST00000628124 FBXO42Q6P3S6 717 aa9.27□□□□□ -0.93
GABRB3-216ENST00000628124 MTSS1LQ765P7 747 aa9.27□□□□□ -0.93
GABRB3-216ENST00000628124 ZNF677Q86XU0 584 aa9.27□□□□□ -0.93
GABRB3-216ENST00000628124 ZNF473Q8WTR7 871 aaKnown RBP9.27□□□□□ -0.93
GABRB3-216ENST00000628124 MAGED4Q96JG8 741 aa9.27□□□□□ -0.93
GABRB3-216ENST00000628124 TRIT1Q9H3H1 467 aaKnown RBP9.27□□□□□ -0.93
GABRB3-216ENST00000628124 MANSC1Q9H8J5 431 aa9.27□□□□□ -0.93
GABRB3-216ENST00000628124 JPH1Q9HDC5 661 aaPredicted RBP9.27□□□□□ -0.93
GABRB3-216ENST00000628124 AMACRQ9UHK6 382 aa9.27□□□□□ -0.93
GABRB3-216ENST00000628124 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.26□□□□□ -0.93
GABRB3-216ENST00000628124 GLRA3O75311 464 aa9.26□□□□□ -0.93
GABRB3-216ENST00000628124 DDHD2O94830 711 aa9.26□□□□□ -0.93
GABRB3-216ENST00000628124 KRT6AP02538 564 aa9.26□□□□□ -0.93
GABRB3-216ENST00000628124 HMBSP08397 361 aa9.26□□□□□ -0.93
GABRB3-216ENST00000628124 PAICSP22234 425 aaKnown RBP9.26□□□□□ -0.93
GABRB3-216ENST00000628124 ZNF177Q13360 481 aaPredicted RBP9.26□□□□□ -0.93
GABRB3-216ENST00000628124 TDRD10Q5VZ19 366 aaKnown RBP9.26□□□□□ -0.93
GABRB3-216ENST00000628124 TYW3Q6IPR3 259 aaKnown RBP9.26□□□□□ -0.93
GABRB3-216ENST00000628124 OTOAQ7RTW8 1153 aa9.26□□□□□ -0.93
GABRB3-216ENST00000628124 RDM1Q8NG50 284 aa9.26□□□□□ -0.93
GABRB3-216ENST00000628124 CCDC3Q9BQI4 270 aa9.26□□□□□ -0.93
GABRB3-216ENST00000628124 UBE2OQ9C0C9 1292 aaKnown RBP9.26□□□□□ -0.93
GABRB3-216ENST00000628124 STK39Q9UEW8 545 aa9.26□□□□□ -0.93
GABRB3-216ENST00000628124 COQ6Q9Y2Z9 468 aa9.26□□□□□ -0.93
GABRB3-216ENST00000628124 ADGRG1Q9Y653 693 aa9.26□□□□□ -0.93
GABRB3-216ENST00000628124 ABCC10Q5T3U5 1492 aa9.26□□□□□ -0.93
GABRB3-216ENST00000628124 PLEKHG2Q9H7P9 1386 aa9.26□□□□□ -0.93
GABRB3-216ENST00000628124 UTYO14607 1347 aa9.26□□□□□ -0.93
GABRB3-216ENST00000628124 MFN2O95140 757 aa9.26□□□□□ -0.93
GABRB3-216ENST00000628124 WARSP23381 471 aaKnown RBP9.26□□□□□ -0.93
GABRB3-216ENST00000628124 IFNGR2P38484 337 aa9.26□□□□□ -0.93
GABRB3-216ENST00000628124 RFC5P40937 340 aa9.26□□□□□ -0.93
GABRB3-216ENST00000628124 KCNB1Q14721 858 aa9.26□□□□□ -0.93
GABRB3-216ENST00000628124 SMAD1Q15797 465 aaKnown RBP9.26□□□□□ -0.93
GABRB3-216ENST00000628124 MGAT5BQ3V5L5 792 aa9.26□□□□□ -0.93
GABRB3-216ENST00000628124 CLEC4GQ6UXB4 293 aa9.26□□□□□ -0.93
GABRB3-216ENST00000628124 UNC45BQ8IWX7 931 aa9.26□□□□□ -0.93
GABRB3-216ENST00000628124 CLYBLQ8N0X4 340 aa9.26□□□□□ -0.93
GABRB3-216ENST00000628124 SLC25A41Q8N5S1 370 aa9.26□□□□□ -0.93
GABRB3-216ENST00000628124 MDM1Q8TC05 714 aa9.26□□□□□ -0.93
GABRB3-216ENST00000628124 TMEM237Q96Q45 408 aa9.26□□□□□ -0.93
GABRB3-216ENST00000628124 PNKPQ96T60 521 aa9.26□□□□□ -0.93
GABRB3-216ENST00000628124 RACGAP1Q9H0H5 632 aa9.26□□□□□ -0.93
GABRB3-216ENST00000628124 IL1RL2Q9HB29 575 aa9.26□□□□□ -0.93
GABRB3-216ENST00000628124 AKAP7Q9P0M2 348 aaPredicted RBP9.26□□□□□ -0.93
GABRB3-216ENST00000628124 MARCOQ9UEW3 520 aaPredicted RBP9.26□□□□□ -0.93
GABRB3-216ENST00000628124 PLEKHG1Q9ULL1 1385 aa9.26□□□□□ -0.93
GABRB3-216ENST00000628124 NCK2O43639 380 aa9.26□□□□□ -0.93
GABRB3-216ENST00000628124 ZNF862O60290 1169 aa9.26□□□□□ -0.93
GABRB3-216ENST00000628124 CD2BP2O95400 341 aaKnown RBP9.26□□□□□ -0.93
GABRB3-216ENST00000628124 TRIM25Q14258 630 aaKnown RBP9.26□□□□□ -0.93
GABRB3-216ENST00000628124 CDH24Q86UP0 819 aa9.26□□□□□ -0.93
GABRB3-216ENST00000628124 COMMD2Q86X83 199 aa9.26□□□□□ -0.93
GABRB3-216ENST00000628124 SKA1Q96BD8 255 aa9.26□□□□□ -0.93
GABRB3-216ENST00000628124 EIF2AK1Q9BQI3 630 aaKnown RBP9.26□□□□□ -0.93
GABRB3-216ENST00000628124 TMEM47Q9BQJ4 181 aa9.26□□□□□ -0.93
GABRB3-216ENST00000628124 PUS7LQ9H0K6 701 aaKnown RBP9.26□□□□□ -0.93
GABRB3-216ENST00000628124 RNPEPQ9H4A4 650 aa9.26□□□□□ -0.93
GABRB3-216ENST00000628124 DPP7Q9UHL4 492 aa9.26□□□□□ -0.93
GABRB3-216ENST00000628124 RNF112Q9ULX5 631 aa9.26□□□□□ -0.93
GABRB3-216ENST00000628124 AAR2Q9Y312 384 aaKnown RBP9.26□□□□□ -0.93
GABRB3-216ENST00000628124 MLH3Q9UHC1 1453 aa9.26□□□□□ -0.93
GABRB3-216ENST00000628124 SSU72P8A0A1W2PR75 194 aa9.26□□□□□ -0.93
GABRB3-216ENST00000628124 TRIM49BA6NDI0 452 aa9.26□□□□□ -0.93
GABRB3-216ENST00000628124 EIF4E1BA6NMX2 242 aaKnown RBP9.26□□□□□ -0.93
GABRB3-216ENST00000628124 SMIM22K7EJ46 135 aa9.26□□□□□ -0.93
GABRB3-216ENST00000628124 TIMM44O43615 452 aa9.26□□□□□ -0.93
GABRB3-216ENST00000628124 PLEKHA8P1O95397 391 aa9.26□□□□□ -0.93
GABRB3-216ENST00000628124 TXNP10599 105 aaKnown RBP9.26□□□□□ -0.93
GABRB3-216ENST00000628124 ITGALP20701 1170 aa9.26□□□□□ -0.93
GABRB3-216ENST00000628124 GARTP22102 1010 aa9.26□□□□□ -0.93
GABRB3-216ENST00000628124 S100GP29377 79 aa9.26□□□□□ -0.93
GABRB3-216ENST00000628124 NOS3P29474 1203 aa9.26□□□□□ -0.93
GABRB3-216ENST00000628124 GRM4Q14833 912 aa9.26□□□□□ -0.93
GABRB3-216ENST00000628124 TTC23Q5W5X9 447 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms