RNA–Protein interactions for RNA: ENST00000626926.1

CPSF7-226, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5 BASIC

Gene CPSF7, Length 306 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-226ENST00000626926 DLL3Q9NYJ7 618 aa9.44□□□□□ -0.9
CPSF7-226ENST00000626926 GTSE1Q9NYZ3 720 aa9.44□□□□□ -0.9
CPSF7-226ENST00000626926 CGNQ9P2M7 1197 aaKnown RBP9.44□□□□□ -0.9
CPSF7-226ENST00000626926 SNX9Q9Y5X1 595 aa9.44□□□□□ -0.9
CPSF7-226ENST00000626926 PVALEFA0A1B0GWK0 134 aa9.43□□□□□ -0.9
CPSF7-226ENST00000626926 K7ESF4 209 aa9.43□□□□□ -0.9
CPSF7-226ENST00000626926 DPYSL4O14531 572 aa9.43□□□□□ -0.9
CPSF7-226ENST00000626926 PRPF40AO75400 957 aaKnown RBP9.43□□□□□ -0.9
CPSF7-226ENST00000626926 TACC1O75410 805 aa9.43□□□□□ -0.9
CPSF7-226ENST00000626926 F13A1P00488 732 aa9.43□□□□□ -0.9
CPSF7-226ENST00000626926 ZSCAN22P10073 491 aaPredicted RBP9.43□□□□□ -0.9
CPSF7-226ENST00000626926 PFKLP17858 780 aa9.43□□□□□ -0.9
CPSF7-226ENST00000626926 WARSP23381 471 aaKnown RBP9.43□□□□□ -0.9
CPSF7-226ENST00000626926 CYP2F1P24903 491 aa9.43□□□□□ -0.9
CPSF7-226ENST00000626926 SOX9P48436 509 aa9.43□□□□□ -0.9
CPSF7-226ENST00000626926 ASIC1P78348 528 aa9.43□□□□□ -0.9
CPSF7-226ENST00000626926 CLDN10P78369 228 aa9.43□□□□□ -0.9
CPSF7-226ENST00000626926 SATB1Q01826 763 aa9.43□□□□□ -0.9
CPSF7-226ENST00000626926 BFSP1Q12934 665 aa9.43□□□□□ -0.9
CPSF7-226ENST00000626926 USP4Q13107 963 aa9.43□□□□□ -0.9
CPSF7-226ENST00000626926 PSMD6Q15008 389 aa9.43□□□□□ -0.9
CPSF7-226ENST00000626926 SNRNP35Q16560 246 aaKnown RBP9.43□□□□□ -0.9
CPSF7-226ENST00000626926 CCDC142Q17RM4 750 aa9.43□□□□□ -0.9
CPSF7-226ENST00000626926 DUOXA2Q1HG44 320 aa9.43□□□□□ -0.9
CPSF7-226ENST00000626926 ITPRIPL2Q3MIP1 535 aa9.43□□□□□ -0.9
CPSF7-226ENST00000626926 TMEM196Q5HYL7 178 aa9.43□□□□□ -0.9
CPSF7-226ENST00000626926 RESP18Q5W5W9 173 aa9.43□□□□□ -0.9
CPSF7-226ENST00000626926 TSSK4Q6SA08 328 aa9.43□□□□□ -0.9
CPSF7-226ENST00000626926 VSTM1Q6UX27 236 aa9.43□□□□□ -0.9
CPSF7-226ENST00000626926 KIAA1958Q8N8K9 716 aa9.43□□□□□ -0.9
CPSF7-226ENST00000626926 RIN3Q8TB24 985 aa9.43□□□□□ -0.9
CPSF7-226ENST00000626926 GIPC2Q8TF65 315 aa9.43□□□□□ -0.9
CPSF7-226ENST00000626926 MRPS31Q92665 395 aaKnown RBP9.43□□□□□ -0.9
CPSF7-226ENST00000626926 HPS3Q969F9 1004 aa9.43□□□□□ -0.9
CPSF7-226ENST00000626926 DHX58Q96C10 678 aa9.43□□□□□ -0.9
CPSF7-226ENST00000626926 RMDN1Q96DB5 314 aa9.43□□□□□ -0.9
CPSF7-226ENST00000626926 HPDLQ96IR7 371 aa9.43□□□□□ -0.9
CPSF7-226ENST00000626926 ZFYVE19Q96K21 471 aa9.43□□□□□ -0.9
CPSF7-226ENST00000626926 SPATA17Q96L03 361 aa9.43□□□□□ -0.9
CPSF7-226ENST00000626926 PI4K2AQ9BTU6 479 aa9.43□□□□□ -0.9
CPSF7-226ENST00000626926 PCIF1Q9H4Z3 704 aa9.43□□□□□ -0.9
CPSF7-226ENST00000626926 VRTNQ9H8Y1 702 aa9.43□□□□□ -0.9
CPSF7-226ENST00000626926 HPS4Q9NQG7 708 aa9.43□□□□□ -0.9
CPSF7-226ENST00000626926 TDP1Q9NUW8 608 aa9.43□□□□□ -0.9
CPSF7-226ENST00000626926 THG1LQ9NWX6 298 aaKnown RBP9.43□□□□□ -0.9
CPSF7-226ENST00000626926 CDH9Q9ULB4 789 aa9.43□□□□□ -0.9
CPSF7-226ENST00000626926 CCL26Q9Y258 94 aa9.43□□□□□ -0.9
CPSF7-226ENST00000626926 SPTBN2O15020 2390 aa9.42□□□□□ -0.9
CPSF7-226ENST00000626926 CCDC163A0A0D9SF12 145 aa9.42□□□□□ -0.9
CPSF7-226ENST00000626926 OTOL1A6NHN0 477 aaPredicted RBP9.42□□□□□ -0.9
CPSF7-226ENST00000626926 TRDMT1O14717 391 aaKnown RBP9.42□□□□□ -0.9
CPSF7-226ENST00000626926 LRP3O75074 770 aa9.42□□□□□ -0.9
CPSF7-226ENST00000626926 TNNC2P02585 160 aa9.42□□□□□ -0.9
CPSF7-226ENST00000626926 KRT19P08727 400 aa9.42□□□□□ -0.9
CPSF7-226ENST00000626926 ACAT1P24752 427 aaKnown RBP9.42□□□□□ -0.9
CPSF7-226ENST00000626926 CNR2P34972 360 aa9.42□□□□□ -0.9
CPSF7-226ENST00000626926 AVPR1AP37288 418 aa9.42□□□□□ -0.9
CPSF7-226ENST00000626926 CXCL12P48061 93 aa9.42□□□□□ -0.9
CPSF7-226ENST00000626926 GPR15P49685 360 aa9.42□□□□□ -0.9
CPSF7-226ENST00000626926 KPNA1P52294 538 aaPredicted RBP9.42□□□□□ -0.9
CPSF7-226ENST00000626926 FAM160A1Q05DH4 1040 aa9.42□□□□□ -0.9
CPSF7-226ENST00000626926 TNK2Q07912 1038 aa9.42□□□□□ -0.9
CPSF7-226ENST00000626926 CYP24A1Q07973 514 aa9.42□□□□□ -0.9
CPSF7-226ENST00000626926 MAPRE1Q15691 268 aaKnown RBP9.42□□□□□ -0.9
CPSF7-226ENST00000626926 ZNF77Q15935 545 aa9.42□□□□□ -0.9
CPSF7-226ENST00000626926 TAF12Q16514 161 aa9.42□□□□□ -0.9
CPSF7-226ENST00000626926 LMBRD2Q68DH5 695 aaPredicted RBP9.42□□□□□ -0.9
CPSF7-226ENST00000626926 C4orf50Q6ZRC1 276 aa9.42□□□□□ -0.9
CPSF7-226ENST00000626926 Q6ZS52 159 aa9.42□□□□□ -0.9
CPSF7-226ENST00000626926 HS2ST1Q7LGA3 356 aa9.42□□□□□ -0.9
CPSF7-226ENST00000626926 TRAPPC11Q7Z392 1133 aa9.42□□□□□ -0.9
CPSF7-226ENST00000626926 MAB21L3Q8N8X9 362 aa9.42□□□□□ -0.9
CPSF7-226ENST00000626926 XXYLT1Q8NBI6 393 aa9.42□□□□□ -0.9
CPSF7-226ENST00000626926 CGRRF1Q99675 332 aa9.42□□□□□ -0.9
CPSF7-226ENST00000626926 SYT15Q9BQS2 421 aa9.42□□□□□ -0.9
CPSF7-226ENST00000626926 TTLL2Q9BWV7 592 aa9.42□□□□□ -0.9
CPSF7-226ENST00000626926 XYLT2Q9H1B5 865 aa9.42□□□□□ -0.9
CPSF7-226ENST00000626926 CRTAC1Q9NQ79 661 aa9.42□□□□□ -0.9
CPSF7-226ENST00000626926 FOXD4L1Q9NU39 408 aa9.42□□□□□ -0.9
CPSF7-226ENST00000626926 GCNT4Q9P109 453 aa9.42□□□□□ -0.9
CPSF7-226ENST00000626926 TFIP11Q9UBB9 837 aaKnown RBP9.42□□□□□ -0.9
CPSF7-226ENST00000626926 RCOR1Q9UKL0 485 aa9.42□□□□□ -0.9
CPSF7-226ENST00000626926 GTF3C4Q9UKN8 822 aa9.42□□□□□ -0.9
CPSF7-226ENST00000626926 PCDHA7Q9UN72 937 aa9.42□□□□□ -0.9
CPSF7-226ENST00000626926 NME7Q9Y5B8 376 aa9.42□□□□□ -0.9
CPSF7-226ENST00000626926 RALGAPA1Q6GYQ0 2036 aa9.42□□□□□ -0.9
CPSF7-226ENST00000626926 CHURC1-FNTBB4DL54 471 aa9.41□□□□□ -0.9
CPSF7-226ENST00000626926 POLR2DO15514 142 aaKnown RBP9.41□□□□□ -0.9
CPSF7-226ENST00000626926 HCRTO43612 131 aa9.41□□□□□ -0.9
CPSF7-226ENST00000626926 ACTN4O43707 911 aaKnown RBP9.41□□□□□ -0.9
CPSF7-226ENST00000626926 OLFM2O95897 454 aa9.41□□□□□ -0.9
CPSF7-226ENST00000626926 LMO2P25791 158 aa9.41□□□□□ -0.9
CPSF7-226ENST00000626926 NOP14P78316 857 aaKnown RBP9.41□□□□□ -0.9
CPSF7-226ENST00000626926 RUNX3Q13761 415 aa9.41□□□□□ -0.9
CPSF7-226ENST00000626926 PUM1Q14671 1186 aaKnown RBP eCLIP9.41□□□□□ -0.9
CPSF7-226ENST00000626926 MTF1Q14872 753 aa9.41□□□□□ -0.9
CPSF7-226ENST00000626926 PDGFRLQ15198 375 aa9.41□□□□□ -0.9
CPSF7-226ENST00000626926 DDR2Q16832 855 aa9.41□□□□□ -0.9
CPSF7-226ENST00000626926 TXNDC8Q6A555 127 aa9.41□□□□□ -0.9
CPSF7-226ENST00000626926 LAIR1Q6GTX8 287 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms