RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 NOMO2Q5JPE7 1267 aa11.57□□□□□ -0.56
VPS8-227ENST00000625842 SERPINA13PQ6UXR4 307 aa11.57□□□□□ -0.56
VPS8-227ENST00000625842 RASSF3Q86WH2 238 aa11.57□□□□□ -0.56
VPS8-227ENST00000625842 CAMKK2Q96RR4 588 aa11.57□□□□□ -0.56
VPS8-227ENST00000625842 PDCD2LQ9BRP1 358 aa11.57□□□□□ -0.56
VPS8-227ENST00000625842 ARHGAP9Q9BRR9 750 aa11.57□□□□□ -0.56
VPS8-227ENST00000625842 CCSER1Q9C0I3 900 aa11.57□□□□□ -0.56
VPS8-227ENST00000625842 RUBCNLQ9H714 662 aa11.57□□□□□ -0.56
VPS8-227ENST00000625842 NR2E1Q9Y466 385 aa11.57□□□□□ -0.56
VPS8-227ENST00000625842 ZNF536O15090 1300 aa11.57□□□□□ -0.56
VPS8-227ENST00000625842 HS6ST1O60243 411 aa11.57□□□□□ -0.56
VPS8-227ENST00000625842 GUCY1B2O75343 617 aa11.57□□□□□ -0.56
VPS8-227ENST00000625842 PTPRAP18433 802 aa11.57□□□□□ -0.56
VPS8-227ENST00000625842 IZUMO3Q5VZ72 239 aa11.57□□□□□ -0.56
VPS8-227ENST00000625842 RD3Q7Z3Z2 195 aa11.57□□□□□ -0.56
VPS8-227ENST00000625842 SPATS2Q86XZ4 545 aaKnown RBP11.57□□□□□ -0.56
VPS8-227ENST00000625842 LZTR1Q8N653 840 aa11.57□□□□□ -0.56
VPS8-227ENST00000625842 SMG7Q92540 1137 aaKnown RBP11.57□□□□□ -0.56
VPS8-227ENST00000625842 NRBF2Q96F24 287 aa11.57□□□□□ -0.56
VPS8-227ENST00000625842 WDR18Q9BV38 432 aa11.57□□□□□ -0.56
VPS8-227ENST00000625842 C2orf49Q9BVC5 232 aaPredicted RBP11.57□□□□□ -0.56
VPS8-227ENST00000625842 JMJD4Q9H9V9 463 aa11.57□□□□□ -0.56
VPS8-227ENST00000625842 AAR2Q9Y312 384 aaKnown RBP11.57□□□□□ -0.56
VPS8-227ENST00000625842 CLASP2O75122 1294 aaKnown RBP11.56□□□□□ -0.56
VPS8-227ENST00000625842 ITGB3P05106 788 aa11.56□□□□□ -0.56
VPS8-227ENST00000625842 HSPA1AP0DMV8 641 aaKnown RBP11.56□□□□□ -0.56
VPS8-227ENST00000625842 HSPA1BP0DMV9 641 aaKnown RBP11.56□□□□□ -0.56
VPS8-227ENST00000625842 GPD1P21695 349 aa11.56□□□□□ -0.56
VPS8-227ENST00000625842 EIF4A3P38919 411 aaKnown RBP11.56□□□□□ -0.56
VPS8-227ENST00000625842 RGS7P49802 495 aa11.56□□□□□ -0.56
VPS8-227ENST00000625842 PLTPP55058 493 aa11.56□□□□□ -0.56
VPS8-227ENST00000625842 USP4Q13107 963 aa11.56□□□□□ -0.56
VPS8-227ENST00000625842 NLRP9Q7RTR0 991 aa11.56□□□□□ -0.56
VPS8-227ENST00000625842 PTPRN2Q92932 1015 aa11.56□□□□□ -0.56
VPS8-227ENST00000625842 SYT15Q9BQS2 421 aa11.56□□□□□ -0.56
VPS8-227ENST00000625842 TARS2Q9BW92 718 aaKnown RBP11.56□□□□□ -0.56
VPS8-227ENST00000625842 FAM49BQ9NUQ9 324 aa11.56□□□□□ -0.56
VPS8-227ENST00000625842 MAD2L2Q9UI95 211 aa11.56□□□□□ -0.56
VPS8-227ENST00000625842 TRAF3IP3Q9Y228 551 aa11.56□□□□□ -0.56
VPS8-227ENST00000625842 USP20Q9Y2K6 914 aa11.56□□□□□ -0.56
VPS8-227ENST00000625842 SALL1Q9NSC2 1324 aa11.56□□□□□ -0.56
VPS8-227ENST00000625842 KRT14P02533 472 aa11.56□□□□□ -0.56
VPS8-227ENST00000625842 DR1Q01658 176 aa11.56□□□□□ -0.56
VPS8-227ENST00000625842 PFKPQ01813 784 aa11.56□□□□□ -0.56
VPS8-227ENST00000625842 CXCL17Q6UXB2 119 aa11.56□□□□□ -0.56
VPS8-227ENST00000625842 SAMD11Q96NU1 681 aa11.56□□□□□ -0.56
VPS8-227ENST00000625842 NEK6Q9HC98 313 aa11.56□□□□□ -0.56
VPS8-227ENST00000625842 DMAP1Q9NPF5 467 aaPredicted RBP11.56□□□□□ -0.56
VPS8-227ENST00000625842 STARD13Q9Y3M8 1113 aa11.56□□□□□ -0.56
VPS8-227ENST00000625842 GLI2P10070 1586 aa11.56□□□□□ -0.56
VPS8-227ENST00000625842 CNTNAP2Q9UHC6 1331 aa11.56□□□□□ -0.56
VPS8-227ENST00000625842 SOAT2O75908 522 aa11.56□□□□□ -0.56
VPS8-227ENST00000625842 CHRM3P20309 590 aa11.56□□□□□ -0.56
VPS8-227ENST00000625842 C11orf57Q6ZUT1 292 aaPredicted RBP11.56□□□□□ -0.56
VPS8-227ENST00000625842 KDELC2Q7Z4H8 507 aa11.56□□□□□ -0.56
VPS8-227ENST00000625842 TRIM59Q8IWR1 403 aa11.56□□□□□ -0.56
VPS8-227ENST00000625842 RPS6KB2Q9UBS0 482 aa11.56□□□□□ -0.56
VPS8-227ENST00000625842 ABCA9Q8IUA7 1624 aa11.56□□□□□ -0.56
VPS8-227ENST00000625842 KPNA3O00505 521 aaPredicted RBP11.56□□□□□ -0.56
VPS8-227ENST00000625842 CASP14P31944 242 aa11.56□□□□□ -0.56
VPS8-227ENST00000625842 GUCY2FP51841 1108 aa11.56□□□□□ -0.56
VPS8-227ENST00000625842 MB21D2Q8IYB1 491 aaPredicted RBP11.56□□□□□ -0.56
VPS8-227ENST00000625842 CCNYL1Q8N7R7 359 aa11.56□□□□□ -0.56
VPS8-227ENST00000625842 ACER1Q8TDN7 264 aa11.56□□□□□ -0.56
VPS8-227ENST00000625842 CLPBQ9H078 707 aa11.56□□□□□ -0.56
VPS8-227ENST00000625842 RIC8BQ9NVN3 520 aa11.56□□□□□ -0.56
VPS8-227ENST00000625842 MAN1B1Q9UKM7 699 aa11.56□□□□□ -0.56
VPS8-227ENST00000625842 LRRC14BA6NHZ5 514 aa11.55□□□□□ -0.56
VPS8-227ENST00000625842 UQCRBP14927 111 aa11.55□□□□□ -0.56
VPS8-227ENST00000625842 MSH3P20585 1137 aa11.55□□□□□ -0.56
VPS8-227ENST00000625842 MAPK1P28482 360 aa11.55□□□□□ -0.56
VPS8-227ENST00000625842 CCR1P32246 355 aa11.55□□□□□ -0.56
VPS8-227ENST00000625842 RANBP1P43487 201 aa11.55□□□□□ -0.56
VPS8-227ENST00000625842 ITGA9Q13797 1035 aa11.55□□□□□ -0.56
VPS8-227ENST00000625842 OTOP3Q7RTS5 596 aa11.55□□□□□ -0.56
VPS8-227ENST00000625842 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.55□□□□□ -0.562e-7■■■■■ 64.2
VPS8-227ENST00000625842 MRPL48Q96GC5 212 aaKnown RBP11.55□□□□□ -0.56
VPS8-227ENST00000625842 SMARCD1Q96GM5 515 aa11.55□□□□□ -0.56
VPS8-227ENST00000625842 PLEKHA8Q96JA3 519 aa11.55□□□□□ -0.56
VPS8-227ENST00000625842 NHEJ1Q9H9Q4 299 aaPredicted RBP11.55□□□□□ -0.56
VPS8-227ENST00000625842 THEGQ9P2T0 379 aa11.55□□□□□ -0.56
VPS8-227ENST00000625842 LIMA1Q9UHB6 759 aaKnown RBP11.55□□□□□ -0.56
VPS8-227ENST00000625842 ADAMTS1Q9UHI8 967 aa11.55□□□□□ -0.56
VPS8-227ENST00000625842 DLC1Q96QB1 1528 aa11.55□□□□□ -0.56
VPS8-227ENST00000625842 ATP9BO43861 1147 aa11.55□□□□□ -0.56
VPS8-227ENST00000625842 HLA-DRAP01903 254 aa11.55□□□□□ -0.56
VPS8-227ENST00000625842 TYK2P29597 1187 aa11.55□□□□□ -0.56
VPS8-227ENST00000625842 GTF2H1P32780 548 aa11.55□□□□□ -0.56
VPS8-227ENST00000625842 RPIAP49247 311 aa11.55□□□□□ -0.56
VPS8-227ENST00000625842 ALG11Q2TAA5 492 aa11.55□□□□□ -0.56
VPS8-227ENST00000625842 GJC2Q5T442 439 aaPredicted RBP11.55□□□□□ -0.56
VPS8-227ENST00000625842 ATP11CQ8NB49 1132 aa11.55□□□□□ -0.56
VPS8-227ENST00000625842 LENG9Q96B70 501 aa11.55□□□□□ -0.56
VPS8-227ENST00000625842 NAF1Q96HR8 494 aaKnown RBP11.55□□□□□ -0.56
VPS8-227ENST00000625842 QSOX1O00391 747 aa11.55□□□□□ -0.56
VPS8-227ENST00000625842 RTN2O75298 545 aa11.55□□□□□ -0.56
VPS8-227ENST00000625842 LRRC32Q14392 662 aa11.55□□□□□ -0.56
VPS8-227ENST00000625842 EDRF1Q3B7T1 1238 aa11.55□□□□□ -0.56
VPS8-227ENST00000625842 HABP4Q5JVS0 413 aaKnown RBP11.55□□□□□ -0.56
VPS8-227ENST00000625842 SPRYD7Q5W111 196 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms