RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 WDFY3Q8IZQ1 3526 aa15.83■□□□□ 0.12
PNKP-218ENST00000625299 KRT18P05783 430 aaKnown RBP15.82■□□□□ 0.12
PNKP-218ENST00000625299 BCKDHBP21953 392 aa15.82■□□□□ 0.12
PNKP-218ENST00000625299 DHPSP49366 369 aaPredicted RBP15.82■□□□□ 0.12
PNKP-218ENST00000625299 FAM160A1Q05DH4 1040 aa15.82■□□□□ 0.12
PNKP-218ENST00000625299 ZNF268Q14587 947 aaPredicted RBP15.82■□□□□ 0.12
PNKP-218ENST00000625299 ZNF77Q15935 545 aa15.82■□□□□ 0.12
PNKP-218ENST00000625299 DDR2Q16832 855 aa15.82■□□□□ 0.12
PNKP-218ENST00000625299 SV2CQ496J9 727 aa15.82■□□□□ 0.12
PNKP-218ENST00000625299 C2orf27AQ580R0 203 aa15.82■□□□□ 0.12
PNKP-218ENST00000625299 ADALQ6DHV7 355 aa15.82■□□□□ 0.12
PNKP-218ENST00000625299 MCTP1Q6DN14 999 aa15.82■□□□□ 0.12
PNKP-218ENST00000625299 DEFB124Q8NES8 71 aa15.82■□□□□ 0.12
PNKP-218ENST00000625299 PIGKQ92643 395 aa15.82■□□□□ 0.12
PNKP-218ENST00000625299 CYP2S1Q96SQ9 504 aa15.82■□□□□ 0.12
PNKP-218ENST00000625299 SCNM1Q9BWG6 230 aa15.82■□□□□ 0.12
PNKP-218ENST00000625299 ODF2LQ9ULJ1 636 aa15.82■□□□□ 0.12
PNKP-218ENST00000625299 TRAV19A0A0A6YYK7 116 aa15.81■□□□□ 0.12
PNKP-218ENST00000625299 KPNA7A9QM74 516 aa15.81■□□□□ 0.12
PNKP-218ENST00000625299 TISP43B9A030 160 aa15.81■□□□□ 0.12
PNKP-218ENST00000625299 TRAK2O60296 914 aa15.81■□□□□ 0.12
PNKP-218ENST00000625299 TADA3O75528 432 aa15.81■□□□□ 0.12
PNKP-218ENST00000625299 USP17L7P0C7H9 530 aa15.81■□□□□ 0.12
PNKP-218ENST00000625299 CEACAM1P13688 526 aa15.81■□□□□ 0.12
PNKP-218ENST00000625299 EML3Q32P44 896 aa15.81■□□□□ 0.12
PNKP-218ENST00000625299 TMEM119Q4V9L6 283 aa15.81■□□□□ 0.12
PNKP-218ENST00000625299 C11orf74Q86VG3 221 aa15.81■□□□□ 0.12
PNKP-218ENST00000625299 ZCCHC14Q8WYQ9 949 aaKnown RBP15.81■□□□□ 0.12
PNKP-218ENST00000625299 SLC22A12Q96S37 553 aa15.81■□□□□ 0.12
PNKP-218ENST00000625299 ASB7Q9H672 318 aa15.81■□□□□ 0.12
PNKP-218ENST00000625299 PARVGQ9HBI0 331 aa15.81■□□□□ 0.12
PNKP-218ENST00000625299 UXTQ9UBK9 157 aaPredicted RBP15.81■□□□□ 0.12
PNKP-218ENST00000625299 WASF3Q9UPY6 502 aa15.81■□□□□ 0.12
PNKP-218ENST00000625299 C2CD2Q9Y426 696 aa15.81■□□□□ 0.12
PNKP-218ENST00000625299 TMEM8BA6NDV4 472 aa15.8■□□□□ 0.12
PNKP-218ENST00000625299 ANKRD63C9JTQ0 380 aa15.8■□□□□ 0.12
PNKP-218ENST00000625299 CDX4O14627 284 aaPredicted RBP15.8■□□□□ 0.12
PNKP-218ENST00000625299 CSRP1P21291 193 aaKnown RBP15.8■□□□□ 0.12
PNKP-218ENST00000625299 ACAT1P24752 427 aaKnown RBP15.8■□□□□ 0.12
PNKP-218ENST00000625299 CYP2F1P24903 491 aa15.8■□□□□ 0.12
PNKP-218ENST00000625299 MAPK8P45983 427 aa15.8■□□□□ 0.12
PNKP-218ENST00000625299 RPL10AP62906 217 aaKnown RBP15.8■□□□□ 0.12
PNKP-218ENST00000625299 IRX4P78413 519 aa15.8■□□□□ 0.12
PNKP-218ENST00000625299 ATP2C1P98194 919 aaPredicted RBP15.8■□□□□ 0.12
PNKP-218ENST00000625299 USP4Q13107 963 aa15.8■□□□□ 0.12
PNKP-218ENST00000625299 NR1H3Q13133 447 aa15.8■□□□□ 0.12
PNKP-218ENST00000625299 NFE2Q16621 373 aaPredicted RBP15.8■□□□□ 0.12
PNKP-218ENST00000625299 ARMCX6Q7L4S7 300 aa15.8■□□□□ 0.12
PNKP-218ENST00000625299 EFCAB13Q8IY85 973 aa15.8■□□□□ 0.12
PNKP-218ENST00000625299 CCDC33Q8N5R6 958 aa15.8■□□□□ 0.12
PNKP-218ENST00000625299 KCTD17Q8N5Z5 321 aa15.8■□□□□ 0.12
PNKP-218ENST00000625299 SH3RF2Q8TEC5 729 aa15.8■□□□□ 0.12
PNKP-218ENST00000625299 ZNF560Q96MR9 790 aa15.8■□□□□ 0.12
PNKP-218ENST00000625299 TMEM121BQ9BXQ6 578 aaPredicted RBP15.8■□□□□ 0.12
PNKP-218ENST00000625299 AGO2Q9UKV8 859 aaKnown RBP15.8■□□□□ 0.12
PNKP-218ENST00000625299 AKAP13Q12802 2813 aa15.8■□□□□ 0.12
PNKP-218ENST00000625299 ASCC3Q8N3C0 2202 aaKnown RBP15.79■□□□□ 0.12
PNKP-218ENST00000625299 ANAPC1Q9H1A4 1944 aa15.79■□□□□ 0.12
PNKP-218ENST00000625299 ANTXRLA6NF34 631 aa15.79■□□□□ 0.12
PNKP-218ENST00000625299 SRRM3A6NNA2 597 aaPredicted RBP15.79■□□□□ 0.12
PNKP-218ENST00000625299 SOBPA7XYQ1 873 aa15.79■□□□□ 0.12
PNKP-218ENST00000625299 TBCAO75347 108 aaKnown RBP15.79■□□□□ 0.12
PNKP-218ENST00000625299 NOL4O94818 638 aa15.79■□□□□ 0.12
PNKP-218ENST00000625299 KCNB1Q14721 858 aa15.79■□□□□ 0.12
PNKP-218ENST00000625299 ZC2HC1CQ53FD0 456 aaPredicted RBP15.79■□□□□ 0.12
PNKP-218ENST00000625299 SCN4BQ8IWT1 228 aa15.79■□□□□ 0.12
PNKP-218ENST00000625299 PDCL2Q8N4E4 241 aa15.79■□□□□ 0.12
PNKP-218ENST00000625299 ARL14EPQ8N8R7 260 aaPredicted RBP15.79■□□□□ 0.12
PNKP-218ENST00000625299 MDGA1Q8NFP4 955 aa15.79■□□□□ 0.12
PNKP-218ENST00000625299 RASSF8Q8NHQ8 419 aa15.79■□□□□ 0.12
PNKP-218ENST00000625299 USP33Q8TEY7 942 aa15.79■□□□□ 0.12
PNKP-218ENST00000625299 GATA6Q92908 595 aa15.79■□□□□ 0.12
PNKP-218ENST00000625299 KCNN1Q92952 543 aa15.79■□□□□ 0.12
PNKP-218ENST00000625299 CNOT6LQ96LI5 555 aaKnown RBP15.79■□□□□ 0.12
PNKP-218ENST00000625299 CCSER1Q9C0I3 900 aa15.79■□□□□ 0.12
PNKP-218ENST00000625299 LINC00597Q9H2U6 94 aa15.79■□□□□ 0.12
PNKP-218ENST00000625299 TMEM206Q9H813 350 aa15.79■□□□□ 0.12
PNKP-218ENST00000625299 DDX43Q9NXZ2 648 aaKnown RBP15.79■□□□□ 0.12
PNKP-218ENST00000625299 HELZP42694 1942 aaKnown RBP15.78■□□□□ 0.12
PNKP-218ENST00000625299 C2orf78A6NCI8 922 aa15.78■□□□□ 0.12
PNKP-218ENST00000625299 HYAL3O43820 417 aaPredicted RBP15.78■□□□□ 0.12
PNKP-218ENST00000625299 NFATC1O95644 943 aa15.78■□□□□ 0.12
PNKP-218ENST00000625299 SCP2P22307 547 aa15.78■□□□□ 0.12
PNKP-218ENST00000625299 MCM6Q14566 821 aa15.78■□□□□ 0.12
PNKP-218ENST00000625299 ACAP1Q15027 740 aa15.78■□□□□ 0.12
PNKP-218ENST00000625299 CCDC142Q17RM4 750 aa15.78■□□□□ 0.12
PNKP-218ENST00000625299 RILPL1Q5EBL4 403 aa15.78■□□□□ 0.12
PNKP-218ENST00000625299 TRIM61Q5EBN2 209 aa15.78■□□□□ 0.12
PNKP-218ENST00000625299 RASSF3Q86WH2 238 aa15.78■□□□□ 0.12
PNKP-218ENST00000625299 FSIP1Q8NA03 581 aa15.78■□□□□ 0.12
PNKP-218ENST00000625299 CCDC26Q8TAB7 109 aa15.78■□□□□ 0.12
PNKP-218ENST00000625299 RLN3Q8WXF3 142 aa15.78■□□□□ 0.12
PNKP-218ENST00000625299 CALML4Q96GE6 196 aa15.78■□□□□ 0.12
PNKP-218ENST00000625299 IKZF4Q9H2S9 585 aa15.78■□□□□ 0.12
PNKP-218ENST00000625299 GTF3C4Q9UKN8 822 aa15.78■□□□□ 0.12
PNKP-218ENST00000625299 L1RE1Q9UN81 338 aa15.78■□□□□ 0.12
PNKP-218ENST00000625299 PKD1L2Q7Z442 2459 aa15.78■□□□□ 0.12
PNKP-218ENST00000625299 ATXN2Q99700 1313 aaKnown RBP15.77■□□□□ 0.12
PNKP-218ENST00000625299 PTPRDP23468 1912 aa15.77■□□□□ 0.12
PNKP-218ENST00000625299 K7EQS6 105 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms