RNA–Protein interactions for RNA: ENST00000622972.3

LINC00963-215, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 444 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-215ENST00000622972 NCAPHQ15003 741 aa6.33□□□□□ -1.4
LINC00963-215ENST00000622972 MLF2Q15773 248 aaPredicted RBP6.33□□□□□ -1.4
LINC00963-215ENST00000622972 KNOP1Q1ED39 458 aaKnown RBP6.33□□□□□ -1.4
LINC00963-215ENST00000622972 KLHL40Q2TBA0 621 aa6.33□□□□□ -1.4
LINC00963-215ENST00000622972 CYP4A22Q5TCH4 519 aa6.33□□□□□ -1.4
LINC00963-215ENST00000622972 JADE1Q6IE81 842 aa6.33□□□□□ -1.4
LINC00963-215ENST00000622972 PHLDB3Q6NSJ2 640 aa6.33□□□□□ -1.4
LINC00963-215ENST00000622972 RSPO2Q6UXX9 243 aaPredicted RBP6.33□□□□□ -1.4
LINC00963-215ENST00000622972 PDZD4Q76G19 769 aaPredicted RBP6.33□□□□□ -1.4
LINC00963-215ENST00000622972 RTL10Q7L3V2 364 aa6.33□□□□□ -1.4
LINC00963-215ENST00000622972 BRSK2Q8IWQ3 736 aa6.33□□□□□ -1.4
LINC00963-215ENST00000622972 C12orf56Q8IXR9 622 aa6.33□□□□□ -1.4
LINC00963-215ENST00000622972 OR5B17Q8NGF7 314 aa6.33□□□□□ -1.4
LINC00963-215ENST00000622972 ZNF461Q8TAF7 563 aa6.33□□□□□ -1.4
LINC00963-215ENST00000622972 TMEM174Q8WUU8 243 aa6.33□□□□□ -1.4
LINC00963-215ENST00000622972 ZNF512Q96ME7 567 aaPredicted RBP6.33□□□□□ -1.4
LINC00963-215ENST00000622972 ARID3AQ99856 593 aa6.33□□□□□ -1.4
LINC00963-215ENST00000622972 FAM213AQ9BRX8 229 aa6.33□□□□□ -1.4
LINC00963-215ENST00000622972 MSTO1Q9BUK6 570 aa6.33□□□□□ -1.4
LINC00963-215ENST00000622972 RPP25Q9BUL9 199 aaKnown RBP6.33□□□□□ -1.4
LINC00963-215ENST00000622972 BCO2Q9BYV7 579 aa6.33□□□□□ -1.4
LINC00963-215ENST00000622972 FOXQ1Q9C009 403 aa6.33□□□□□ -1.4
LINC00963-215ENST00000622972 SLITRK6Q9H5Y7 841 aa6.33□□□□□ -1.4
LINC00963-215ENST00000622972 RPF1Q9H9Y2 349 aaKnown RBP6.33□□□□□ -1.4
LINC00963-215ENST00000622972 SLC2A4RGQ9NR83 387 aa6.33□□□□□ -1.4
LINC00963-215ENST00000622972 SPATA6Q9NWH7 488 aaPredicted RBP6.33□□□□□ -1.4
LINC00963-215ENST00000622972 CNTN3Q9P232 1028 aa6.33□□□□□ -1.4
LINC00963-215ENST00000622972 FBXL5Q9UKA1 691 aa6.33□□□□□ -1.4
LINC00963-215ENST00000622972 AGO2Q9UKV8 859 aaKnown RBP6.33□□□□□ -1.4
LINC00963-215ENST00000622972 CTNND2Q9UQB3 1225 aa6.33□□□□□ -1.4
LINC00963-215ENST00000622972 TRAF3IP3Q9Y228 551 aa6.33□□□□□ -1.4
LINC00963-215ENST00000622972 NME7Q9Y5B8 376 aa6.33□□□□□ -1.4
LINC00963-215ENST00000622972 R4GN57 208 aa6.33□□□□□ -1.4
LINC00963-215ENST00000622972 ZDBF2Q9HCK1 2354 aa6.33□□□□□ -1.4
LINC00963-215ENST00000622972 DOCK8Q8NF50 2099 aa6.33□□□□□ -1.4
LINC00963-215ENST00000622972 ZNF638Q14966 1978 aaKnown RBP6.33□□□□□ -1.4
LINC00963-215ENST00000622972 KANSL1LA0AUZ9 987 aa6.32□□□□□ -1.4
LINC00963-215ENST00000622972 WDR27A2RRH5 827 aa6.32□□□□□ -1.4
LINC00963-215ENST00000622972 FAM170BA6NMN3 283 aa6.32□□□□□ -1.4
LINC00963-215ENST00000622972 LRRIQ3A6PVS8 624 aaPredicted RBP6.32□□□□□ -1.4
LINC00963-215ENST00000622972 PROB1E7EW31 1015 aa6.32□□□□□ -1.4
LINC00963-215ENST00000622972 PDXKO00764 312 aa6.32□□□□□ -1.4
LINC00963-215ENST00000622972 NCAM2O15394 837 aa6.32□□□□□ -1.4
LINC00963-215ENST00000622972 LAMTOR5O43504 91 aa6.32□□□□□ -1.4
LINC00963-215ENST00000622972 MBD3O95983 291 aa6.32□□□□□ -1.4
LINC00963-215ENST00000622972 CLTAP09496 248 aa6.32□□□□□ -1.4
LINC00963-215ENST00000622972 TRIM49P0CI25 452 aa6.32□□□□□ -1.4
LINC00963-215ENST00000622972 TRIM49CP0CI26 452 aa6.32□□□□□ -1.4
LINC00963-215ENST00000622972 ATF2P15336 505 aa6.32□□□□□ -1.4
LINC00963-215ENST00000622972 CEBPBP17676 345 aa6.32□□□□□ -1.4
LINC00963-215ENST00000622972 CD72P21854 359 aa6.32□□□□□ -1.4
LINC00963-215ENST00000622972 GARTP22102 1010 aa6.32□□□□□ -1.4
LINC00963-215ENST00000622972 SCTRP47872 440 aa6.32□□□□□ -1.4
LINC00963-215ENST00000622972 YWHAHQ04917 246 aaPredicted RBP6.32□□□□□ -1.4
LINC00963-215ENST00000622972 CYP24A1Q07973 514 aa6.32□□□□□ -1.4
LINC00963-215ENST00000622972 TWF1Q12792 350 aa6.32□□□□□ -1.4
LINC00963-215ENST00000622972 ALCAMQ13740 583 aa6.32□□□□□ -1.4
LINC00963-215ENST00000622972 KYAT1Q16773 422 aa6.32□□□□□ -1.4
LINC00963-215ENST00000622972 SLC44A4Q53GD3 710 aa6.32□□□□□ -1.4
LINC00963-215ENST00000622972 CCDC183Q5T5S1 534 aa6.32□□□□□ -1.4
LINC00963-215ENST00000622972 TPGS2Q68CL5 300 aa6.32□□□□□ -1.4
LINC00963-215ENST00000622972 KLHL10Q6JEL2 608 aa6.32□□□□□ -1.4
LINC00963-215ENST00000622972 ARMCX5Q6P1M9 558 aa6.32□□□□□ -1.4
LINC00963-215ENST00000622972 ZC3H14Q6PJT7 736 aaKnown RBP6.32□□□□□ -1.4
LINC00963-215ENST00000622972 TPRG1Q6ZUI0 275 aa6.32□□□□□ -1.4
LINC00963-215ENST00000622972 Q6ZVU0 165 aa6.32□□□□□ -1.4
LINC00963-215ENST00000622972 CYP2U1Q7Z449 544 aa6.32□□□□□ -1.4
LINC00963-215ENST00000622972 SLC9A9Q8IVB4 645 aa6.32□□□□□ -1.4
LINC00963-215ENST00000622972 NPAS3Q8IXF0 933 aa6.32□□□□□ -1.4
LINC00963-215ENST00000622972 BEST2Q8NFU1 509 aa6.32□□□□□ -1.4
LINC00963-215ENST00000622972 PJA1Q8NG27 643 aa6.32□□□□□ -1.4
LINC00963-215ENST00000622972 FAM200AQ8TCP9 573 aa6.32□□□□□ -1.4
LINC00963-215ENST00000622972 NOC3LQ8WTT2 800 aaKnown RBP6.32□□□□□ -1.4
LINC00963-215ENST00000622972 NELFBQ8WX92 580 aa6.32□□□□□ -1.4
LINC00963-215ENST00000622972 POMGNT1Q8WZA1 660 aa6.32□□□□□ -1.4
LINC00963-215ENST00000622972 SUSD3Q96L08 255 aa6.32□□□□□ -1.4
LINC00963-215ENST00000622972 LRRC27Q9C0I9 530 aa6.32□□□□□ -1.4
LINC00963-215ENST00000622972 BRD9Q9H8M2 597 aa6.32□□□□□ -1.4
LINC00963-215ENST00000622972 PLEKHA5Q9HAU0 1116 aa6.32□□□□□ -1.4
LINC00963-215ENST00000622972 ZFP14Q9HCL3 533 aa6.32□□□□□ -1.4
LINC00963-215ENST00000622972 PDE11AQ9HCR9 933 aa6.32□□□□□ -1.4
LINC00963-215ENST00000622972 ASAH2Q9NR71 780 aa6.32□□□□□ -1.4
LINC00963-215ENST00000622972 GDE1Q9NZC3 331 aa6.32□□□□□ -1.4
LINC00963-215ENST00000622972 SIX4Q9UIU6 781 aa6.32□□□□□ -1.4
LINC00963-215ENST00000622972 UBQLN1Q9UMX0 589 aaKnown RBP6.32□□□□□ -1.4
LINC00963-215ENST00000622972 MRPS17Q9Y2R5 130 aaKnown RBP6.32□□□□□ -1.4
LINC00963-215ENST00000622972 TIMM13Q9Y5L4 95 aaPredicted RBP6.32□□□□□ -1.4
LINC00963-215ENST00000622972 INSL5Q9Y5Q6 135 aa6.32□□□□□ -1.4
LINC00963-215ENST00000622972 MIA3Q5JRA6 1907 aa6.31□□□□□ -1.4
LINC00963-215ENST00000622972 MYO16Q9Y6X6 1858 aa6.31□□□□□ -1.4
LINC00963-215ENST00000622972 ARHGEF37A1IGU5 675 aa6.31□□□□□ -1.4
LINC00963-215ENST00000622972 SYCE3A1L190 88 aa6.31□□□□□ -1.4
LINC00963-215ENST00000622972 HCRTO43612 131 aa6.31□□□□□ -1.4
LINC00963-215ENST00000622972 EXTL3O43909 919 aa6.31□□□□□ -1.4
LINC00963-215ENST00000622972 ABLIM3O94929 683 aa6.31□□□□□ -1.4
LINC00963-215ENST00000622972 SMC2O95347 1197 aa6.31□□□□□ -1.4
LINC00963-215ENST00000622972 PAPLNO95428 1278 aa6.31□□□□□ -1.4
LINC00963-215ENST00000622972 SEC24AO95486 1093 aa6.31□□□□□ -1.4
LINC00963-215ENST00000622972 VNN1O95497 513 aa6.31□□□□□ -1.4
LINC00963-215ENST00000622972 LMNAP02545 664 aaKnown RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms