RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 SDHAF4Q5VUM1 108 aa14.9□□□□□ -0.02
PCDHGC3-208ENST00000622836 PARM1Q6UWI2 310 aa14.9□□□□□ -0.02
PCDHGC3-208ENST00000622836 MLKLQ8NB16 471 aa14.9□□□□□ -0.02
PCDHGC3-208ENST00000622836 B3GALNT2Q8NCR0 500 aa14.9□□□□□ -0.02
PCDHGC3-208ENST00000622836 FGF14Q92915 247 aa14.9□□□□□ -0.02
PCDHGC3-208ENST00000622836 PCED1BQ96HM7 432 aa14.9□□□□□ -0.02
PCDHGC3-208ENST00000622836 TNIP3Q96KP6 325 aa14.9□□□□□ -0.02
PCDHGC3-208ENST00000622836 MED10Q9BTT4 135 aa14.9□□□□□ -0.02
PCDHGC3-208ENST00000622836 SRRTQ9BXP5 876 aaKnown RBP14.9□□□□□ -0.02
PCDHGC3-208ENST00000622836 DNAI2Q9GZS0 605 aa14.9□□□□□ -0.02
PCDHGC3-208ENST00000622836 NIF3L1Q9GZT8 377 aa14.9□□□□□ -0.02
PCDHGC3-208ENST00000622836 SMOC2Q9H3U7 446 aa14.9□□□□□ -0.02
PCDHGC3-208ENST00000622836 RAB20Q9NX57 234 aa14.9□□□□□ -0.02
PCDHGC3-208ENST00000622836 NOTCH4Q99466 2003 aa14.9□□□□□ -0.02
PCDHGC3-208ENST00000622836 TMEM221A6NGB7 291 aa14.89□□□□□ -0.03
PCDHGC3-208ENST00000622836 ANHXE9PGG2 379 aa14.89□□□□□ -0.03
PCDHGC3-208ENST00000622836 M0R296 226 aa14.89□□□□□ -0.03
PCDHGC3-208ENST00000622836 GNA14O95837 355 aa14.89□□□□□ -0.03
PCDHGC3-208ENST00000622836 CD58P19256 250 aa14.89□□□□□ -0.03
PCDHGC3-208ENST00000622836 CDC25CP30307 473 aa14.89□□□□□ -0.03
PCDHGC3-208ENST00000622836 MAGEA11P43364 429 aa14.89□□□□□ -0.03
PCDHGC3-208ENST00000622836 ASPAP45381 313 aa14.89□□□□□ -0.03
PCDHGC3-208ENST00000622836 NDST1P52848 882 aa14.89□□□□□ -0.03
PCDHGC3-208ENST00000622836 CETN1Q12798 172 aa14.89□□□□□ -0.03
PCDHGC3-208ENST00000622836 TPD52L1Q16890 204 aaPredicted RBP14.89□□□□□ -0.03
PCDHGC3-208ENST00000622836 CBWD6Q4V339 395 aa14.89□□□□□ -0.03
PCDHGC3-208ENST00000622836 CBWD3Q5JTY5 395 aa14.89□□□□□ -0.03
PCDHGC3-208ENST00000622836 CBWD5Q5RIA9 395 aa14.89□□□□□ -0.03
PCDHGC3-208ENST00000622836 FOXR2Q6PJQ5 311 aa14.89□□□□□ -0.03
PCDHGC3-208ENST00000622836 TMC8Q8IU68 726 aa14.89□□□□□ -0.03
PCDHGC3-208ENST00000622836 SLC44A3Q8N4M1 653 aa14.89□□□□□ -0.03
PCDHGC3-208ENST00000622836 STKLD1Q8NE28 680 aa14.89□□□□□ -0.03
PCDHGC3-208ENST00000622836 SHKBP1Q8TBC3 707 aa14.89□□□□□ -0.03
PCDHGC3-208ENST00000622836 KXD1Q9BQD3 176 aa14.89□□□□□ -0.03
PCDHGC3-208ENST00000622836 SDCBP2Q9H190 292 aa14.89□□□□□ -0.03
PCDHGC3-208ENST00000622836 APOBEC3GQ9HC16 384 aaKnown RBP14.89□□□□□ -0.03
PCDHGC3-208ENST00000622836 ZNF334Q9HCZ1 680 aaPredicted RBP14.89□□□□□ -0.03
PCDHGC3-208ENST00000622836 DACH1Q9UI36 760 aa14.89□□□□□ -0.03
PCDHGC3-208ENST00000622836 RWDD2AQ9UIY3 292 aa14.89□□□□□ -0.03
PCDHGC3-208ENST00000622836 FBXL21Q9UKT6 434 aa14.89□□□□□ -0.03
PCDHGC3-208ENST00000622836 DUSP12Q9UNI6 340 aa14.89□□□□□ -0.03
PCDHGC3-208ENST00000622836 NME7Q9Y5B8 376 aa14.89□□□□□ -0.03
PCDHGC3-208ENST00000622836 TRIOO75962 3097 aa14.89□□□□□ -0.03
PCDHGC3-208ENST00000622836 ATP8B3O60423 1300 aa14.89□□□□□ -0.03
PCDHGC3-208ENST00000622836 SLC38A8A6NNN8 435 aa14.88□□□□□ -0.03
PCDHGC3-208ENST00000622836 PRR33A8MZF0 331 aa14.88□□□□□ -0.03
PCDHGC3-208ENST00000622836 TRIM66O15016 1216 aa14.88□□□□□ -0.03
PCDHGC3-208ENST00000622836 NARSO43776 548 aaKnown RBP14.88□□□□□ -0.03
PCDHGC3-208ENST00000622836 CCDC192P0DO97 292 aa14.88□□□□□ -0.03
PCDHGC3-208ENST00000622836 ORC1Q13415 861 aa14.88□□□□□ -0.03
PCDHGC3-208ENST00000622836 GPR158Q5T848 1215 aa14.88□□□□□ -0.03
PCDHGC3-208ENST00000622836 VSTM1Q6UX27 236 aa14.88□□□□□ -0.03
PCDHGC3-208ENST00000622836 ACOT1Q86TX2 421 aa14.88□□□□□ -0.03
PCDHGC3-208ENST00000622836 UNC93AQ86WB7 457 aa14.88□□□□□ -0.03
PCDHGC3-208ENST00000622836 ZSCAN18Q8TBC5 510 aaPredicted RBP14.88□□□□□ -0.03
PCDHGC3-208ENST00000622836 GPT2Q8TD30 523 aa14.88□□□□□ -0.03
PCDHGC3-208ENST00000622836 SEMA4DQ92854 862 aa14.88□□□□□ -0.03
PCDHGC3-208ENST00000622836 SLC35C1Q96A29 364 aa14.88□□□□□ -0.03
PCDHGC3-208ENST00000622836 PBXIP1Q96AQ6 731 aa14.88□□□□□ -0.03
PCDHGC3-208ENST00000622836 LRFN3Q9BTN0 628 aa14.88□□□□□ -0.03
PCDHGC3-208ENST00000622836 LRRC3Q9BY71 257 aa14.88□□□□□ -0.03
PCDHGC3-208ENST00000622836 BCO2Q9BYV7 579 aa14.88□□□□□ -0.03
PCDHGC3-208ENST00000622836 GPR88Q9GZN0 384 aa14.88□□□□□ -0.03
PCDHGC3-208ENST00000622836 ELOVL4Q9GZR5 314 aa14.88□□□□□ -0.03
PCDHGC3-208ENST00000622836 CYP3A43Q9HB55 503 aa14.88□□□□□ -0.03
PCDHGC3-208ENST00000622836 ZFP14Q9HCL3 533 aa14.88□□□□□ -0.03
PCDHGC3-208ENST00000622836 C11orf16Q9NQ32 467 aa14.88□□□□□ -0.03
PCDHGC3-208ENST00000622836 LRRN2O75325 713 aa14.87□□□□□ -0.03
PCDHGC3-208ENST00000622836 MOSPD3O75425 235 aa14.87□□□□□ -0.03
PCDHGC3-208ENST00000622836 MBD3O95983 291 aa14.87□□□□□ -0.03
PCDHGC3-208ENST00000622836 CFHP08603 1231 aa14.87□□□□□ -0.03
PCDHGC3-208ENST00000622836 SRFP11831 508 aa14.87□□□□□ -0.03
PCDHGC3-208ENST00000622836 FMO5P49326 533 aa14.87□□□□□ -0.03
PCDHGC3-208ENST00000622836 MCCD1P59942 119 aaPredicted RBP14.87□□□□□ -0.03
PCDHGC3-208ENST00000622836 CYP4F8P98187 520 aa14.87□□□□□ -0.03
PCDHGC3-208ENST00000622836 FAM78AQ5JUQ0 283 aa14.87□□□□□ -0.03
PCDHGC3-208ENST00000622836 GAREM2Q75VX8 874 aa14.87□□□□□ -0.03
PCDHGC3-208ENST00000622836 RPP25Q9BUL9 199 aaKnown RBP14.87□□□□□ -0.03
PCDHGC3-208ENST00000622836 ZNF518BQ9C0D4 1074 aa14.87□□□□□ -0.03
PCDHGC3-208ENST00000622836 MFSD1Q9H3U5 465 aa14.87□□□□□ -0.03
PCDHGC3-208ENST00000622836 UXTQ9UBK9 157 aaPredicted RBP14.87□□□□□ -0.03
PCDHGC3-208ENST00000622836 HMGXB4Q9UGU5 601 aa14.87□□□□□ -0.03
PCDHGC3-208ENST00000622836 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.87□□□□□ -0.03
PCDHGC3-208ENST00000622836 TECTAO75443 2155 aa14.86□□□□□ -0.03
PCDHGC3-208ENST00000622836 F8VP50 259 aa14.86□□□□□ -0.03
PCDHGC3-208ENST00000622836 CLDN5O00501 218 aa14.86□□□□□ -0.03
PCDHGC3-208ENST00000622836 NRG2O14511 850 aaPredicted RBP14.86□□□□□ -0.03
PCDHGC3-208ENST00000622836 RFX1P22670 979 aa14.86□□□□□ -0.03
PCDHGC3-208ENST00000622836 NLRP12P59046 1061 aa14.86□□□□□ -0.03
PCDHGC3-208ENST00000622836 LRMPQ12912 555 aa14.86□□□□□ -0.03
PCDHGC3-208ENST00000622836 DPCR1Q3MIW9 517 aa14.86□□□□□ -0.03
PCDHGC3-208ENST00000622836 STXBP5Q5T5C0 1151 aa14.86□□□□□ -0.03
PCDHGC3-208ENST00000622836 TANGO2Q6ICL3 276 aa14.86□□□□□ -0.03
PCDHGC3-208ENST00000622836 HFE2Q6ZVN8 426 aa14.86□□□□□ -0.03
PCDHGC3-208ENST00000622836 TTC39CQ8N584 583 aa14.86□□□□□ -0.03
PCDHGC3-208ENST00000622836 MRPS31Q92665 395 aaKnown RBP14.86□□□□□ -0.03
PCDHGC3-208ENST00000622836 SMARCD2Q92925 531 aa14.86□□□□□ -0.03
PCDHGC3-208ENST00000622836 ZSWIM3Q96MP5 696 aa14.86□□□□□ -0.03
PCDHGC3-208ENST00000622836 ASB16Q96NS5 453 aa14.86□□□□□ -0.03
PCDHGC3-208ENST00000622836 NT5C1AQ9BXI3 368 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms