RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 RARS2Q5T160 578 aaKnown RBP16.83■□□□□ 0.29
GABRB3-215ENST00000622697 ZSWIM2Q8NEG5 633 aa16.83■□□□□ 0.29
GABRB3-215ENST00000622697 DACT3Q96B18 629 aaPredicted RBP16.83■□□□□ 0.29
GABRB3-215ENST00000622697 MAGEB18Q96M61 343 aa16.83■□□□□ 0.29
GABRB3-215ENST00000622697 CGRRF1Q99675 332 aa16.83■□□□□ 0.29
GABRB3-215ENST00000622697 NDFIP2Q9NV92 336 aa16.83■□□□□ 0.29
GABRB3-215ENST00000622697 FZD1Q9UP38 647 aa16.83■□□□□ 0.29
GABRB3-215ENST00000622697 CYP2C9P11712 490 aa16.83■□□□□ 0.28
GABRB3-215ENST00000622697 MUTP22033 750 aa16.83■□□□□ 0.28
GABRB3-215ENST00000622697 FBXO16Q8IX29 292 aaPredicted RBP16.83■□□□□ 0.28
GABRB3-215ENST00000622697 TMC2Q8TDI7 906 aa16.83■□□□□ 0.28
GABRB3-215ENST00000622697 AKT1S1Q96B36 256 aa16.83■□□□□ 0.28
GABRB3-215ENST00000622697 PAFAH2Q99487 392 aa16.83■□□□□ 0.28
GABRB3-215ENST00000622697 CCDC90BQ9GZT6 254 aa16.83■□□□□ 0.28
GABRB3-215ENST00000622697 YY1AP1Q9H869 796 aa16.83■□□□□ 0.28
GABRB3-215ENST00000622697 GCLCP48506 637 aaPredicted RBP16.83■□□□□ 0.28
GABRB3-215ENST00000622697 RHBDL3P58872 404 aa16.83■□□□□ 0.28
GABRB3-215ENST00000622697 CNGA3Q16281 694 aa16.83■□□□□ 0.28
GABRB3-215ENST00000622697 STAMBPL1Q96FJ0 436 aa16.83■□□□□ 0.28
GABRB3-215ENST00000622697 GRID1Q9ULK0 1009 aa16.83■□□□□ 0.28
GABRB3-215ENST00000622697 HNRNPCL1O60812 293 aaKnown RBP16.83■□□□□ 0.28
GABRB3-215ENST00000622697 MYL2P10916 166 aa16.83■□□□□ 0.28
GABRB3-215ENST00000622697 KCNA3P22001 575 aa16.83■□□□□ 0.28
GABRB3-215ENST00000622697 TRIP10Q15642 601 aa16.83■□□□□ 0.28
GABRB3-215ENST00000622697 DNAL1Q4LDG9 190 aa16.83■□□□□ 0.28
GABRB3-215ENST00000622697 GALNT4Q8N4A0 578 aa16.83■□□□□ 0.28
GABRB3-215ENST00000622697 ANKRD63C9JTQ0 380 aa16.82■□□□□ 0.28
GABRB3-215ENST00000622697 KLC1Q07866 573 aa16.82■□□□□ 0.28
GABRB3-215ENST00000622697 LRRC6Q86X45 466 aa16.82■□□□□ 0.28
GABRB3-215ENST00000622697 RNF168Q8IYW5 571 aaPredicted RBP16.82■□□□□ 0.28
GABRB3-215ENST00000622697 SPDYE1Q8NFV5 336 aaPredicted RBP16.82■□□□□ 0.28
GABRB3-215ENST00000622697 DNAJC19Q96DA6 116 aa16.82■□□□□ 0.28
GABRB3-215ENST00000622697 ZBTB45Q96K62 511 aaPredicted RBP16.82■□□□□ 0.28
GABRB3-215ENST00000622697 REXO2Q9Y3B8 237 aaKnown RBP16.82■□□□□ 0.28
GABRB3-215ENST00000622697 PPARGP37231 505 aaPredicted RBP16.82■□□□□ 0.28
GABRB3-215ENST00000622697 ITIH4Q14624 930 aa16.82■□□□□ 0.28
GABRB3-215ENST00000622697 ECM1Q16610 540 aa16.82■□□□□ 0.28
GABRB3-215ENST00000622697 LAYNQ6UX15 382 aa16.82■□□□□ 0.28
GABRB3-215ENST00000622697 IFNEQ86WN2 208 aa16.82■□□□□ 0.28
GABRB3-215ENST00000622697 NUP93Q8N1F7 819 aa16.82■□□□□ 0.28
GABRB3-215ENST00000622697 SCFD2Q8WU76 684 aa16.82■□□□□ 0.28
GABRB3-215ENST00000622697 C10orf88Q9H8K7 445 aa16.82■□□□□ 0.28
GABRB3-215ENST00000622697 PPCSQ9HAB8 311 aa16.82■□□□□ 0.28
GABRB3-215ENST00000622697 SPATA31A6Q5VVP1 1343 aa16.82■□□□□ 0.28
GABRB3-215ENST00000622697 CYP2B6P20813 491 aa16.82■□□□□ 0.28
GABRB3-215ENST00000622697 SPRP35270 261 aaPredicted RBP16.82■□□□□ 0.28
GABRB3-215ENST00000622697 PDK1Q15118 436 aa16.82■□□□□ 0.28
GABRB3-215ENST00000622697 MTDHQ86UE4 582 aaKnown RBP16.82■□□□□ 0.28
GABRB3-215ENST00000622697 ACTL9Q8TC94 416 aa16.82■□□□□ 0.28
GABRB3-215ENST00000622697 ARHGEF38Q9NXL2 777 aa16.82■□□□□ 0.28
GABRB3-215ENST00000622697 SPAG6O75602 509 aa16.82■□□□□ 0.28
GABRB3-215ENST00000622697 PTF1AQ7RTS3 328 aa16.82■□□□□ 0.28
GABRB3-215ENST00000622697 AVPR1AP37288 418 aa16.81■□□□□ 0.28
GABRB3-215ENST00000622697 BMPR2Q13873 1038 aa16.81■□□□□ 0.28
GABRB3-215ENST00000622697 RFWD2Q8NHY2 731 aa16.81■□□□□ 0.28
GABRB3-215ENST00000622697 URGCPQ8TCY9 931 aa16.81■□□□□ 0.28
GABRB3-215ENST00000622697 FAM172AQ8WUF8 416 aa16.81■□□□□ 0.28
GABRB3-215ENST00000622697 TFB1MQ8WVM0 346 aaKnown RBP16.81■□□□□ 0.28
GABRB3-215ENST00000622697 DCLK3Q9C098 648 aa16.81■□□□□ 0.28
GABRB3-215ENST00000622697 M0QYT0 321 aa16.81■□□□□ 0.28
GABRB3-215ENST00000622697 CXCL8P10145 99 aa16.81■□□□□ 0.28
GABRB3-215ENST00000622697 KCNA2P16389 499 aa16.81■□□□□ 0.28
GABRB3-215ENST00000622697 PPP3CAQ08209 521 aa16.81■□□□□ 0.28
GABRB3-215ENST00000622697 CCNG2Q16589 344 aa16.81■□□□□ 0.28
GABRB3-215ENST00000622697 EXD1Q8NHP7 514 aa16.81■□□□□ 0.28
GABRB3-215ENST00000622697 NRBF2Q96F24 287 aa16.81■□□□□ 0.28
GABRB3-215ENST00000622697 CHST7Q9NS84 486 aa16.81■□□□□ 0.28
GABRB3-215ENST00000622697 USP18Q9UMW8 372 aa16.81■□□□□ 0.28
GABRB3-215ENST00000622697 ADCY3O60266 1144 aa16.81■□□□□ 0.28
GABRB3-215ENST00000622697 STIP1P31948 543 aaKnown RBP16.81■□□□□ 0.28
GABRB3-215ENST00000622697 R3HDM1Q15032 1099 aaKnown RBP16.81■□□□□ 0.28
GABRB3-215ENST00000622697 DCAF4L1Q3SXM0 396 aa16.81■□□□□ 0.28
GABRB3-215ENST00000622697 BOLA3Q53S33 107 aa16.81■□□□□ 0.28
GABRB3-215ENST00000622697 ABRAQ8N0Z2 381 aa16.81■□□□□ 0.28
GABRB3-215ENST00000622697 PTGER2P43116 358 aa16.81■□□□□ 0.28
GABRB3-215ENST00000622697 KIZQ2M2Z5 673 aa16.81■□□□□ 0.28
GABRB3-215ENST00000622697 MPZL3Q6UWV2 235 aa16.81■□□□□ 0.28
GABRB3-215ENST00000622697 IL1RL2Q9HB29 575 aa16.81■□□□□ 0.28
GABRB3-215ENST00000622697 TJP2Q9UDY2 1190 aa16.81■□□□□ 0.28
GABRB3-215ENST00000622697 PRDM4Q9UKN5 801 aa16.81■□□□□ 0.28
GABRB3-215ENST00000622697 STAG3L1P0CL83 205 aa16.81■□□□□ 0.28
GABRB3-215ENST00000622697 FUT2Q10981 343 aa16.81■□□□□ 0.28
GABRB3-215ENST00000622697 BAP1Q92560 729 aa16.81■□□□□ 0.28
GABRB3-215ENST00000622697 IKZF4Q9H2S9 585 aa16.81■□□□□ 0.28
GABRB3-215ENST00000622697 CTNNAL1Q9UBT7 734 aa16.81■□□□□ 0.28
GABRB3-215ENST00000622697 MYO5BQ9ULV0 1848 aa16.81■□□□□ 0.28
GABRB3-215ENST00000622697 ETFBP38117 255 aa16.8■□□□□ 0.28
GABRB3-215ENST00000622697 MED21Q13503 144 aa16.8■□□□□ 0.28
GABRB3-215ENST00000622697 RCN1Q15293 331 aa16.8■□□□□ 0.28
GABRB3-215ENST00000622697 APOL2Q9BQE5 337 aa16.8■□□□□ 0.28
GABRB3-215ENST00000622697 MMTAG2Q9BU76 263 aaKnown RBP16.8■□□□□ 0.28
GABRB3-215ENST00000622697 PCDHGC5Q9Y5F6 944 aa16.8■□□□□ 0.28
GABRB3-215ENST00000622697 RPS6KL1Q9Y6S9 549 aa16.8■□□□□ 0.28
GABRB3-215ENST00000622697 TLR2O60603 784 aa16.8■□□□□ 0.28
GABRB3-215ENST00000622697 ZC3H11AO75152 810 aaKnown RBP eCLIP16.8■□□□□ 0.28
GABRB3-215ENST00000622697 PYGBP11216 843 aa16.8■□□□□ 0.28
GABRB3-215ENST00000622697 AARSP49588 968 aaKnown RBP eCLIP16.8■□□□□ 0.28
GABRB3-215ENST00000622697 LBRQ14739 615 aaKnown RBP16.8■□□□□ 0.28
GABRB3-215ENST00000622697 LY6KQ17RY6 165 aa16.8■□□□□ 0.28
GABRB3-215ENST00000622697 ACCSLQ4AC99 568 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms