RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 GRXCR1A8MXD5 290 aa5.8□□□□□ -1.48
CPNE3-213ENST00000622183 TRIM24O15164 1050 aa5.8□□□□□ -1.48
CPNE3-213ENST00000622183 ZNF185O15231 689 aa5.8□□□□□ -1.48
CPNE3-213ENST00000622183 PRICKLE3O43900 615 aaPredicted RBP5.8□□□□□ -1.48
CPNE3-213ENST00000622183 ZNF623O75123 536 aa5.8□□□□□ -1.48
CPNE3-213ENST00000622183 ITGA5P08648 1049 aa5.8□□□□□ -1.48
CPNE3-213ENST00000622183 ACO1P21399 889 aaKnown RBP5.8□□□□□ -1.48
CPNE3-213ENST00000622183 ANXA11P50995 505 aaKnown RBP5.8□□□□□ -1.48
CPNE3-213ENST00000622183 ITGA8P53708 1063 aa5.8□□□□□ -1.48
CPNE3-213ENST00000622183 LILRA4P59901 499 aa5.8□□□□□ -1.48
CPNE3-213ENST00000622183 KRT17Q04695 432 aa5.8□□□□□ -1.48
CPNE3-213ENST00000622183 PPFIA1Q13136 1202 aa5.8□□□□□ -1.48
CPNE3-213ENST00000622183 ZIK1Q3SY52 487 aaPredicted RBP5.8□□□□□ -1.48
CPNE3-213ENST00000622183 MRNIPQ6NTE8 343 aa5.8□□□□□ -1.48
CPNE3-213ENST00000622183 FOXR2Q6PJQ5 311 aa5.8□□□□□ -1.48
CPNE3-213ENST00000622183 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.8□□□□□ -1.48
CPNE3-213ENST00000622183 SLC30A10Q6XR72 485 aa5.8□□□□□ -1.48
CPNE3-213ENST00000622183 LCNL1Q6ZST4 164 aa5.8□□□□□ -1.48
CPNE3-213ENST00000622183 CLNKQ7Z7G1 428 aa5.8□□□□□ -1.48
CPNE3-213ENST00000622183 ZNF280BQ86YH2 543 aa5.8□□□□□ -1.48
CPNE3-213ENST00000622183 MAPKAPK5Q8IW41 473 aa5.8□□□□□ -1.48
CPNE3-213ENST00000622183 Q8TCH9 128 aa5.8□□□□□ -1.48
CPNE3-213ENST00000622183 TBC1D20Q96BZ9 403 aa5.8□□□□□ -1.48
CPNE3-213ENST00000622183 TEPSINQ96N21 525 aa5.8□□□□□ -1.48
CPNE3-213ENST00000622183 NELL2Q99435 816 aa5.8□□□□□ -1.48
CPNE3-213ENST00000622183 ZSWIM1Q9BR11 485 aa5.8□□□□□ -1.48
CPNE3-213ENST00000622183 PAGR1Q9BTK6 254 aa5.8□□□□□ -1.48
CPNE3-213ENST00000622183 SLC46A2Q9BY10 475 aa5.8□□□□□ -1.48
CPNE3-213ENST00000622183 UBA5Q9GZZ9 404 aa5.8□□□□□ -1.48
CPNE3-213ENST00000622183 PCDHAC1Q9H158 963 aa5.8□□□□□ -1.48
CPNE3-213ENST00000622183 RNF181Q9P0P0 153 aa5.8□□□□□ -1.48
CPNE3-213ENST00000622183 LRFN1Q9P244 771 aa5.8□□□□□ -1.48
CPNE3-213ENST00000622183 DNMT3BQ9UBC3 853 aaKnown RBP5.8□□□□□ -1.48
CPNE3-213ENST00000622183 KCNE5Q9UJ90 142 aa5.8□□□□□ -1.48
CPNE3-213ENST00000622183 GTF2A1LQ9UNN4 478 aa5.8□□□□□ -1.48
CPNE3-213ENST00000622183 XDHP47989 1333 aa5.79□□□□□ -1.48
CPNE3-213ENST00000622183 SPATA31A3Q5VYP0 1347 aa5.79□□□□□ -1.48
CPNE3-213ENST00000622183 A0A1W2PS29 197 aa5.79□□□□□ -1.48
CPNE3-213ENST00000622183 KRTAP23-1A1A580 65 aa5.79□□□□□ -1.48
CPNE3-213ENST00000622183 TOR1BO14657 336 aa5.79□□□□□ -1.48
CPNE3-213ENST00000622183 SH3BP5O60239 455 aa5.79□□□□□ -1.48
CPNE3-213ENST00000622183 GPANK1O95872 356 aa5.79□□□□□ -1.48
CPNE3-213ENST00000622183 DHRS4L1P0CG22 281 aa5.79□□□□□ -1.48
CPNE3-213ENST00000622183 ITGALP20701 1170 aa5.79□□□□□ -1.48
CPNE3-213ENST00000622183 PPIFP30405 207 aaKnown RBP5.79□□□□□ -1.48
CPNE3-213ENST00000622183 DGKEP52429 567 aa5.79□□□□□ -1.48
CPNE3-213ENST00000622183 MC2RQ01718 297 aa5.79□□□□□ -1.48
CPNE3-213ENST00000622183 PRKG1Q13976 671 aa5.79□□□□□ -1.48
CPNE3-213ENST00000622183 CNGB1Q14028 1251 aaPredicted RBP5.79□□□□□ -1.48
CPNE3-213ENST00000622183 SLC5A9Q2M3M2 681 aa5.79□□□□□ -1.48
CPNE3-213ENST00000622183 ZNF750Q32MQ0 723 aa5.79□□□□□ -1.48
CPNE3-213ENST00000622183 PDCD4Q53EL6 469 aaKnown RBP5.79□□□□□ -1.48
CPNE3-213ENST00000622183 CACHD1Q5VU97 1274 aa5.79□□□□□ -1.48
CPNE3-213ENST00000622183 TMEM108Q6UXF1 575 aa5.79□□□□□ -1.48
CPNE3-213ENST00000622183 LRRC55Q6ZSA7 311 aa5.79□□□□□ -1.48
CPNE3-213ENST00000622183 USP49Q70CQ1 688 aa5.79□□□□□ -1.48
CPNE3-213ENST00000622183 GDF7Q7Z4P5 450 aa5.79□□□□□ -1.48
CPNE3-213ENST00000622183 KCTD20Q7Z5Y7 419 aa5.79□□□□□ -1.48
CPNE3-213ENST00000622183 CCDC28AQ8IWP9 274 aa5.79□□□□□ -1.48
CPNE3-213ENST00000622183 BPIFB1Q8TDL5 484 aa5.79□□□□□ -1.48
CPNE3-213ENST00000622183 PNISRQ8TF01 805 aaKnown RBP5.79□□□□□ -1.48
CPNE3-213ENST00000622183 EDAQ92838 391 aa5.79□□□□□ -1.48
CPNE3-213ENST00000622183 GCC1Q96CN9 775 aa5.79□□□□□ -1.48
CPNE3-213ENST00000622183 EID2BQ96D98 161 aa5.79□□□□□ -1.48
CPNE3-213ENST00000622183 RBM15Q96T37 977 aaKnown RBP eCLIP5.79□□□□□ -1.48
CPNE3-213ENST00000622183 PTDSS2Q9BVG9 487 aa5.79□□□□□ -1.48
CPNE3-213ENST00000622183 ZCCHC4Q9H5U6 513 aa5.79□□□□□ -1.48
CPNE3-213ENST00000622183 ZBTB26Q9HCK0 441 aa5.79□□□□□ -1.48
CPNE3-213ENST00000622183 PARD6AQ9NPB6 346 aa5.79□□□□□ -1.48
CPNE3-213ENST00000622183 CASS4Q9NQ75 786 aa5.79□□□□□ -1.48
CPNE3-213ENST00000622183 SAGE1Q9NXZ1 904 aa5.79□□□□□ -1.48
CPNE3-213ENST00000622183 ZMYND8Q9ULU4 1186 aaPredicted RBP5.79□□□□□ -1.48
CPNE3-213ENST00000622183 JAG2Q9Y219 1238 aa5.79□□□□□ -1.48
CPNE3-213ENST00000622183 FPGT-TNNI3KV9GXZ4 949 aa5.79□□□□□ -1.48
CPNE3-213ENST00000622183 PRAMEF33A0A0G2JMD5 474 aa5.78□□□□□ -1.48
CPNE3-213ENST00000622183 AHRRA9YTQ3 701 aa5.78□□□□□ -1.48
CPNE3-213ENST00000622183 TRIM38O00635 465 aa5.78□□□□□ -1.48
CPNE3-213ENST00000622183 PIP5K1BO14986 540 aa5.78□□□□□ -1.48
CPNE3-213ENST00000622183 PRAMEF10O60809 474 aa5.78□□□□□ -1.48
CPNE3-213ENST00000622183 PIAS2O75928 621 aa5.78□□□□□ -1.48
CPNE3-213ENST00000622183 RECQL4O94761 1208 aa5.78□□□□□ -1.48
CPNE3-213ENST00000622183 RASAL1O95294 804 aa5.78□□□□□ -1.48
CPNE3-213ENST00000622183 KCNA3P22001 575 aa5.78□□□□□ -1.48
CPNE3-213ENST00000622183 MST1P26927 711 aa5.78□□□□□ -1.48
CPNE3-213ENST00000622183 HIBADHP31937 336 aaKnown RBP5.78□□□□□ -1.48
CPNE3-213ENST00000622183 ATICP31939 592 aa5.78□□□□□ -1.48
CPNE3-213ENST00000622183 MYO1EQ12965 1108 aa5.78□□□□□ -1.48
CPNE3-213ENST00000622183 DYRK1AQ13627 763 aa5.78□□□□□ -1.48
CPNE3-213ENST00000622183 RRP1BQ14684 758 aaKnown RBP5.78□□□□□ -1.48
CPNE3-213ENST00000622183 KCNAB1Q14722 419 aa5.78□□□□□ -1.48
CPNE3-213ENST00000622183 ARHGAP15Q53QZ3 475 aa5.78□□□□□ -1.48
CPNE3-213ENST00000622183 HS1BP3Q53T59 392 aa5.78□□□□□ -1.48
CPNE3-213ENST00000622183 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.78□□□□□ -1.48
CPNE3-213ENST00000622183 TMTC4Q5T4D3 741 aa5.78□□□□□ -1.48
CPNE3-213ENST00000622183 FAXCQ5TGI0 409 aa5.78□□□□□ -1.48
CPNE3-213ENST00000622183 RAP1GAP2Q684P5 730 aa5.78□□□□□ -1.48
CPNE3-213ENST00000622183 TANGO2Q6ICL3 276 aa5.78□□□□□ -1.48
CPNE3-213ENST00000622183 MZT2AQ6P582 158 aa5.78□□□□□ -1.48
CPNE3-213ENST00000622183 ANKRD18AQ8IVF6 992 aa5.78□□□□□ -1.48
CPNE3-213ENST00000622183 STYXQ8WUJ0 223 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms