RNA–Protein interactions for RNA: ENST00000622057.4

TARDBP-227, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-227ENST00000622057 GDF9O60383 454 aa10□□□□□ -0.81
TARDBP-227ENST00000622057 LRP3O75074 770 aa10□□□□□ -0.81
TARDBP-227ENST00000622057 ATG13O75143 517 aa10□□□□□ -0.81
TARDBP-227ENST00000622057 ATP2C2O75185 946 aa10□□□□□ -0.81
TARDBP-227ENST00000622057 EGFP01133 1207 aa10□□□□□ -0.81
TARDBP-227ENST00000622057 LHX1P48742 406 aa10□□□□□ -0.81
TARDBP-227ENST00000622057 MYO1EQ12965 1108 aa10□□□□□ -0.81
TARDBP-227ENST00000622057 PSMD2Q13200 908 aa10□□□□□ -0.81
TARDBP-227ENST00000622057 ALCAMQ13740 583 aa10□□□□□ -0.81
TARDBP-227ENST00000622057 SLC39A14Q15043 492 aa10□□□□□ -0.81
TARDBP-227ENST00000622057 CSRP2Q16527 193 aa10□□□□□ -0.81
TARDBP-227ENST00000622057 CCDC142Q17RM4 750 aa10□□□□□ -0.81
TARDBP-227ENST00000622057 TMEM196Q5HYL7 178 aa10□□□□□ -0.81
TARDBP-227ENST00000622057 PRR23CQ6ZRP0 262 aa10□□□□□ -0.81
TARDBP-227ENST00000622057 CCDC65Q8IXS2 484 aa10□□□□□ -0.81
TARDBP-227ENST00000622057 ADGRF2Q8IZF7 708 aa10□□□□□ -0.81
TARDBP-227ENST00000622057 FAM160A2Q8N612 972 aaPredicted RBP10□□□□□ -0.81
TARDBP-227ENST00000622057 TOP6BLQ8N6T0 577 aa10□□□□□ -0.81
TARDBP-227ENST00000622057 RDH13Q8NBN7 331 aa10□□□□□ -0.81
TARDBP-227ENST00000622057 CXorf38Q8TB03 319 aa10□□□□□ -0.81
TARDBP-227ENST00000622057 RIN3Q8TB24 985 aa10□□□□□ -0.81
TARDBP-227ENST00000622057 NETO1Q8TDF5 533 aa10□□□□□ -0.81
TARDBP-227ENST00000622057 LEO1Q8WVC0 666 aaPredicted RBP10□□□□□ -0.81
TARDBP-227ENST00000622057 HPS3Q969F9 1004 aa10□□□□□ -0.81
TARDBP-227ENST00000622057 CNTNAP3BQ96NU0 1288 aa10□□□□□ -0.81
TARDBP-227ENST00000622057 CNTNAP3Q9BZ76 1288 aa10□□□□□ -0.81
TARDBP-227ENST00000622057 MTMR12Q9C0I1 747 aa10□□□□□ -0.81
TARDBP-227ENST00000622057 ARRDC1-AS1Q9H2J1 176 aa10□□□□□ -0.81
TARDBP-227ENST00000622057 POLR3BQ9NW08 1133 aaPredicted RBP10□□□□□ -0.81
TARDBP-227ENST00000622057 DUS2Q9NX74 493 aaKnown RBP10□□□□□ -0.81
TARDBP-227ENST00000622057 GDAP2Q9NXN4 497 aa10□□□□□ -0.81
TARDBP-227ENST00000622057 MAGEC2Q9UBF1 373 aaPredicted RBP10□□□□□ -0.81
TARDBP-227ENST00000622057 ITGA11Q9UKX5 1188 aa10□□□□□ -0.81
TARDBP-227ENST00000622057 ZNF292O60281 2723 aa10□□□□□ -0.81
TARDBP-227ENST00000622057 COL4A2P08572 1712 aa9.99□□□□□ -0.81
TARDBP-227ENST00000622057 SCN1AP35498 2009 aa9.99□□□□□ -0.81
TARDBP-227ENST00000622057 TRAV19A0A0A6YYK7 116 aa9.99□□□□□ -0.81
TARDBP-227ENST00000622057 FRMD3A2A2Y4 597 aa9.99□□□□□ -0.81
TARDBP-227ENST00000622057 ZNF233A6NK53 670 aa9.99□□□□□ -0.81
TARDBP-227ENST00000622057 SOBPA7XYQ1 873 aa9.99□□□□□ -0.81
TARDBP-227ENST00000622057 GABRDO14764 452 aa9.99□□□□□ -0.81
TARDBP-227ENST00000622057 RNF40O75150 1001 aa9.99□□□□□ -0.81
TARDBP-227ENST00000622057 TADA3O75528 432 aa9.99□□□□□ -0.81
TARDBP-227ENST00000622057 RPP40O75818 363 aaKnown RBP9.99□□□□□ -0.81
TARDBP-227ENST00000622057 NOL4O94818 638 aa9.99□□□□□ -0.81
TARDBP-227ENST00000622057 TNNC2P02585 160 aa9.99□□□□□ -0.81
TARDBP-227ENST00000622057 CKMP06732 381 aa9.99□□□□□ -0.81
TARDBP-227ENST00000622057 PDGFRBP09619 1106 aa9.99□□□□□ -0.81
TARDBP-227ENST00000622057 USP17L7P0C7H9 530 aa9.99□□□□□ -0.81
TARDBP-227ENST00000622057 CCDC192P0DO97 292 aa9.99□□□□□ -0.81
TARDBP-227ENST00000622057 HDCP19113 662 aa9.99□□□□□ -0.81
TARDBP-227ENST00000622057 LMO2P25791 158 aa9.99□□□□□ -0.81
TARDBP-227ENST00000622057 PCSK1P29120 753 aa9.99□□□□□ -0.81
TARDBP-227ENST00000622057 HOXA6P31267 233 aa9.99□□□□□ -0.81
TARDBP-227ENST00000622057 GJA4P35212 333 aa9.99□□□□□ -0.81
TARDBP-227ENST00000622057 GRIK1P39086 918 aa9.99□□□□□ -0.81
TARDBP-227ENST00000622057 IFNAR2P48551 515 aa9.99□□□□□ -0.81
TARDBP-227ENST00000622057 PSMC1P62191 440 aaKnown RBP9.99□□□□□ -0.81
TARDBP-227ENST00000622057 FAM160A1Q05DH4 1040 aa9.99□□□□□ -0.81
TARDBP-227ENST00000622057 ZNF268Q14587 947 aaPredicted RBP9.99□□□□□ -0.81
TARDBP-227ENST00000622057 MTF1Q14872 753 aa9.99□□□□□ -0.81
TARDBP-227ENST00000622057 PDGFRLQ15198 375 aa9.99□□□□□ -0.81
TARDBP-227ENST00000622057 STK38Q15208 465 aa9.99□□□□□ -0.81
TARDBP-227ENST00000622057 SURF1Q15526 300 aa9.99□□□□□ -0.81
TARDBP-227ENST00000622057 CCDC6Q16204 474 aa9.99□□□□□ -0.81
TARDBP-227ENST00000622057 DUOXA2Q1HG44 320 aa9.99□□□□□ -0.81
TARDBP-227ENST00000622057 SOWAHAQ2M3V2 549 aa9.99□□□□□ -0.81
TARDBP-227ENST00000622057 DPH6Q7L8W6 267 aa9.99□□□□□ -0.81
TARDBP-227ENST00000622057 CACNA2D4Q7Z3S7 1137 aa9.99□□□□□ -0.81
TARDBP-227ENST00000622057 ARL14EPQ8N8R7 260 aaPredicted RBP9.99□□□□□ -0.81
TARDBP-227ENST00000622057 FSIP1Q8NA03 581 aa9.99□□□□□ -0.81
TARDBP-227ENST00000622057 GLIS3Q8NEA6 775 aa9.99□□□□□ -0.81
TARDBP-227ENST00000622057 OR5B17Q8NGF7 314 aa9.99□□□□□ -0.81
TARDBP-227ENST00000622057 CHFRQ96EP1 664 aa9.99□□□□□ -0.81
TARDBP-227ENST00000622057 HPDLQ96IR7 371 aa9.99□□□□□ -0.81
TARDBP-227ENST00000622057 SLC22A12Q96S37 553 aa9.99□□□□□ -0.81
TARDBP-227ENST00000622057 MMS19Q96T76 1030 aa9.99□□□□□ -0.81
TARDBP-227ENST00000622057 PKMYT1Q99640 499 aa9.99□□□□□ -0.81
TARDBP-227ENST00000622057 P2RY13Q9BPV8 354 aa9.99□□□□□ -0.81
TARDBP-227ENST00000622057 ZSCAN16Q9H4T2 348 aaPredicted RBP9.99□□□□□ -0.81
TARDBP-227ENST00000622057 ECT2Q9H8V3 914 aa9.99□□□□□ -0.81
TARDBP-227ENST00000622057 ABCB6Q9NP58 842 aa9.99□□□□□ -0.81
TARDBP-227ENST00000622057 INTS13Q9NVM9 706 aa9.99□□□□□ -0.81
TARDBP-227ENST00000622057 SIX4Q9UIU6 781 aa9.99□□□□□ -0.81
TARDBP-227ENST00000622057 MTMR6Q9Y217 621 aa9.99□□□□□ -0.81
TARDBP-227ENST00000622057 C2orf78A6NCI8 922 aa9.98□□□□□ -0.81
TARDBP-227ENST00000622057 SLC30A4O14863 429 aa9.98□□□□□ -0.81
TARDBP-227ENST00000622057 KIAA0391O15091 583 aaKnown RBP9.98□□□□□ -0.81
TARDBP-227ENST00000622057 CST3P01034 146 aaPredicted RBP9.98□□□□□ -0.81
TARDBP-227ENST00000622057 DRD1P21728 446 aa9.98□□□□□ -0.81
TARDBP-227ENST00000622057 BDNFP23560 247 aa9.98□□□□□ -0.81
TARDBP-227ENST00000622057 CYP27A1Q02318 531 aa9.98□□□□□ -0.81
TARDBP-227ENST00000622057 NR1H3Q13133 447 aa9.98□□□□□ -0.81
TARDBP-227ENST00000622057 CFAP221Q4G0U5 840 aa9.98□□□□□ -0.81
TARDBP-227ENST00000622057 AASDHQ4L235 1098 aaPredicted RBP9.98□□□□□ -0.81
TARDBP-227ENST00000622057 PPM1JQ5JR12 505 aa9.98□□□□□ -0.81
TARDBP-227ENST00000622057 NAIF1Q69YI7 327 aaPredicted RBP9.98□□□□□ -0.81
TARDBP-227ENST00000622057 FAM171BQ6P995 826 aa9.98□□□□□ -0.81
TARDBP-227ENST00000622057 C4orf50Q6ZRC1 276 aa9.98□□□□□ -0.81
TARDBP-227ENST00000622057 STXBP4Q6ZWJ1 553 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms