RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 ZC3H7BQ9UGR2 993 aaKnown RBP9.65□□□□□ -0.86
GGA3-223ENST00000621870 FBXL5Q9UKA1 691 aa9.65□□□□□ -0.86
GGA3-223ENST00000621870 PCDHB5Q9Y5E4 795 aa9.65□□□□□ -0.86
GGA3-223ENST00000621870 MRPL42Q9Y6G3 142 aaKnown RBP9.65□□□□□ -0.86
GGA3-223ENST00000621870 GRID2IPA4D2P6 1211 aa9.65□□□□□ -0.86
GGA3-223ENST00000621870 MAP3K7O43318 606 aa9.65□□□□□ -0.86
GGA3-223ENST00000621870 ONECUT3O60422 494 aaPredicted RBP9.65□□□□□ -0.86
GGA3-223ENST00000621870 NOL3O60936 208 aaKnown RBP9.65□□□□□ -0.86
GGA3-223ENST00000621870 ZWINTO95229 277 aa9.65□□□□□ -0.86
GGA3-223ENST00000621870 GFAPP14136 432 aa9.65□□□□□ -0.86
GGA3-223ENST00000621870 MAGOHP61326 146 aaKnown RBP9.65□□□□□ -0.86
GGA3-223ENST00000621870 MYBPC2Q14324 1141 aa9.65□□□□□ -0.86
GGA3-223ENST00000621870 ATG16L1Q676U5 607 aa9.65□□□□□ -0.86
GGA3-223ENST00000621870 C1orf186Q6ZWK4 172 aa9.65□□□□□ -0.86
GGA3-223ENST00000621870 CRLF3Q8IUI8 442 aa9.65□□□□□ -0.86
GGA3-223ENST00000621870 UCMAQ8WVF2 138 aa9.65□□□□□ -0.86
GGA3-223ENST00000621870 SLC35C1Q96A29 364 aa9.65□□□□□ -0.86
GGA3-223ENST00000621870 MRPL9Q9BYD2 267 aaKnown RBP9.65□□□□□ -0.86
GGA3-223ENST00000621870 ATXN3LQ9H3M9 355 aa9.65□□□□□ -0.86
GGA3-223ENST00000621870 SUN2Q9UH99 717 aa9.65□□□□□ -0.86
GGA3-223ENST00000621870 BARX2Q9UMQ3 279 aaPredicted RBP9.65□□□□□ -0.86
GGA3-223ENST00000621870 PCDHB8Q9UN66 801 aa9.65□□□□□ -0.86
GGA3-223ENST00000621870 DUSP10Q9Y6W6 482 aa9.65□□□□□ -0.86
GGA3-223ENST00000621870 CEP290O15078 2479 aa9.65□□□□□ -0.87
GGA3-223ENST00000621870 A0A087WUV0 522 aaPredicted RBP9.65□□□□□ -0.87
GGA3-223ENST00000621870 A0A1W2PQJ5 194 aa9.65□□□□□ -0.87
GGA3-223ENST00000621870 NR1H3Q13133 447 aa9.65□□□□□ -0.87
GGA3-223ENST00000621870 NAA25Q14CX7 972 aa9.65□□□□□ -0.87
GGA3-223ENST00000621870 IMPG1Q17R60 797 aa9.65□□□□□ -0.87
GGA3-223ENST00000621870 KIF19Q2TAC6 998 aa9.65□□□□□ -0.87
GGA3-223ENST00000621870 DUSP28Q4G0W2 176 aa9.65□□□□□ -0.87
GGA3-223ENST00000621870 ADCK2Q7Z695 626 aa9.65□□□□□ -0.87
GGA3-223ENST00000621870 MAP4K3Q8IVH8 894 aa9.65□□□□□ -0.87
GGA3-223ENST00000621870 FAM71DQ8N9W8 422 aa9.65□□□□□ -0.87
GGA3-223ENST00000621870 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.65□□□□□ -0.877e-10■■□□□ 14.3
GGA3-223ENST00000621870 INPP4AQ96PE3 977 aaPredicted RBP9.65□□□□□ -0.87
GGA3-223ENST00000621870 PITPNM3Q9BZ71 974 aa9.65□□□□□ -0.87
GGA3-223ENST00000621870 CELF4Q9BZC1 486 aaKnown RBP9.65□□□□□ -0.87
GGA3-223ENST00000621870 TSPYL2Q9H2G4 693 aaPredicted RBP9.65□□□□□ -0.87
GGA3-223ENST00000621870 ITGA11Q9UKX5 1188 aa9.65□□□□□ -0.87
GGA3-223ENST00000621870 CHMP2BQ9UQN3 213 aa9.65□□□□□ -0.87
GGA3-223ENST00000621870 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.65□□□□□ -0.87
GGA3-223ENST00000621870 CFAP69A5D8W1 941 aa9.64□□□□□ -0.87
GGA3-223ENST00000621870 SPATA31C2B4DYI2 1134 aa9.64□□□□□ -0.87
GGA3-223ENST00000621870 F8VZ95 297 aa9.64□□□□□ -0.87
GGA3-223ENST00000621870 SCAMP3O14828 347 aaKnown RBP9.64□□□□□ -0.87
GGA3-223ENST00000621870 HMGCRP04035 888 aa9.64□□□□□ -0.87
GGA3-223ENST00000621870 CASP5P51878 434 aa9.64□□□□□ -0.87
GGA3-223ENST00000621870 PDCLQ13371 301 aa9.64□□□□□ -0.87
GGA3-223ENST00000621870 TERF2Q15554 542 aa9.64□□□□□ -0.87
GGA3-223ENST00000621870 MAP3K21Q5TCX8 1036 aa9.64□□□□□ -0.87
GGA3-223ENST00000621870 ADAM32Q8TC27 787 aa9.64□□□□□ -0.87
GGA3-223ENST00000621870 SLC2A14Q8TDB8 520 aa9.64□□□□□ -0.87
GGA3-223ENST00000621870 SNX19Q92543 992 aa9.64□□□□□ -0.87
GGA3-223ENST00000621870 LPPQ93052 612 aa9.64□□□□□ -0.87
GGA3-223ENST00000621870 PACSIN1Q9BY11 444 aa9.64□□□□□ -0.87
GGA3-223ENST00000621870 BTBD7Q9P203 1132 aa9.64□□□□□ -0.87
GGA3-223ENST00000621870 DPP7Q9UHL4 492 aa9.64□□□□□ -0.87
GGA3-223ENST00000621870 VPS28Q9UK41 221 aa9.64□□□□□ -0.87
GGA3-223ENST00000621870 TRAF3IP3Q9Y228 551 aa9.64□□□□□ -0.87
GGA3-223ENST00000621870 CAPN7Q9Y6W3 813 aa9.64□□□□□ -0.87
GGA3-223ENST00000621870 GOLGA8QA0A0J9YX86 632 aa9.64□□□□□ -0.87
GGA3-223ENST00000621870 CCDC195A0A1B0GUA6 201 aa9.64□□□□□ -0.87
GGA3-223ENST00000621870 GOLGA8OA6NCC3 632 aa9.64□□□□□ -0.87
GGA3-223ENST00000621870 GOLGA8NF8WBI6 632 aa9.64□□□□□ -0.87
GGA3-223ENST00000621870 ZNF197O14709 1029 aa9.64□□□□□ -0.87
GGA3-223ENST00000621870 MAPK13O15264 365 aa9.64□□□□□ -0.87
GGA3-223ENST00000621870 ZBTB48P10074 688 aaPredicted RBP9.64□□□□□ -0.87
GGA3-223ENST00000621870 BDNFP23560 247 aa9.64□□□□□ -0.87
GGA3-223ENST00000621870 AXLP30530 894 aa9.64□□□□□ -0.87
GGA3-223ENST00000621870 ITGA7Q13683 1181 aa9.64□□□□□ -0.87
GGA3-223ENST00000621870 EPM2AIP1Q7L775 607 aaPredicted RBP9.64□□□□□ -0.87
GGA3-223ENST00000621870 PPHLN1Q8NEY8 458 aaKnown RBP9.64□□□□□ -0.87
GGA3-223ENST00000621870 CNOT10Q9H9A5 744 aaKnown RBP9.64□□□□□ -0.87
GGA3-223ENST00000621870 PPARGC1AQ9UBK2 798 aaKnown RBP9.64□□□□□ -0.87
GGA3-223ENST00000621870 ST3GAL5Q9UNP4 418 aa9.64□□□□□ -0.87
GGA3-223ENST00000621870 BCL9LQ86UU0 1499 aa9.64□□□□□ -0.87
GGA3-223ENST00000621870 NT5C1B-RDH14C9J2C7 533 aa9.64□□□□□ -0.87
GGA3-223ENST00000621870 SYF2O95926 243 aaKnown RBP9.64□□□□□ -0.87
GGA3-223ENST00000621870 KITP10721 976 aa9.64□□□□□ -0.87
GGA3-223ENST00000621870 LIG3P49916 1009 aa9.64□□□□□ -0.87
GGA3-223ENST00000621870 SLC12A3P55017 1021 aa9.64□□□□□ -0.87
GGA3-223ENST00000621870 ADIGQ0VDE8 80 aa9.64□□□□□ -0.87
GGA3-223ENST00000621870 ITGB3BPQ13352 177 aaPredicted RBP9.64□□□□□ -0.87
GGA3-223ENST00000621870 LBRQ14739 615 aaKnown RBP9.64□□□□□ -0.87
GGA3-223ENST00000621870 RASSF3Q86WH2 238 aa9.64□□□□□ -0.87
GGA3-223ENST00000621870 CACUL1Q86Y37 369 aa9.64□□□□□ -0.87
GGA3-223ENST00000621870 HS6ST3Q8IZP7 471 aa9.64□□□□□ -0.87
GGA3-223ENST00000621870 CARNMT1Q8N4J0 409 aa9.64□□□□□ -0.87
GGA3-223ENST00000621870 GIPC2Q8TF65 315 aa9.64□□□□□ -0.87
GGA3-223ENST00000621870 PTPRN2Q92932 1015 aa9.64□□□□□ -0.87
GGA3-223ENST00000621870 LRGUKQ96M69 825 aa9.64□□□□□ -0.87
GGA3-223ENST00000621870 CYTH2Q99418 400 aa9.64□□□□□ -0.87
GGA3-223ENST00000621870 ELAC2Q9BQ52 826 aaKnown RBP9.64□□□□□ -0.87
GGA3-223ENST00000621870 RASSF4Q9H2L5 321 aa9.64□□□□□ -0.87
GGA3-223ENST00000621870 ALG13Q9NP73 1137 aaKnown RBP9.64□□□□□ -0.87
GGA3-223ENST00000621870 HMGB1P1B2RPK0 211 aaPredicted RBP9.63□□□□□ -0.87
GGA3-223ENST00000621870 STX7O15400 261 aaKnown RBP9.63□□□□□ -0.87
GGA3-223ENST00000621870 ATP8B1O43520 1251 aa9.63□□□□□ -0.87
GGA3-223ENST00000621870 TLR2O60603 784 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms