RNA–Protein interactions for RNA: ENST00000621562.1

U1.39-201, humanhuman

BASIC

Gene U1, Length 146 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U1.39-201ENST00000621562 NEK3P51956 506 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 EFNA5P52803 228 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 AP3M2P53677 418 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 HIRAP54198 1017 aaPredicted RBP3.4□□□□□ -1.87
U1.39-201ENST00000621562 YARSP54577 528 aaKnown RBP3.4□□□□□ -1.87
U1.39-201ENST00000621562 RAD23BP54727 409 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 OTUD4Q01804 1114 aaKnown RBP3.4□□□□□ -1.87
U1.39-201ENST00000621562 TAP1Q03518 808 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 MBTD1Q05BQ5 628 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 INCA1Q0VD86 236 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 LAMTOR4Q0VGL1 99 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 SF3A3Q12874 501 aaKnown RBP eCLIP3.4□□□□□ -1.87
U1.39-201ENST00000621562 STRN3Q13033 797 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 GPS1Q13098 491 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 NR1H3Q13133 447 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 STXBP2Q15833 593 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 PKN2Q16513 984 aaKnown RBP3.4□□□□□ -1.87
U1.39-201ENST00000621562 PDK4Q16654 411 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 FAM187BQ17R55 369 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 CTC1Q2NKJ3 1217 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 ZNF699Q32M78 642 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 ACCSLQ4AC99 568 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 FAM133BQ5BKY9 247 aaKnown RBP3.4□□□□□ -1.87
U1.39-201ENST00000621562 DALRD3Q5D0E6 543 aaKnown RBP3.4□□□□□ -1.87
U1.39-201ENST00000621562 ZC3H12AQ5D1E8 599 aaKnown RBP3.4□□□□□ -1.87
U1.39-201ENST00000621562 TFDP3Q5H9I0 405 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 SPDYAQ5MJ70 313 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 FNBP1LQ5T0N5 605 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 PRAMEF18Q5VWM3 479 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 IER5Q5VY09 327 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 CES4AQ5XG92 561 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 FAM91A1Q658Y4 838 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 NUGGCQ68CJ6 796 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 CYP4F22Q6NT55 531 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 DNAJC24Q6P3W2 148 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 CCDC62Q6P9F0 684 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 ADGRD1Q6QNK2 874 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 SCARA5Q6ZMJ2 495 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 TSHZ1Q6ZSZ6 1077 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 FAM47EQ6ZV65 393 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 ZNF365Q70YC5 407 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 TBC1D1Q86TI0 1168 aaPredicted RBP3.4□□□□□ -1.87
U1.39-201ENST00000621562 CHSY1Q86X52 802 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 TRIM50Q86XT4 487 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 IFNLR1Q8IU57 520 aaPredicted RBP3.4□□□□□ -1.87
U1.39-201ENST00000621562 APOBEC3FQ8IUX4 373 aaKnown RBP3.4□□□□□ -1.87
U1.39-201ENST00000621562 CCDC50Q8IVM0 306 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 IGDCC3Q8IVU1 814 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 UNC45BQ8IWX7 931 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 TMEM192Q8IY95 271 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 SRRM1Q8IYB3 904 aaKnown RBP3.4□□□□□ -1.87
U1.39-201ENST00000621562 KIF2BQ8N4N8 673 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 CCDC89Q8N998 374 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 C1orf127Q8N9H9 656 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 BANPQ8N9N5 519 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 SLC4A11Q8NBS3 891 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 BBOF1Q8ND07 529 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 DEPTORQ8TB45 409 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 ACTL9Q8TC94 416 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 AGAP11Q8TF27 550 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 DCAKDQ8WVC6 231 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 PRPF31Q8WWY3 499 aaKnown RBP3.4□□□□□ -1.87
U1.39-201ENST00000621562 CNKSR2Q8WXI2 1034 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 USP6NLQ92738 828 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 HAUS1Q96CS2 278 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 RTP4Q96DX8 246 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 STAMBPL1Q96FJ0 436 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 PIWIL1Q96J94 861 aaKnown RBP3.4□□□□□ -1.87
U1.39-201ENST00000621562 FAM167AQ96KS9 214 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 CFAP57Q96MR6 1250 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 TTC25Q96NG3 672 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 SCLT1Q96NL6 688 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 CPXM1Q96SM3 734 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 GPR20Q99678 358 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 SGIP1Q9BQI5 828 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 PLCD4Q9BRC7 762 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 MAK16Q9BXY0 300 aaKnown RBP3.4□□□□□ -1.87
U1.39-201ENST00000621562 IMPG2Q9BZV3 1241 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 ZNF518BQ9C0D4 1074 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 LHX5Q9H2C1 402 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 LRMDAQ9H2I8 198 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 FZD8Q9H461 694 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 SMYD3Q9H7B4 428 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 TLE6Q9H808 572 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 C10orf88Q9H8K7 445 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 VRTNQ9H8Y1 702 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 PPCSQ9HAB8 311 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 MRPL47Q9HD33 250 aaKnown RBP3.4□□□□□ -1.87
U1.39-201ENST00000621562 SLCO1B3Q9NPD5 702 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 ARHGEF4Q9NR80 690 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 DDX56Q9NY93 547 aaKnown RBP3.4□□□□□ -1.87
U1.39-201ENST00000621562 SENP1Q9P0U3 644 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 SAMD15Q9P1V8 674 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 PIM2Q9P1W9 311 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 CNTN3Q9P232 1028 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 PSMC3IPQ9P2W1 217 aaPredicted RBP3.4□□□□□ -1.87
U1.39-201ENST00000621562 TBK1Q9UHD2 729 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 SLC24A2Q9UI40 661 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 GGT7Q9UJ14 662 aa3.4□□□□□ -1.87
U1.39-201ENST00000621562 RABGEF1Q9UJ41 708 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms