RNA–Protein interactions for RNA: ENST00000621136.4

SYNRG-229, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 4,841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-229ENST00000621136 ALYREFQ86V81 257 aaKnown RBP13.04□□□□□ -0.32
SYNRG-229ENST00000621136 DNAJC19Q96DA6 116 aa13.04□□□□□ -0.32
SYNRG-229ENST00000621136 OXNAD1Q96HP4 312 aaPredicted RBP13.04□□□□□ -0.32
SYNRG-229ENST00000621136 POLR3CQ9BUI4 534 aaPredicted RBP13.04□□□□□ -0.32
SYNRG-229ENST00000621136 INTS2Q9H0H0 1204 aaKnown RBP13.04□□□□□ -0.32
SYNRG-229ENST00000621136 AFG3L2Q9Y4W6 797 aa13.04□□□□□ -0.32
SYNRG-229ENST00000621136 GSC2O15499 205 aa13.04□□□□□ -0.32
SYNRG-229ENST00000621136 TRMUO75648 421 aaKnown RBP13.04□□□□□ -0.32
SYNRG-229ENST00000621136 SSTR1P30872 391 aa13.04□□□□□ -0.32
SYNRG-229ENST00000621136 TMEM63BQ5T3F8 832 aa13.04□□□□□ -0.32
SYNRG-229ENST00000621136 PCNX4Q63HM2 1172 aa13.04□□□□□ -0.32
SYNRG-229ENST00000621136 AMIGO2Q86SJ2 522 aa13.04□□□□□ -0.32
SYNRG-229ENST00000621136 RBM12BQ8IXT5 1001 aaKnown RBP13.04□□□□□ -0.32
SYNRG-229ENST00000621136 CITED4Q96RK1 184 aa13.04□□□□□ -0.32
SYNRG-229ENST00000621136 WRNIP1Q96S55 665 aa13.04□□□□□ -0.32
SYNRG-229ENST00000621136 FHDC1Q9C0D6 1143 aaPredicted RBP13.04□□□□□ -0.32
SYNRG-229ENST00000621136 EPB41L4BQ9H329 900 aa13.04□□□□□ -0.32
SYNRG-229ENST00000621136 TRIM49D1C9J1S8 452 aa13.03□□□□□ -0.32
SYNRG-229ENST00000621136 FOXD2O60548 495 aaPredicted RBP13.03□□□□□ -0.32
SYNRG-229ENST00000621136 KRT38O76015 456 aa13.03□□□□□ -0.32
SYNRG-229ENST00000621136 PKNOX1P55347 436 aa13.03□□□□□ -0.32
SYNRG-229ENST00000621136 TMEM62Q0P6H9 643 aa13.03□□□□□ -0.32
SYNRG-229ENST00000621136 SPIDRQ14159 915 aa13.03□□□□□ -0.32
SYNRG-229ENST00000621136 TRIM60Q495X7 471 aa13.03□□□□□ -0.32
SYNRG-229ENST00000621136 CERKLQ49MI3 558 aaPredicted RBP13.03□□□□□ -0.32
SYNRG-229ENST00000621136 ZNF618Q5T7W0 954 aa13.03□□□□□ -0.32
SYNRG-229ENST00000621136 CCDC81Q6ZN84 652 aa13.03□□□□□ -0.32
SYNRG-229ENST00000621136 KCTD1Q719H9 257 aa13.03□□□□□ -0.32
SYNRG-229ENST00000621136 SLF2Q8IX21 1173 aa13.03□□□□□ -0.32
SYNRG-229ENST00000621136 SCFD1Q8WVM8 642 aa13.03□□□□□ -0.32
SYNRG-229ENST00000621136 PTPRN2Q92932 1015 aa13.03□□□□□ -0.32
SYNRG-229ENST00000621136 PARVGQ9HBI0 331 aa13.03□□□□□ -0.32
SYNRG-229ENST00000621136 GTSE1Q9NYZ3 720 aa13.03□□□□□ -0.32
SYNRG-229ENST00000621136 SMIM31A0A1B0GVY4 71 aa13.03□□□□□ -0.32
SYNRG-229ENST00000621136 CCDC78A2IDD5 438 aa13.03□□□□□ -0.32
SYNRG-229ENST00000621136 SAC3D1A6NKF1 404 aa13.03□□□□□ -0.32
SYNRG-229ENST00000621136 GAS7O60861 476 aa13.03□□□□□ -0.32
SYNRG-229ENST00000621136 NMT1P30419 496 aaKnown RBP13.03□□□□□ -0.32
SYNRG-229ENST00000621136 CASP5P51878 434 aa13.03□□□□□ -0.32
SYNRG-229ENST00000621136 RNF43Q68DV7 783 aa13.03□□□□□ -0.32
SYNRG-229ENST00000621136 NUP93Q8N1F7 819 aa13.03□□□□□ -0.32
SYNRG-229ENST00000621136 NINJ2Q9NZG7 142 aa13.03□□□□□ -0.32
SYNRG-229ENST00000621136 CHKBQ9Y259 395 aa13.03□□□□□ -0.32
SYNRG-229ENST00000621136 CAB39Q9Y376 341 aaPredicted RBP13.03□□□□□ -0.32
SYNRG-229ENST00000621136 GABPAQ06546 454 aa13.03□□□□□ -0.32
SYNRG-229ENST00000621136 BMPR2Q13873 1038 aa13.03□□□□□ -0.32
SYNRG-229ENST00000621136 MORF4L2Q15014 288 aa13.03□□□□□ -0.32
SYNRG-229ENST00000621136 HADHQ16836 314 aaKnown RBP13.03□□□□□ -0.32
SYNRG-229ENST00000621136 COBLL1Q53SF7 1204 aa13.03□□□□□ -0.32
SYNRG-229ENST00000621136 FASTKD5Q7L8L6 764 aaKnown RBP13.03□□□□□ -0.32
SYNRG-229ENST00000621136 KCTD6Q8NC69 237 aa13.03□□□□□ -0.32
SYNRG-229ENST00000621136 EXT2Q93063 718 aa13.03□□□□□ -0.32
SYNRG-229ENST00000621136 RBM17Q96I25 401 aaKnown RBP13.03□□□□□ -0.32
SYNRG-229ENST00000621136 TAGLN3Q9UI15 199 aa13.03□□□□□ -0.32
SYNRG-229ENST00000621136 TLK1Q9UKI8 766 aa13.03□□□□□ -0.32
SYNRG-229ENST00000621136 PALM3A6NDB9 673 aaPredicted RBP13.02□□□□□ -0.32
SYNRG-229ENST00000621136 USP17L15C9J2P7 530 aa13.02□□□□□ -0.32
SYNRG-229ENST00000621136 USP17L13C9JLJ4 530 aa13.02□□□□□ -0.32
SYNRG-229ENST00000621136 USP17L11C9JVI0 530 aa13.02□□□□□ -0.32
SYNRG-229ENST00000621136 USP17L18D6R9N7 530 aa13.02□□□□□ -0.32
SYNRG-229ENST00000621136 USP17L22D6RA61 530 aa13.02□□□□□ -0.32
SYNRG-229ENST00000621136 USP17L17D6RBQ6 530 aa13.02□□□□□ -0.32
SYNRG-229ENST00000621136 USP17L19D6RCP7 530 aa13.02□□□□□ -0.32
SYNRG-229ENST00000621136 CFAP99D6REC4 459 aa13.02□□□□□ -0.32
SYNRG-229ENST00000621136 USP17L20D6RJB6 530 aa13.02□□□□□ -0.32
SYNRG-229ENST00000621136 ABLIM1O14639 778 aa13.02□□□□□ -0.32
SYNRG-229ENST00000621136 FKBP6O75344 327 aa13.02□□□□□ -0.32
SYNRG-229ENST00000621136 CASP4P49662 377 aa13.02□□□□□ -0.32
SYNRG-229ENST00000621136 USP17L24Q0WX57 530 aa13.02□□□□□ -0.32
SYNRG-229ENST00000621136 POMGNT1Q8WZA1 660 aa13.02□□□□□ -0.32
SYNRG-229ENST00000621136 ATAD3AQ9NVI7 634 aa13.02□□□□□ -0.32
SYNRG-229ENST00000621136 DKK3Q9UBP4 350 aa13.02□□□□□ -0.32
SYNRG-229ENST00000621136 ZNF804BA4D1E1 1349 aa13.02□□□□□ -0.32
SYNRG-229ENST00000621136 KIAA0391O15091 583 aaKnown RBP13.02□□□□□ -0.32
SYNRG-229ENST00000621136 NR4A1P22736 598 aa13.02□□□□□ -0.32
SYNRG-229ENST00000621136 INPP1P49441 399 aa13.02□□□□□ -0.32
SYNRG-229ENST00000621136 KIF19Q2TAC6 998 aa13.02□□□□□ -0.32
SYNRG-229ENST00000621136 IFNLR1Q8IU57 520 aaPredicted RBP13.02□□□□□ -0.32
SYNRG-229ENST00000621136 IGSF9BQ9UPX0 1349 aa13.02□□□□□ -0.32
SYNRG-229ENST00000621136 WEE2P0C1S8 567 aa13.02□□□□□ -0.33
SYNRG-229ENST00000621136 KRT3P12035 628 aa13.02□□□□□ -0.33
SYNRG-229ENST00000621136 PON1P27169 355 aa13.02□□□□□ -0.33
SYNRG-229ENST00000621136 BFSP2Q13515 415 aa13.02□□□□□ -0.33
SYNRG-229ENST00000621136 FAXCQ5TGI0 409 aa13.02□□□□□ -0.33
SYNRG-229ENST00000621136 C12orf60Q5U649 245 aa13.02□□□□□ -0.33
SYNRG-229ENST00000621136 TMEM53Q6P2H8 277 aa13.02□□□□□ -0.33
SYNRG-229ENST00000621136 DENND5BQ6ZUT9 1274 aa13.02□□□□□ -0.33
SYNRG-229ENST00000621136 OTOAQ7RTW8 1153 aa13.02□□□□□ -0.33
SYNRG-229ENST00000621136 CELF1Q92879 486 aaKnown RBP13.02□□□□□ -0.33
SYNRG-229ENST00000621136 CSRNP1Q96S65 589 aa13.02□□□□□ -0.33
SYNRG-229ENST00000621136 CADM1Q9BY67 442 aaKnown RBP13.02□□□□□ -0.33
SYNRG-229ENST00000621136 PCDHA1Q9Y5I3 950 aa13.02□□□□□ -0.33
SYNRG-229ENST00000621136 TNS2Q63HR2 1409 aa13.02□□□□□ -0.33
SYNRG-229ENST00000621136 MYOCOSA0A1B0GUC4 107 aa13.02□□□□□ -0.33
SYNRG-229ENST00000621136 TLR3O15455 904 aaKnown RBP13.02□□□□□ -0.33
SYNRG-229ENST00000621136 TRIM16O95361 564 aa13.02□□□□□ -0.33
SYNRG-229ENST00000621136 APOA1P02647 267 aa13.02□□□□□ -0.33
SYNRG-229ENST00000621136 CYP11B2P19099 503 aa13.02□□□□□ -0.33
SYNRG-229ENST00000621136 SLC5A3P53794 718 aa13.02□□□□□ -0.33
SYNRG-229ENST00000621136 ADAM17P78536 824 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms