RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 LRCH1Q9Y2L9 728 aa7.29□□□□□ -1.24
NEDD9-216ENST00000620854 DENND3A2RUS2 1198 aa7.29□□□□□ -1.24
NEDD9-216ENST00000620854 FAM155BO75949 473 aa7.29□□□□□ -1.24
NEDD9-216ENST00000620854 DDNO94850 711 aaPredicted RBP7.29□□□□□ -1.24
NEDD9-216ENST00000620854 MT-ND3P03897 115 aa7.29□□□□□ -1.24
NEDD9-216ENST00000620854 ADSSP30520 456 aa7.29□□□□□ -1.24
NEDD9-216ENST00000620854 CAP2P40123 477 aa7.29□□□□□ -1.24
NEDD9-216ENST00000620854 GCLCP48506 637 aaPredicted RBP7.29□□□□□ -1.24
NEDD9-216ENST00000620854 CCNG1P51959 295 aa7.29□□□□□ -1.24
NEDD9-216ENST00000620854 ALDH18A1P54886 795 aaKnown RBP7.29□□□□□ -1.24
NEDD9-216ENST00000620854 HADHBP55084 474 aaKnown RBP7.29□□□□□ -1.24
NEDD9-216ENST00000620854 IGBP1P78318 339 aa7.29□□□□□ -1.24
NEDD9-216ENST00000620854 SLC34A1Q06495 639 aa7.29□□□□□ -1.24
NEDD9-216ENST00000620854 MSS51Q4VC12 460 aa7.29□□□□□ -1.24
NEDD9-216ENST00000620854 WASHC2DQ5SRD0 308 aa7.29□□□□□ -1.24
NEDD9-216ENST00000620854 ANKRD22Q5VYY1 191 aa7.29□□□□□ -1.24
NEDD9-216ENST00000620854 FAM83AQ86UY5 434 aa7.29□□□□□ -1.24
NEDD9-216ENST00000620854 RHOT1Q8IXI2 618 aa7.29□□□□□ -1.24
NEDD9-216ENST00000620854 GALNT15Q8N3T1 639 aa7.29□□□□□ -1.24
NEDD9-216ENST00000620854 C12orf50Q8NA57 414 aaPredicted RBP7.29□□□□□ -1.24
NEDD9-216ENST00000620854 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.29□□□□□ -1.242e-7■□□□□ 8.1
NEDD9-216ENST00000620854 TUFT1Q9NNX1 390 aa7.29□□□□□ -1.24
NEDD9-216ENST00000620854 PCMTD2Q9NV79 361 aa7.29□□□□□ -1.24
NEDD9-216ENST00000620854 WDR35Q9P2L0 1181 aa7.29□□□□□ -1.24
NEDD9-216ENST00000620854 SEPT9Q9UHD8 586 aaPredicted RBP7.29□□□□□ -1.24
NEDD9-216ENST00000620854 LGALS13Q9UHV8 139 aa7.29□□□□□ -1.24
NEDD9-216ENST00000620854 LTBP4Q8N2S1 1624 aa7.29□□□□□ -1.24
NEDD9-216ENST00000620854 PABPN1LA6NDY0 278 aaKnown RBP7.28□□□□□ -1.24
NEDD9-216ENST00000620854 MEI4A8MW99 385 aa7.28□□□□□ -1.24
NEDD9-216ENST00000620854 WNT10BO00744 389 aa7.28□□□□□ -1.24
NEDD9-216ENST00000620854 LIN7AO14910 233 aaPredicted RBP7.28□□□□□ -1.24
NEDD9-216ENST00000620854 LPXNO60711 386 aa7.28□□□□□ -1.24
NEDD9-216ENST00000620854 NOL3O60936 208 aaKnown RBP7.28□□□□□ -1.24
NEDD9-216ENST00000620854 RTN3O95197 1032 aaPredicted RBP7.28□□□□□ -1.24
NEDD9-216ENST00000620854 ACADSP16219 412 aa7.28□□□□□ -1.24
NEDD9-216ENST00000620854 CA8P35219 290 aa7.28□□□□□ -1.24
NEDD9-216ENST00000620854 EPHB1P54762 984 aa7.28□□□□□ -1.24
NEDD9-216ENST00000620854 TFAMQ00059 246 aaKnown RBP7.28□□□□□ -1.24
NEDD9-216ENST00000620854 PDE1BQ01064 536 aa7.28□□□□□ -1.24
NEDD9-216ENST00000620854 CAV1Q03135 178 aa7.28□□□□□ -1.24
NEDD9-216ENST00000620854 CCDC15Q0P6D6 951 aa7.28□□□□□ -1.24
NEDD9-216ENST00000620854 PDE1CQ14123 709 aaPredicted RBP7.28□□□□□ -1.24
NEDD9-216ENST00000620854 CCNG2Q16589 344 aa7.28□□□□□ -1.24
NEDD9-216ENST00000620854 HIF1AQ16665 826 aa7.28□□□□□ -1.24
NEDD9-216ENST00000620854 CLEC16AQ2KHT3 1053 aa7.28□□□□□ -1.24
NEDD9-216ENST00000620854 SLC45A4Q5BKX6 768 aa7.28□□□□□ -1.24
NEDD9-216ENST00000620854 FAM160B1Q5W0V3 765 aa7.28□□□□□ -1.24
NEDD9-216ENST00000620854 OR52E8Q6IFG1 317 aa7.28□□□□□ -1.24
NEDD9-216ENST00000620854 CENPUQ71F23 418 aa7.28□□□□□ -1.24
NEDD9-216ENST00000620854 FASTKD5Q7L8L6 764 aaKnown RBP7.28□□□□□ -1.24
NEDD9-216ENST00000620854 CDAN1Q8IWY9 1227 aa7.28□□□□□ -1.24
NEDD9-216ENST00000620854 MORC4Q8TE76 937 aa7.28□□□□□ -1.24
NEDD9-216ENST00000620854 PAFAH2Q99487 392 aa7.28□□□□□ -1.24
NEDD9-216ENST00000620854 IDI2Q9BXS1 227 aa7.28□□□□□ -1.24
NEDD9-216ENST00000620854 NUF2Q9BZD4 464 aa7.28□□□□□ -1.24
NEDD9-216ENST00000620854 OCEL1Q9H607 264 aa7.28□□□□□ -1.24
NEDD9-216ENST00000620854 TMEM206Q9H813 350 aa7.28□□□□□ -1.24
NEDD9-216ENST00000620854 PFDN4Q9NQP4 134 aa7.28□□□□□ -1.24
NEDD9-216ENST00000620854 NRBP2Q9NSY0 501 aa7.28□□□□□ -1.24
NEDD9-216ENST00000620854 KANSL3Q9P2N6 904 aa7.28□□□□□ -1.24
NEDD9-216ENST00000620854 SEL1LQ9UBV2 794 aa7.28□□□□□ -1.24
NEDD9-216ENST00000620854 GAKO14976 1311 aa7.28□□□□□ -1.24
NEDD9-216ENST00000620854 NHSL1Q5SYE7 1610 aa7.28□□□□□ -1.24
NEDD9-216ENST00000620854 KLHL33A6NCF5 533 aa7.28□□□□□ -1.24
NEDD9-216ENST00000620854 CRCPO75575 148 aa7.28□□□□□ -1.24
NEDD9-216ENST00000620854 TJP3O95049 919 aa7.28□□□□□ -1.24
NEDD9-216ENST00000620854 RFC1P35251 1148 aaPredicted RBP7.28□□□□□ -1.24
NEDD9-216ENST00000620854 C1orf146Q5VVC0 180 aa7.28□□□□□ -1.24
NEDD9-216ENST00000620854 SCARA5Q6ZMJ2 495 aa7.28□□□□□ -1.24
NEDD9-216ENST00000620854 ARID3BQ8IVW6 561 aaPredicted RBP7.28□□□□□ -1.24
NEDD9-216ENST00000620854 ZCCHC9Q8N567 271 aaKnown RBP7.28□□□□□ -1.24
NEDD9-216ENST00000620854 NSUN6Q8TEA1 469 aaKnown RBP7.28□□□□□ -1.24
NEDD9-216ENST00000620854 MOV10L1Q9BXT6 1211 aaKnown RBP7.28□□□□□ -1.24
NEDD9-216ENST00000620854 ACAD9Q9H845 621 aa7.28□□□□□ -1.24
NEDD9-216ENST00000620854 CYP4F11Q9HBI6 524 aa7.28□□□□□ -1.24
NEDD9-216ENST00000620854 KMT5AQ9NQR1 393 aa7.28□□□□□ -1.24
NEDD9-216ENST00000620854 PSMC3IPQ9P2W1 217 aaPredicted RBP7.28□□□□□ -1.24
NEDD9-216ENST00000620854 PACSIN3Q9UKS6 424 aa7.28□□□□□ -1.24
NEDD9-216ENST00000620854 SHANK3Q9BYB0 1731 aa7.28□□□□□ -1.24
NEDD9-216ENST00000620854 C2CD2LO14523 706 aa7.28□□□□□ -1.24
NEDD9-216ENST00000620854 FCHO1O14526 889 aa7.28□□□□□ -1.24
NEDD9-216ENST00000620854 AVILO75366 819 aa7.28□□□□□ -1.24
NEDD9-216ENST00000620854 WFS1O76024 890 aa7.28□□□□□ -1.24
NEDD9-216ENST00000620854 PYGBP11216 843 aa7.28□□□□□ -1.24
NEDD9-216ENST00000620854 ARL4CP56559 192 aa7.28□□□□□ -1.24
NEDD9-216ENST00000620854 COG7P83436 770 aa7.28□□□□□ -1.24
NEDD9-216ENST00000620854 SPDYE2Q495Y8 402 aa7.28□□□□□ -1.24
NEDD9-216ENST00000620854 FNBP1LQ5T0N5 605 aa7.28□□□□□ -1.24
NEDD9-216ENST00000620854 SCARA3Q6AZY7 606 aa7.28□□□□□ -1.24
NEDD9-216ENST00000620854 IRGCQ6NXR0 463 aa7.28□□□□□ -1.24
NEDD9-216ENST00000620854 MOXD1Q6UVY6 613 aa7.28□□□□□ -1.24
NEDD9-216ENST00000620854 RFX6Q8HWS3 928 aa7.28□□□□□ -1.24
NEDD9-216ENST00000620854 POU5F2Q8N7G0 328 aa7.28□□□□□ -1.24
NEDD9-216ENST00000620854 FBXO36Q8NEA4 188 aa7.28□□□□□ -1.24
NEDD9-216ENST00000620854 PYDC1Q8WXC3 89 aa7.28□□□□□ -1.24
NEDD9-216ENST00000620854 TUBGCP5Q96RT8 1024 aa7.28□□□□□ -1.24
NEDD9-216ENST00000620854 UBE2OQ9C0C9 1292 aaKnown RBP7.28□□□□□ -1.24
NEDD9-216ENST00000620854 KCNH7Q9NS40 1196 aa7.28□□□□□ -1.24
NEDD9-216ENST00000620854 PCSK1NQ9UHG2 260 aa7.28□□□□□ -1.24
NEDD9-216ENST00000620854 SMG5Q9UPR3 1016 aaKnown RBP7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms