RNA–Protein interactions for RNA: ENST00000619644.4

SMTN-223, Transcript of smoothelin, human

TSL 2 BASIC

Gene SMTN, Length 3,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMTN-223	ENST00000619644	PEX10	O60683	326 aa		15.19	■□□□□ 0.02
SMTN-223	ENST00000619644	DKC1	O60832	514 aa	Known RBP eCLIP	15.19	■□□□□ 0.02
SMTN-223	ENST00000619644	ASMTL	O95671	621 aa		15.19	■□□□□ 0.02
SMTN-223	ENST00000619644	MARK3	P27448	753 aa		15.19	■□□□□ 0.02
SMTN-223	ENST00000619644	MYL6	P60660	151 aa		15.19	■□□□□ 0.02
SMTN-223	ENST00000619644	LAMB3	Q13751	1172 aa		15.19	■□□□□ 0.02
SMTN-223	ENST00000619644	RCN2	Q14257	317 aa		15.19	■□□□□ 0.02
SMTN-223	ENST00000619644	CCDC6	Q16204	474 aa		15.19	■□□□□ 0.02
SMTN-223	ENST00000619644	TAF1B	Q53T94	588 aa	Predicted RBP	15.19	■□□□□ 0.02
SMTN-223	ENST00000619644	PLEKHA7	Q6IQ23	1121 aa		15.19	■□□□□ 0.02
SMTN-223	ENST00000619644	TRIM72	Q6ZMU5	477 aa		15.19	■□□□□ 0.02
SMTN-223	ENST00000619644	CALN1	Q9BXU9	219 aa		15.19	■□□□□ 0.02
SMTN-223	ENST00000619644	CST8	O60676	142 aa		15.19	■□□□□ 0.02
SMTN-223	ENST00000619644	STAM2	O75886	525 aa		15.19	■□□□□ 0.02
SMTN-223	ENST00000619644	OGDH	Q02218	1023 aa		15.19	■□□□□ 0.02
SMTN-223	ENST00000619644	KHDC1	Q4VXA5	237 aa	Known RBP	15.19	■□□□□ 0.02
SMTN-223	ENST00000619644	RFWD3	Q6PCD5	774 aa		15.19	■□□□□ 0.02
SMTN-223	ENST00000619644	MTDH	Q86UE4	582 aa	Known RBP	15.19	■□□□□ 0.02
SMTN-223	ENST00000619644	TTLL6	Q8N841	843 aa		15.19	■□□□□ 0.02
SMTN-223	ENST00000619644	ZNF526	Q8TF50	670 aa	Predicted RBP	15.19	■□□□□ 0.02
SMTN-223	ENST00000619644	HSPH1	Q92598	858 aa		15.19	■□□□□ 0.02
SMTN-223	ENST00000619644	IFT43	Q96FT9	208 aa		15.19	■□□□□ 0.02
SMTN-223	ENST00000619644	C17orf75	Q9HAS0	396 aa		15.19	■□□□□ 0.02
SMTN-223	ENST00000619644	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	15.19	■□□□□ 0.02
SMTN-223	ENST00000619644	ARHGAP28	Q9P2N2	729 aa		15.19	■□□□□ 0.02
SMTN-223	ENST00000619644	STOML1	Q9UBI4	398 aa		15.19	■□□□□ 0.02
SMTN-223	ENST00000619644	SCOC	Q9UIL1	159 aa		15.19	■□□□□ 0.02
SMTN-223	ENST00000619644	ZFP69B	Q9UJL9	534 aa		15.19	■□□□□ 0.02
SMTN-223	ENST00000619644	ACTL7B	Q9Y614	415 aa		15.19	■□□□□ 0.02
SMTN-223	ENST00000619644	IKBKG	Q9Y6K9	419 aa		15.19	■□□□□ 0.02
SMTN-223	ENST00000619644	RBBP6	Q7Z6E9	1792 aa	Known RBP	15.18	■□□□□ 0.02
SMTN-223	ENST00000619644		A0A1B0GVG6	124 aa		15.18	■□□□□ 0.02
SMTN-223	ENST00000619644	RNF8	O76064	485 aa		15.18	■□□□□ 0.02
SMTN-223	ENST00000619644	GCA	P28676	217 aa		15.18	■□□□□ 0.02
SMTN-223	ENST00000619644	VHL	P40337	213 aa		15.18	■□□□□ 0.02
SMTN-223	ENST00000619644	FYB2	Q5VWT5	728 aa		15.18	■□□□□ 0.02
SMTN-223	ENST00000619644	ANKRD22	Q5VYY1	191 aa		15.18	■□□□□ 0.02
SMTN-223	ENST00000619644	THNSL1	Q8IYQ7	743 aa		15.18	■□□□□ 0.02
SMTN-223	ENST00000619644	ALLC	Q8N6M5	410 aa		15.18	■□□□□ 0.02
SMTN-223	ENST00000619644	ACTL9	Q8TC94	416 aa		15.18	■□□□□ 0.02
SMTN-223	ENST00000619644	SH3TC2	Q8TF17	1288 aa		15.18	■□□□□ 0.02
SMTN-223	ENST00000619644	TTC25	Q96NG3	672 aa		15.18	■□□□□ 0.02
SMTN-223	ENST00000619644	PPP1R12C	Q9BZL4	782 aa		15.18	■□□□□ 0.02
SMTN-223	ENST00000619644	PPP1R1B	Q9UD71	204 aa	Predicted RBP	15.18	■□□□□ 0.02
SMTN-223	ENST00000619644	LRCH1	Q9Y2L9	728 aa		15.18	■□□□□ 0.02
SMTN-223	ENST00000619644	TTLL13P	A6NNM8	815 aa		15.18	■□□□□ 0.02
SMTN-223	ENST00000619644	MAGEB2	O15479	319 aa		15.18	■□□□□ 0.02
SMTN-223	ENST00000619644	LMNA	P02545	664 aa	Known RBP	15.18	■□□□□ 0.02
SMTN-223	ENST00000619644	KCNA2	P16389	499 aa		15.18	■□□□□ 0.02
SMTN-223	ENST00000619644	HIRA	P54198	1017 aa	Predicted RBP	15.18	■□□□□ 0.02
SMTN-223	ENST00000619644	OTUD4	Q01804	1114 aa	Known RBP	15.18	■□□□□ 0.02
SMTN-223	ENST00000619644	TFDP3	Q5H9I0	405 aa		15.18	■□□□□ 0.02
SMTN-223	ENST00000619644	FOXB2	Q5VYV0	432 aa		15.18	■□□□□ 0.02
SMTN-223	ENST00000619644	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	15.18	■□□□□ 0.02
SMTN-223	ENST00000619644	TMEM35B	Q8NCS4	154 aa		15.18	■□□□□ 0.02
SMTN-223	ENST00000619644	C10orf82	Q8WW14	230 aa		15.18	■□□□□ 0.02
SMTN-223	ENST00000619644	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	15.18	■□□□□ 0.02
SMTN-223	ENST00000619644	TJP2	Q9UDY2	1190 aa		15.18	■□□□□ 0.02
SMTN-223	ENST00000619644	CFAP69	A5D8W1	941 aa		15.17	■□□□□ 0.02
SMTN-223	ENST00000619644	SIGLEC16	A6NMB1	481 aa		15.17	■□□□□ 0.02
SMTN-223	ENST00000619644	MAP3K6	O95382	1288 aa		15.17	■□□□□ 0.02
SMTN-223	ENST00000619644	GLRA2	P23416	452 aa		15.17	■□□□□ 0.02
SMTN-223	ENST00000619644	VCP	P55072	806 aa	Known RBP	15.17	■□□□□ 0.02
SMTN-223	ENST00000619644	GDF10	P55107	478 aa		15.17	■□□□□ 0.02
SMTN-223	ENST00000619644	C15orf39	Q6ZRI6	1047 aa		15.17	■□□□□ 0.02
SMTN-223	ENST00000619644	ZC3H18	Q86VM9	953 aa	Known RBP	15.17	■□□□□ 0.02
SMTN-223	ENST00000619644	RFX6	Q8HWS3	928 aa		15.17	■□□□□ 0.02
SMTN-223	ENST00000619644	DRAXIN	Q8NBI3	349 aa	Predicted RBP	15.17	■□□□□ 0.02
SMTN-223	ENST00000619644	TTC17	Q96AE7	1141 aa		15.17	■□□□□ 0.02
SMTN-223	ENST00000619644	GORASP1	Q9BQQ3	440 aa		15.17	■□□□□ 0.02
SMTN-223	ENST00000619644	ZNF302	Q9NR11	478 aa		15.17	■□□□□ 0.02
SMTN-223	ENST00000619644	CHMP2B	Q9UQN3	213 aa		15.17	■□□□□ 0.02
SMTN-223	ENST00000619644	TRAFD1	O14545	582 aa	Predicted RBP	15.17	■□□□□ 0.02
SMTN-223	ENST00000619644	TBC1D12	O60347	775 aa		15.17	■□□□□ 0.02
SMTN-223	ENST00000619644	RGS20	O76081	388 aa		15.17	■□□□□ 0.02
SMTN-223	ENST00000619644	TBXAS1	P24557	533 aa	Predicted RBP	15.17	■□□□□ 0.02
SMTN-223	ENST00000619644	PTPN4	P29074	926 aa		15.17	■□□□□ 0.02
SMTN-223	ENST00000619644	C1QBP	Q07021	282 aa	Known RBP	15.17	■□□□□ 0.02
SMTN-223	ENST00000619644	CXCL9	Q07325	125 aa		15.17	■□□□□ 0.02
SMTN-223	ENST00000619644	RCN1	Q15293	331 aa		15.17	■□□□□ 0.02
SMTN-223	ENST00000619644	WDR72	Q3MJ13	1102 aa		15.17	■□□□□ 0.02
SMTN-223	ENST00000619644	XKR3	Q5GH77	459 aa		15.17	■□□□□ 0.02
SMTN-223	ENST00000619644	SNX30	Q5VWJ9	437 aa		15.17	■□□□□ 0.02
SMTN-223	ENST00000619644	CEP128	Q6ZU80	1094 aa		15.17	■□□□□ 0.02
SMTN-223	ENST00000619644	RFX8	Q6ZV50	586 aa		15.17	■□□□□ 0.02
SMTN-223	ENST00000619644	PHF13	Q86YI8	300 aa	Predicted RBP	15.17	■□□□□ 0.02
SMTN-223	ENST00000619644	FBXO36	Q8NEA4	188 aa		15.17	■□□□□ 0.02
SMTN-223	ENST00000619644	FGD4	Q96M96	766 aa		15.17	■□□□□ 0.02
SMTN-223	ENST00000619644	MIPEP	Q99797	713 aa		15.17	■□□□□ 0.02
SMTN-223	ENST00000619644	MYOZ2	Q9NPC6	264 aa		15.17	■□□□□ 0.02
SMTN-223	ENST00000619644	TMEM191C	A6NGB0	347 aa		15.17	■□□□□ 0.02
SMTN-223	ENST00000619644	EDF1	O60869	148 aa	Known RBP	15.17	■□□□□ 0.02
SMTN-223	ENST00000619644	TMEM191B	P0C7N4	346 aa		15.17	■□□□□ 0.02
SMTN-223	ENST00000619644	MMP8	P22894	467 aa		15.17	■□□□□ 0.02
SMTN-223	ENST00000619644	RAP1GAP	P47736	663 aa		15.17	■□□□□ 0.02
SMTN-223	ENST00000619644	NR1H3	Q13133	447 aa		15.17	■□□□□ 0.02
SMTN-223	ENST00000619644	C4orf50	Q6ZRC1	276 aa		15.17	■□□□□ 0.02
SMTN-223	ENST00000619644	OTOA	Q7RTW8	1153 aa		15.17	■□□□□ 0.02
SMTN-223	ENST00000619644	SAMD7	Q7Z3H4	446 aa		15.17	■□□□□ 0.02
SMTN-223	ENST00000619644	FAM83A	Q86UY5	434 aa		15.17	■□□□□ 0.02

Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms