RNA–Protein interactions for RNA: ENST00000618934.1

PCDHGB3-202, Transcript of protocadherin gamma subfamily B, 3, humanhuman

APPRIS P1 BASIC

Gene PCDHGB3, Length 2,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-202ENST00000618934 KRT19P08727 400 aa20.26■□□□□ 0.83
PCDHGB3-202ENST00000618934 CXCL8P10145 99 aa20.26■□□□□ 0.83
PCDHGB3-202ENST00000618934 FGFR1P11362 822 aa20.26■□□□□ 0.83
PCDHGB3-202ENST00000618934 KRT3P12035 628 aa20.26■□□□□ 0.83
PCDHGB3-202ENST00000618934 SLC1A5Q15758 541 aa20.26■□□□□ 0.83
PCDHGB3-202ENST00000618934 RAB6CQ53S08 254 aa20.26■□□□□ 0.83
PCDHGB3-202ENST00000618934 GPR20Q99678 358 aa20.26■□□□□ 0.83
PCDHGB3-202ENST00000618934 PITPNM3Q9BZ71 974 aa20.26■□□□□ 0.83
PCDHGB3-202ENST00000618934 ZNF518BQ9C0D4 1074 aa20.26■□□□□ 0.83
PCDHGB3-202ENST00000618934 SPATC1LQ9H0A9 340 aa20.26■□□□□ 0.83
PCDHGB3-202ENST00000618934 RAB6CQ9H0N0 254 aa20.26■□□□□ 0.83
PCDHGB3-202ENST00000618934 FARP1Q9Y4F1 1045 aaPredicted RBP20.26■□□□□ 0.83
PCDHGB3-202ENST00000618934 MCM3APO60318 1980 aa20.26■□□□□ 0.83
PCDHGB3-202ENST00000618934 ERBB2P04626 1255 aa20.25■□□□□ 0.83
PCDHGB3-202ENST00000618934 NQO1P15559 274 aaKnown RBP20.25■□□□□ 0.83
PCDHGB3-202ENST00000618934 PROZP22891 400 aa20.25■□□□□ 0.83
PCDHGB3-202ENST00000618934 SSTR1P30872 391 aa20.25■□□□□ 0.83
PCDHGB3-202ENST00000618934 LACTBP83111 547 aaPredicted RBP20.25■□□□□ 0.83
PCDHGB3-202ENST00000618934 PPP1R21Q6ZMI0 780 aa20.25■□□□□ 0.83
PCDHGB3-202ENST00000618934 CCHCR1Q8TD31 782 aa20.25■□□□□ 0.83
PCDHGB3-202ENST00000618934 TBC1D31Q96DN5 1066 aa20.25■□□□□ 0.83
PCDHGB3-202ENST00000618934 MAK16Q9BXY0 300 aaKnown RBP20.25■□□□□ 0.83
PCDHGB3-202ENST00000618934 PCDH9Q9HC56 1237 aa20.25■□□□□ 0.83
PCDHGB3-202ENST00000618934 DDX56Q9NY93 547 aaKnown RBP20.25■□□□□ 0.83
PCDHGB3-202ENST00000618934 AGTPBP1Q9UPW5 1226 aa20.25■□□□□ 0.83
PCDHGB3-202ENST00000618934 SIGLEC16A6NMB1 481 aa20.25■□□□□ 0.83
PCDHGB3-202ENST00000618934 A8MUI8 341 aa20.25■□□□□ 0.83
PCDHGB3-202ENST00000618934 INO80B-WBP1J3KQ70 363 aa20.25■□□□□ 0.83
PCDHGB3-202ENST00000618934 KRT15P19012 456 aa20.25■□□□□ 0.83
PCDHGB3-202ENST00000618934 CTCFP49711 727 aaPredicted RBP20.25■□□□□ 0.83
PCDHGB3-202ENST00000618934 RAD23BP54727 409 aa20.25■□□□□ 0.83
PCDHGB3-202ENST00000618934 PSMC1P62191 440 aaKnown RBP20.25■□□□□ 0.83
PCDHGB3-202ENST00000618934 PREPLQ4J6C6 727 aaPredicted RBP20.25■□□□□ 0.83
PCDHGB3-202ENST00000618934 UNC45BQ8IWX7 931 aa20.25■□□□□ 0.83
PCDHGB3-202ENST00000618934 RIBC1Q8N443 379 aaPredicted RBP20.25■□□□□ 0.83
PCDHGB3-202ENST00000618934 CPT1BQ92523 772 aa20.25■□□□□ 0.83
PCDHGB3-202ENST00000618934 FGD4Q96M96 766 aa20.25■□□□□ 0.83
PCDHGB3-202ENST00000618934 NCAPGQ9BPX3 1015 aa20.25■□□□□ 0.83
PCDHGB3-202ENST00000618934 INO80BQ9C086 356 aaPredicted RBP20.25■□□□□ 0.83
PCDHGB3-202ENST00000618934 SMYD3Q9H7B4 428 aa20.25■□□□□ 0.83
PCDHGB3-202ENST00000618934 METTL5Q9NRN9 209 aaKnown RBP20.25■□□□□ 0.83
PCDHGB3-202ENST00000618934 IGKV6-21A0A0C4DH24 114 aa20.24■□□□□ 0.83
PCDHGB3-202ENST00000618934 KRT16P08779 473 aa20.24■□□□□ 0.83
PCDHGB3-202ENST00000618934 CLCN3P51790 818 aa20.24■□□□□ 0.83
PCDHGB3-202ENST00000618934 IL9RQ01113 521 aa20.24■□□□□ 0.83
PCDHGB3-202ENST00000618934 TFDP1Q14186 410 aa20.24■□□□□ 0.83
PCDHGB3-202ENST00000618934 ATF7IP2Q5U623 682 aa20.24■□□□□ 0.83
PCDHGB3-202ENST00000618934 MPZL3Q6UWV2 235 aa20.24■□□□□ 0.83
PCDHGB3-202ENST00000618934 TDRPQ86YL5 185 aa20.24■□□□□ 0.83
PCDHGB3-202ENST00000618934 TTC25Q96NG3 672 aa20.24■□□□□ 0.83
PCDHGB3-202ENST00000618934 C12orf65Q9H3J6 166 aaKnown RBP20.24■□□□□ 0.83
PCDHGB3-202ENST00000618934 RXFP1Q9HBX9 757 aa20.24■□□□□ 0.83
PCDHGB3-202ENST00000618934 NFICP08651 508 aa20.24■□□□□ 0.83
PCDHGB3-202ENST00000618934 KDELR1P24390 212 aa20.24■□□□□ 0.83
PCDHGB3-202ENST00000618934 RPL22P35268 128 aaKnown RBP20.24■□□□□ 0.83
PCDHGB3-202ENST00000618934 TSHZ1Q6ZSZ6 1077 aa20.24■□□□□ 0.83
PCDHGB3-202ENST00000618934 XYLT1Q86Y38 959 aa20.24■□□□□ 0.83
PCDHGB3-202ENST00000618934 ZBTB8OSQ8IWT0 167 aa20.24■□□□□ 0.83
PCDHGB3-202ENST00000618934 PPP1R16BQ96T49 567 aa20.24■□□□□ 0.83
PCDHGB3-202ENST00000618934 RABGEF1Q9UJ41 708 aa20.24■□□□□ 0.83
PCDHGB3-202ENST00000618934 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.24■□□□□ 0.83
PCDHGB3-202ENST00000618934 GPR25O00155 361 aa20.23■□□□□ 0.83
PCDHGB3-202ENST00000618934 RDXP35241 583 aaKnown RBP20.23■□□□□ 0.83
PCDHGB3-202ENST00000618934 TAP1Q03518 808 aa20.23■□□□□ 0.83
PCDHGB3-202ENST00000618934 MXD4Q14582 209 aaPredicted RBP20.23■□□□□ 0.83
PCDHGB3-202ENST00000618934 WLSQ5T9L3 541 aa20.23■□□□□ 0.83
PCDHGB3-202ENST00000618934 SH3PXD2AQ5TCZ1 1133 aa20.23■□□□□ 0.83
PCDHGB3-202ENST00000618934 GADL1Q6ZQY3 521 aa20.23■□□□□ 0.83
PCDHGB3-202ENST00000618934 CENPUQ71F23 418 aa20.23■□□□□ 0.83
PCDHGB3-202ENST00000618934 C1orf127Q8N9H9 656 aa20.23■□□□□ 0.83
PCDHGB3-202ENST00000618934 SHOC2Q9UQ13 582 aa20.23■□□□□ 0.83
PCDHGB3-202ENST00000618934 PAPPA2Q9BXP8 1791 aa20.23■□□□□ 0.83
PCDHGB3-202ENST00000618934 PIK3R2O00459 728 aa20.23■□□□□ 0.83
PCDHGB3-202ENST00000618934 BAG6P46379 1132 aa20.23■□□□□ 0.83
PCDHGB3-202ENST00000618934 MKRN3Q13064 507 aaKnown RBP20.23■□□□□ 0.83
PCDHGB3-202ENST00000618934 HIF1AQ16665 826 aa20.23■□□□□ 0.83
PCDHGB3-202ENST00000618934 ELOVL4Q9GZR5 314 aa20.23■□□□□ 0.83
PCDHGB3-202ENST00000618934 CDT1Q9H211 546 aa20.23■□□□□ 0.83
PCDHGB3-202ENST00000618934 GPRC5DQ9NZD1 345 aa20.23■□□□□ 0.83
PCDHGB3-202ENST00000618934 CEP83Q9Y592 693 aa20.23■□□□□ 0.83
PCDHGB3-202ENST00000618934 CFAP73A6NFT4 308 aa20.22■□□□□ 0.83
PCDHGB3-202ENST00000618934 ACKR2O00590 384 aa20.22■□□□□ 0.83
PCDHGB3-202ENST00000618934 PRPF4O43172 522 aaKnown RBP eCLIP20.22■□□□□ 0.83
PCDHGB3-202ENST00000618934 B4GALT4O60513 344 aa20.22■□□□□ 0.83
PCDHGB3-202ENST00000618934 TNNC2P02585 160 aa20.22■□□□□ 0.83
PCDHGB3-202ENST00000618934 TGFB3P10600 412 aa20.22■□□□□ 0.83
PCDHGB3-202ENST00000618934 YWHAEP62258 255 aaKnown RBP20.22■□□□□ 0.83
PCDHGB3-202ENST00000618934 MMRN1Q13201 1228 aa20.22■□□□□ 0.83
PCDHGB3-202ENST00000618934 TMEM132AQ24JP5 1023 aa20.22■□□□□ 0.83
PCDHGB3-202ENST00000618934 SYCP2LQ5T4T6 812 aa20.22■□□□□ 0.83
PCDHGB3-202ENST00000618934 POLNQ7Z5Q5 900 aa20.22■□□□□ 0.83
PCDHGB3-202ENST00000618934 CCDC91Q7Z6B0 441 aa20.22■□□□□ 0.83
PCDHGB3-202ENST00000618934 NAT8LQ8N9F0 302 aa20.22■□□□□ 0.83
PCDHGB3-202ENST00000618934 SLC4A11Q8NBS3 891 aa20.22■□□□□ 0.83
PCDHGB3-202ENST00000618934 KLHL29Q96CT2 875 aa20.22■□□□□ 0.83
PCDHGB3-202ENST00000618934 ANKRD36BP1Q96IX9 119 aa20.22■□□□□ 0.83
PCDHGB3-202ENST00000618934 FZD8Q9H461 694 aa20.22■□□□□ 0.83
PCDHGB3-202ENST00000618934 GEMIN8Q9NWZ8 242 aaKnown RBP20.22■□□□□ 0.83
PCDHGB3-202ENST00000618934 KLHL14Q9P2G3 628 aa20.22■□□□□ 0.83
PCDHGB3-202ENST00000618934 PHTF1Q9UMS5 762 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms