RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 ECEL1O95672 775 aa18.29■□□□□ 0.52
PCDHGC3-205ENST00000617641 CD4P01730 458 aa18.29■□□□□ 0.52
PCDHGC3-205ENST00000617641 PFKMP08237 780 aa18.29■□□□□ 0.52
PCDHGC3-205ENST00000617641 ELNP15502 786 aa18.29■□□□□ 0.52
PCDHGC3-205ENST00000617641 HSD17B3P37058 310 aa18.29■□□□□ 0.52
PCDHGC3-205ENST00000617641 DRG2P55039 364 aaKnown RBP18.29■□□□□ 0.52
PCDHGC3-205ENST00000617641 PLTPP55058 493 aa18.29■□□□□ 0.52
PCDHGC3-205ENST00000617641 NFX1Q12986 1120 aaKnown RBP18.29■□□□□ 0.52
PCDHGC3-205ENST00000617641 UAP1Q16222 522 aaPredicted RBP18.29■□□□□ 0.52
PCDHGC3-205ENST00000617641 FBXO47Q5MNV8 452 aa18.29■□□□□ 0.52
PCDHGC3-205ENST00000617641 LRRC38Q5VT99 294 aa18.29■□□□□ 0.52
PCDHGC3-205ENST00000617641 ZDHHC24Q6UX98 284 aa18.29■□□□□ 0.52
PCDHGC3-205ENST00000617641 OR6B3Q8NGW1 331 aa18.29■□□□□ 0.52
PCDHGC3-205ENST00000617641 LRRC45Q96CN5 670 aa18.29■□□□□ 0.52
PCDHGC3-205ENST00000617641 SLITRK1Q96PX8 696 aa18.29■□□□□ 0.52
PCDHGC3-205ENST00000617641 FAM118BQ9BPY3 351 aa18.29■□□□□ 0.52
PCDHGC3-205ENST00000617641 LPIN3Q9BQK8 851 aa18.29■□□□□ 0.52
PCDHGC3-205ENST00000617641 KIF3CO14782 793 aa18.29■□□□□ 0.52
PCDHGC3-205ENST00000617641 ADAMTS4O75173 837 aa18.29■□□□□ 0.52
PCDHGC3-205ENST00000617641 ATF7P17544 494 aaPredicted RBP18.29■□□□□ 0.52
PCDHGC3-205ENST00000617641 MFSD7Q6UXD7 560 aa18.29■□□□□ 0.52
PCDHGC3-205ENST00000617641 TMC3Q7Z5M5 1100 aa18.29■□□□□ 0.52
PCDHGC3-205ENST00000617641 RCOR2Q8IZ40 523 aa18.29■□□□□ 0.52
PCDHGC3-205ENST00000617641 MCRS1Q96EZ8 462 aa18.29■□□□□ 0.52
PCDHGC3-205ENST00000617641 DPEP3Q9H4B8 488 aa18.29■□□□□ 0.52
PCDHGC3-205ENST00000617641 FAM204AQ9H8W3 233 aa18.29■□□□□ 0.52
PCDHGC3-205ENST00000617641 XPNPEP3Q9NQH7 507 aa18.29■□□□□ 0.52
PCDHGC3-205ENST00000617641 KRT10P13645 584 aa18.28■□□□□ 0.52
PCDHGC3-205ENST00000617641 ADCY2Q08462 1091 aa18.28■□□□□ 0.52
PCDHGC3-205ENST00000617641 PPP1R7Q15435 360 aa18.28■□□□□ 0.52
PCDHGC3-205ENST00000617641 KAZNQ674X7 775 aa18.28■□□□□ 0.52
PCDHGC3-205ENST00000617641 ARFGAP1Q8N6T3 406 aa18.28■□□□□ 0.52
PCDHGC3-205ENST00000617641 FBXO25Q8TCJ0 367 aa18.28■□□□□ 0.52
PCDHGC3-205ENST00000617641 RBM41Q96IZ5 413 aaKnown RBP18.28■□□□□ 0.52
PCDHGC3-205ENST00000617641 ST3GAL5Q9UNP4 418 aa18.28■□□□□ 0.52
PCDHGC3-205ENST00000617641 PLAAQ9Y263 795 aa18.28■□□□□ 0.52
PCDHGC3-205ENST00000617641 KPNA7A9QM74 516 aa18.28■□□□□ 0.52
PCDHGC3-205ENST00000617641 E5RJQ4 531 aa18.28■□□□□ 0.52
PCDHGC3-205ENST00000617641 TULP2O00295 520 aa18.28■□□□□ 0.52
PCDHGC3-205ENST00000617641 XPOTO43592 962 aaKnown RBP18.28■□□□□ 0.52
PCDHGC3-205ENST00000617641 OPA1O60313 960 aa18.28■□□□□ 0.52
PCDHGC3-205ENST00000617641 RPS6KA5O75582 802 aa18.28■□□□□ 0.52
PCDHGC3-205ENST00000617641 KRT14P02533 472 aa18.28■□□□□ 0.52
PCDHGC3-205ENST00000617641 CHRNA1P02708 482 aa18.28■□□□□ 0.52
PCDHGC3-205ENST00000617641 ASGR1P07306 291 aa18.28■□□□□ 0.52
PCDHGC3-205ENST00000617641 RGS7P49802 495 aa18.28■□□□□ 0.52
PCDHGC3-205ENST00000617641 KRT17Q04695 432 aa18.28■□□□□ 0.52
PCDHGC3-205ENST00000617641 DHX9Q08211 1270 aaKnown RBP18.28■□□□□ 0.52
PCDHGC3-205ENST00000617641 FAM102AQ5T9C2 384 aaPredicted RBP18.28■□□□□ 0.52
PCDHGC3-205ENST00000617641 RSPH3Q86UC2 560 aa18.28■□□□□ 0.52
PCDHGC3-205ENST00000617641 TTC30AQ86WT1 665 aa18.28■□□□□ 0.52
PCDHGC3-205ENST00000617641 GOLGA6L1Q8N7Z2 621 aa18.28■□□□□ 0.52
PCDHGC3-205ENST00000617641 IPO4Q8TEX9 1081 aaKnown RBP18.28■□□□□ 0.52
PCDHGC3-205ENST00000617641 FNIP1Q8TF40 1166 aa18.28■□□□□ 0.52
PCDHGC3-205ENST00000617641 RAPGEF5Q92565 580 aa18.28■□□□□ 0.52
PCDHGC3-205ENST00000617641 SLCO2A1Q92959 643 aa18.28■□□□□ 0.52
PCDHGC3-205ENST00000617641 ZFP42Q96MM3 310 aa18.28■□□□□ 0.52
PCDHGC3-205ENST00000617641 MEIS3P2A8K0S8 358 aa18.27■□□□□ 0.52
PCDHGC3-205ENST00000617641 LRCH4O75427 683 aa18.27■□□□□ 0.52
PCDHGC3-205ENST00000617641 FGFR1P11362 822 aa18.27■□□□□ 0.52
PCDHGC3-205ENST00000617641 PRKAR2AP13861 404 aaKnown RBP18.27■□□□□ 0.52
PCDHGC3-205ENST00000617641 STILQ15468 1287 aa18.27■□□□□ 0.52
PCDHGC3-205ENST00000617641 ZNF618Q5T7W0 954 aa18.27■□□□□ 0.52
PCDHGC3-205ENST00000617641 SERINC5Q86VE9 423 aa18.27■□□□□ 0.52
PCDHGC3-205ENST00000617641 KBTBD7Q8WVZ9 684 aa18.27■□□□□ 0.52
PCDHGC3-205ENST00000617641 ARL8AQ96BM9 186 aa18.27■□□□□ 0.52
PCDHGC3-205ENST00000617641 ZNF560Q96MR9 790 aa18.27■□□□□ 0.52
PCDHGC3-205ENST00000617641 SENP6Q9GZR1 1112 aaPredicted RBP18.27■□□□□ 0.52
PCDHGC3-205ENST00000617641 RNF186Q9NXI6 227 aa18.27■□□□□ 0.52
PCDHGC3-205ENST00000617641 HTTP42858 3142 aa18.27■□□□□ 0.52
PCDHGC3-205ENST00000617641 A8MXQ7 604 aa18.27■□□□□ 0.51
PCDHGC3-205ENST00000617641 PTGESO14684 152 aa18.27■□□□□ 0.51
PCDHGC3-205ENST00000617641 PDGFRBP09619 1106 aa18.27■□□□□ 0.51
PCDHGC3-205ENST00000617641 CETN2P41208 172 aa18.27■□□□□ 0.51
PCDHGC3-205ENST00000617641 NKX3-2P78367 333 aa18.27■□□□□ 0.51
PCDHGC3-205ENST00000617641 SLC25A11Q02978 314 aaKnown RBP18.27■□□□□ 0.51
PCDHGC3-205ENST00000617641 KCNA10Q16322 511 aa18.27■□□□□ 0.51
PCDHGC3-205ENST00000617641 SMTNL2Q2TAL5 461 aa18.27■□□□□ 0.51
PCDHGC3-205ENST00000617641 OR6B2Q6IFH4 312 aa18.27■□□□□ 0.51
PCDHGC3-205ENST00000617641 SPOCD1Q6ZMY3 1216 aa18.27■□□□□ 0.51
PCDHGC3-205ENST00000617641 FAM183BPQ6ZVS7 135 aa18.27■□□□□ 0.51
PCDHGC3-205ENST00000617641 UBLCP1Q8WVY7 318 aaPredicted RBP18.27■□□□□ 0.51
PCDHGC3-205ENST00000617641 PIWIL1Q96J94 861 aaKnown RBP18.27■□□□□ 0.51
PCDHGC3-205ENST00000617641 ZWILCHQ9H900 591 aa18.27■□□□□ 0.51
PCDHGC3-205ENST00000617641 LRRD1A4D1F6 860 aa18.26■□□□□ 0.51
PCDHGC3-205ENST00000617641 IL1R2P27930 398 aa18.26■□□□□ 0.51
PCDHGC3-205ENST00000617641 NOGQ13253 232 aa18.26■□□□□ 0.51
PCDHGC3-205ENST00000617641 PKDCCQ504Y2 493 aa18.26■□□□□ 0.51
PCDHGC3-205ENST00000617641 ODF2Q5BJF6 829 aa18.26■□□□□ 0.51
PCDHGC3-205ENST00000617641 TTMPQ5BVD1 217 aa18.26■□□□□ 0.51
PCDHGC3-205ENST00000617641 PMF1Q6P1K2 205 aa18.26■□□□□ 0.51
PCDHGC3-205ENST00000617641 UNC93AQ86WB7 457 aa18.26■□□□□ 0.51
PCDHGC3-205ENST00000617641 CCDC114Q96M63 670 aa18.26■□□□□ 0.51
PCDHGC3-205ENST00000617641 TSPAN18Q96SJ8 248 aa18.26■□□□□ 0.51
PCDHGC3-205ENST00000617641 OSBPL7Q9BZF2 842 aa18.26■□□□□ 0.51
PCDHGC3-205ENST00000617641 DDX56Q9NY93 547 aaKnown RBP18.26■□□□□ 0.51
PCDHGC3-205ENST00000617641 GOLGA8KD6RF30 607 aa18.26■□□□□ 0.51
PCDHGC3-205ENST00000617641 LMO2P25791 158 aa18.26■□□□□ 0.51
PCDHGC3-205ENST00000617641 TAF6P49848 677 aa18.26■□□□□ 0.51
PCDHGC3-205ENST00000617641 SP3Q02447 781 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms