RNA–Protein interactions for RNA: ENST00000617546.4

CUL4A-212, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 5,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-212ENST00000617546 DMTF1Q9Y222 760 aa10.68□□□□□ -0.7
CUL4A-212ENST00000617546 CAB39Q9Y376 341 aaPredicted RBP10.68□□□□□ -0.7
CUL4A-212ENST00000617546 RBAK-RBAKDNI3L0D1 243 aa10.67□□□□□ -0.7
CUL4A-212ENST00000617546 AREL1O15033 823 aa10.67□□□□□ -0.7
CUL4A-212ENST00000617546 EXTL3O43909 919 aa10.67□□□□□ -0.7
CUL4A-212ENST00000617546 USP10Q14694 798 aaKnown RBP10.67□□□□□ -0.7
CUL4A-212ENST00000617546 C7orf31Q8N865 590 aa10.67□□□□□ -0.7
CUL4A-212ENST00000617546 BEST2Q8NFU1 509 aa10.67□□□□□ -0.7
CUL4A-212ENST00000617546 PIGBQ92521 554 aa10.67□□□□□ -0.7
CUL4A-212ENST00000617546 FAM84BQ96KN1 310 aaPredicted RBP10.67□□□□□ -0.7
CUL4A-212ENST00000617546 EHD4Q9H223 541 aa10.67□□□□□ -0.7
CUL4A-212ENST00000617546 DHX35Q9H5Z1 703 aaKnown RBP10.67□□□□□ -0.7
CUL4A-212ENST00000617546 HMG20AQ9NP66 347 aa10.67□□□□□ -0.7
CUL4A-212ENST00000617546 TUBGCP4Q9UGJ1 667 aa10.67□□□□□ -0.7
CUL4A-212ENST00000617546 ITSN1Q15811 1721 aa10.67□□□□□ -0.7
CUL4A-212ENST00000617546 C2CD2LO14523 706 aa10.67□□□□□ -0.7
CUL4A-212ENST00000617546 MAGEB2O15479 319 aa10.67□□□□□ -0.7
CUL4A-212ENST00000617546 MPOP05164 745 aa10.67□□□□□ -0.7
CUL4A-212ENST00000617546 NFKBIAP25963 317 aa10.67□□□□□ -0.7
CUL4A-212ENST00000617546 YWHABP31946 246 aaKnown RBP10.67□□□□□ -0.7
CUL4A-212ENST00000617546 RRP1BQ14684 758 aaKnown RBP10.67□□□□□ -0.7
CUL4A-212ENST00000617546 SEL1L3Q68CR1 1132 aa10.67□□□□□ -0.7
CUL4A-212ENST00000617546 KYAT3Q6YP21 454 aaKnown RBP10.67□□□□□ -0.7
CUL4A-212ENST00000617546 PID1Q7Z2X4 250 aa10.67□□□□□ -0.7
CUL4A-212ENST00000617546 LINC00523Q86TU6 105 aa10.67□□□□□ -0.7
CUL4A-212ENST00000617546 ART4Q93070 314 aa10.67□□□□□ -0.7
CUL4A-212ENST00000617546 TOPORSQ9NS56 1045 aaPredicted RBP10.67□□□□□ -0.7
CUL4A-212ENST00000617546 ASNA1O43681 348 aa10.67□□□□□ -0.7
CUL4A-212ENST00000617546 CAPRIN1Q14444 709 aaKnown RBP10.67□□□□□ -0.7
CUL4A-212ENST00000617546 RC3H1Q5TC82 1133 aaKnown RBP10.67□□□□□ -0.7
CUL4A-212ENST00000617546 STX19Q8N4C7 294 aa10.67□□□□□ -0.7
CUL4A-212ENST00000617546 ECSITQ9BQ95 431 aa10.67□□□□□ -0.7
CUL4A-212ENST00000617546 TBC1D10AQ9BXI6 508 aa10.67□□□□□ -0.7
CUL4A-212ENST00000617546 C8orf4Q9NR00 106 aa10.67□□□□□ -0.7
CUL4A-212ENST00000617546 GINS2Q9Y248 185 aa10.67□□□□□ -0.7
CUL4A-212ENST00000617546 CFAP99D6REC4 459 aa10.67□□□□□ -0.7
CUL4A-212ENST00000617546 DAB2P98082 770 aa10.67□□□□□ -0.7
CUL4A-212ENST00000617546 PLEKHA7Q6IQ23 1121 aa10.67□□□□□ -0.7
CUL4A-212ENST00000617546 ZBTB49Q6ZSB9 765 aa10.67□□□□□ -0.7
CUL4A-212ENST00000617546 TSHZ1Q6ZSZ6 1077 aa10.67□□□□□ -0.7
CUL4A-212ENST00000617546 CCDC103Q8IW40 242 aa10.67□□□□□ -0.7
CUL4A-212ENST00000617546 OSCP1Q8WVF1 389 aa10.67□□□□□ -0.7
CUL4A-212ENST00000617546 SLC13A4Q9UKG4 626 aa10.67□□□□□ -0.7
CUL4A-212ENST00000617546 AKT3Q9Y243 479 aa10.67□□□□□ -0.7
CUL4A-212ENST00000617546 DNAJC16Q9Y2G8 782 aa10.67□□□□□ -0.7
CUL4A-212ENST00000617546 PCDHA10Q9Y5I2 948 aa10.67□□□□□ -0.7
CUL4A-212ENST00000617546 MYO1DO94832 1006 aa10.67□□□□□ -0.7
CUL4A-212ENST00000617546 LCA5LO95447 670 aa10.67□□□□□ -0.7
CUL4A-212ENST00000617546 FECHP22830 423 aa10.67□□□□□ -0.7
CUL4A-212ENST00000617546 ACAT1P24752 427 aaKnown RBP10.67□□□□□ -0.7
CUL4A-212ENST00000617546 DUPD1Q68J44 220 aa10.67□□□□□ -0.7
CUL4A-212ENST00000617546 XRRA1Q6P2D8 792 aa10.67□□□□□ -0.7
CUL4A-212ENST00000617546 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.67□□□□□ -0.7
CUL4A-212ENST00000617546 MYLK4Q86YV6 388 aaPredicted RBP10.67□□□□□ -0.7
CUL4A-212ENST00000617546 OR6B3Q8NGW1 331 aa10.67□□□□□ -0.7
CUL4A-212ENST00000617546 RNF139Q8WU17 664 aa10.67□□□□□ -0.7
CUL4A-212ENST00000617546 STMN3Q9NZ72 180 aa10.67□□□□□ -0.7
CUL4A-212ENST00000617546 NEMP1O14524 444 aa10.66□□□□□ -0.7
CUL4A-212ENST00000617546 IL18RAPO95256 599 aa10.66□□□□□ -0.7
CUL4A-212ENST00000617546 ALOX5P09917 674 aa10.66□□□□□ -0.7
CUL4A-212ENST00000617546 GPD1P21695 349 aa10.66□□□□□ -0.7
CUL4A-212ENST00000617546 ACADSBP45954 432 aa10.66□□□□□ -0.7
CUL4A-212ENST00000617546 EPS8Q12929 822 aa10.66□□□□□ -0.7
CUL4A-212ENST00000617546 TOP3AQ13472 1001 aaPredicted RBP10.66□□□□□ -0.7
CUL4A-212ENST00000617546 SLC27A3Q5K4L6 730 aa10.66□□□□□ -0.7
CUL4A-212ENST00000617546 RTKN2Q8IZC4 609 aa10.66□□□□□ -0.7
CUL4A-212ENST00000617546 SPICE1Q8N0Z3 855 aa10.66□□□□□ -0.7
CUL4A-212ENST00000617546 SVOPQ8N4V2 548 aa10.66□□□□□ -0.7
CUL4A-212ENST00000617546 LRRC39Q96DD0 335 aa10.66□□□□□ -0.7
CUL4A-212ENST00000617546 TMEM79Q9BSE2 394 aa10.66□□□□□ -0.7
CUL4A-212ENST00000617546 PRDM16Q9HAZ2 1276 aa10.66□□□□□ -0.7
CUL4A-212ENST00000617546 SESN1Q9Y6P5 492 aa10.66□□□□□ -0.7
CUL4A-212ENST00000617546 DLGAP3O95886 979 aa10.66□□□□□ -0.7
CUL4A-212ENST00000617546 CYP2C8P10632 490 aa10.66□□□□□ -0.7
CUL4A-212ENST00000617546 RALBP11234 206 aa10.66□□□□□ -0.7
CUL4A-212ENST00000617546 COPB2P35606 906 aa10.66□□□□□ -0.7
CUL4A-212ENST00000617546 EIF2B2P49770 351 aaKnown RBP10.66□□□□□ -0.7
CUL4A-212ENST00000617546 VCPP55072 806 aaKnown RBP10.66□□□□□ -0.7
CUL4A-212ENST00000617546 BNIP1Q12981 228 aa10.66□□□□□ -0.7
CUL4A-212ENST00000617546 C16orf72Q14CZ0 275 aa10.66□□□□□ -0.7
CUL4A-212ENST00000617546 CLEC16AQ2KHT3 1053 aa10.66□□□□□ -0.7
CUL4A-212ENST00000617546 TMTC4Q5T4D3 741 aa10.66□□□□□ -0.7
CUL4A-212ENST00000617546 LUZP2Q86TE4 346 aa10.66□□□□□ -0.7
CUL4A-212ENST00000617546 POP5Q969H6 163 aaKnown RBP10.66□□□□□ -0.7
CUL4A-212ENST00000617546 IFT43Q96FT9 208 aa10.66□□□□□ -0.7
CUL4A-212ENST00000617546 C9orf16Q9BUW7 83 aa10.66□□□□□ -0.7
CUL4A-212ENST00000617546 BRD8Q9H0E9 1235 aa10.66□□□□□ -0.7
CUL4A-212ENST00000617546 FBXO40Q9UH90 709 aa10.66□□□□□ -0.7
CUL4A-212ENST00000617546 DAPK2Q9UIK4 370 aa10.66□□□□□ -0.7
CUL4A-212ENST00000617546 HEATR9A2RTY3 570 aa10.66□□□□□ -0.7
CUL4A-212ENST00000617546 TCP10L2B9ZVM9 353 aa10.66□□□□□ -0.7
CUL4A-212ENST00000617546 FOXN3O00409 490 aaPredicted RBP10.66□□□□□ -0.7
CUL4A-212ENST00000617546 GDF11O95390 407 aa10.66□□□□□ -0.7
CUL4A-212ENST00000617546 ASNSP08243 561 aa10.66□□□□□ -0.7
CUL4A-212ENST00000617546 ITGA4P13612 1032 aa10.66□□□□□ -0.7
CUL4A-212ENST00000617546 CYP11B1P15538 503 aa10.66□□□□□ -0.7
CUL4A-212ENST00000617546 C1QBPQ07021 282 aaKnown RBP10.66□□□□□ -0.7
CUL4A-212ENST00000617546 ZNF568Q3ZCX4 644 aa10.66□□□□□ -0.7
CUL4A-212ENST00000617546 TMEM119Q4V9L6 283 aa10.66□□□□□ -0.7
CUL4A-212ENST00000617546 NSUN6Q8TEA1 469 aaKnown RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms