RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 ACOT1Q86TX2 421 aa5.9□□□□□ -1.47
SYNCRIP-204ENST00000616122 FAM131BQ86XD5 332 aa5.9□□□□□ -1.47
SYNCRIP-204ENST00000616122 TNIP3Q96KP6 325 aa5.9□□□□□ -1.47
SYNCRIP-204ENST00000616122 NUDCD1Q96RS6 583 aa5.9□□□□□ -1.47
SYNCRIP-204ENST00000616122 GCOM2Q9BZD3 368 aaPredicted RBP5.9□□□□□ -1.47
SYNCRIP-204ENST00000616122 VPS11Q9H270 941 aa5.9□□□□□ -1.47
SYNCRIP-204ENST00000616122 C10orf88Q9H8K7 445 aa5.9□□□□□ -1.47
SYNCRIP-204ENST00000616122 ZFYVE1Q9HBF4 777 aa5.9□□□□□ -1.47
SYNCRIP-204ENST00000616122 ZDHHC18Q9NUE0 388 aa5.9□□□□□ -1.47
SYNCRIP-204ENST00000616122 KIAA1257Q9ULG3 409 aa5.9□□□□□ -1.47
SYNCRIP-204ENST00000616122 UMODL1Q5DID0 1318 aa5.9□□□□□ -1.47
SYNCRIP-204ENST00000616122 IGF2BP3O00425 579 aaKnown RBP eCLIP5.9□□□□□ -1.47
SYNCRIP-204ENST00000616122 KCNN4O15554 427 aa5.9□□□□□ -1.47
SYNCRIP-204ENST00000616122 SPAG6O75602 509 aa5.9□□□□□ -1.47
SYNCRIP-204ENST00000616122 SNRPAP09012 282 aaKnown RBP5.9□□□□□ -1.47
SYNCRIP-204ENST00000616122 STAG3L1P0CL83 205 aa5.9□□□□□ -1.47
SYNCRIP-204ENST00000616122 CHRNB2P17787 502 aa5.9□□□□□ -1.47
SYNCRIP-204ENST00000616122 DRD4P21917 467 aa5.9□□□□□ -1.47
SYNCRIP-204ENST00000616122 ARL1P40616 181 aaPredicted RBP5.9□□□□□ -1.47
SYNCRIP-204ENST00000616122 PKN2Q16513 984 aaKnown RBP5.9□□□□□ -1.47
SYNCRIP-204ENST00000616122 KIZQ2M2Z5 673 aa5.9□□□□□ -1.47
SYNCRIP-204ENST00000616122 MUM1Q2TAK8 710 aa5.9□□□□□ -1.47
SYNCRIP-204ENST00000616122 LVRNQ6Q4G3 990 aa5.9□□□□□ -1.47
SYNCRIP-204ENST00000616122 PHF13Q86YI8 300 aaPredicted RBP5.9□□□□□ -1.47
SYNCRIP-204ENST00000616122 FBXO36Q8NEA4 188 aa5.9□□□□□ -1.47
SYNCRIP-204ENST00000616122 REPS2Q8NFH8 660 aa5.9□□□□□ -1.47
SYNCRIP-204ENST00000616122 CDT1Q9H211 546 aa5.9□□□□□ -1.47
SYNCRIP-204ENST00000616122 KIF9Q9HAQ2 790 aa5.9□□□□□ -1.47
SYNCRIP-204ENST00000616122 GPATCH2LQ9NWQ4 482 aa5.9□□□□□ -1.47
SYNCRIP-204ENST00000616122 SLC24A2Q9UI40 661 aa5.9□□□□□ -1.47
SYNCRIP-204ENST00000616122 SPTAN1Q13813 2472 aaKnown RBP5.89□□□□□ -1.47
SYNCRIP-204ENST00000616122 GPC4O75487 556 aa5.89□□□□□ -1.47
SYNCRIP-204ENST00000616122 BAG2O95816 211 aa5.89□□□□□ -1.47
SYNCRIP-204ENST00000616122 VDRP11473 427 aa5.89□□□□□ -1.47
SYNCRIP-204ENST00000616122 ELK3P41970 407 aa5.89□□□□□ -1.47
SYNCRIP-204ENST00000616122 ALDH5A1P51649 535 aaPredicted RBP5.89□□□□□ -1.47
SYNCRIP-204ENST00000616122 ZNF200P98182 395 aaPredicted RBP5.89□□□□□ -1.47
SYNCRIP-204ENST00000616122 PTK6Q13882 451 aa5.89□□□□□ -1.47
SYNCRIP-204ENST00000616122 CNGA2Q16280 664 aa5.89□□□□□ -1.47
SYNCRIP-204ENST00000616122 LY6KQ17RY6 165 aa5.89□□□□□ -1.47
SYNCRIP-204ENST00000616122 MFSD5Q6N075 450 aa5.89□□□□□ -1.47
SYNCRIP-204ENST00000616122 PRUNE1Q86TP1 453 aa5.89□□□□□ -1.47
SYNCRIP-204ENST00000616122 TTC16Q8NEE8 873 aa5.89□□□□□ -1.47
SYNCRIP-204ENST00000616122 N4BP2L2Q92802 583 aaPredicted RBP5.89□□□□□ -1.47
SYNCRIP-204ENST00000616122 COPS5Q92905 334 aa5.89□□□□□ -1.47
SYNCRIP-204ENST00000616122 PAFAH2Q99487 392 aa5.89□□□□□ -1.47
SYNCRIP-204ENST00000616122 CYP3A43Q9HB55 503 aa5.89□□□□□ -1.47
SYNCRIP-204ENST00000616122 NOD2Q9HC29 1040 aa5.89□□□□□ -1.47
SYNCRIP-204ENST00000616122 CTNNAL1Q9UBT7 734 aa5.89□□□□□ -1.47
SYNCRIP-204ENST00000616122 MAGED2Q9UNF1 606 aaPredicted RBP5.89□□□□□ -1.47
SYNCRIP-204ENST00000616122 APOC4-APOC2K7ER74 178 aa5.89□□□□□ -1.47
SYNCRIP-204ENST00000616122 CXCL11O14625 94 aa5.89□□□□□ -1.47
SYNCRIP-204ENST00000616122 APOC2P02655 101 aa5.89□□□□□ -1.47
SYNCRIP-204ENST00000616122 COPS2P61201 443 aa5.89□□□□□ -1.47
SYNCRIP-204ENST00000616122 LAMC2Q13753 1193 aa5.89□□□□□ -1.47
SYNCRIP-204ENST00000616122 ZNF268Q14587 947 aaPredicted RBP5.89□□□□□ -1.47
SYNCRIP-204ENST00000616122 RABGAP1LQ5R372 815 aa5.89□□□□□ -1.47
SYNCRIP-204ENST00000616122 NLRP9Q7RTR0 991 aa5.89□□□□□ -1.47
SYNCRIP-204ENST00000616122 NSMCE1Q8WV22 266 aa5.89□□□□□ -1.47
SYNCRIP-204ENST00000616122 ART4Q93070 314 aa5.89□□□□□ -1.47
SYNCRIP-204ENST00000616122 NKD2Q969F2 451 aaPredicted RBP5.89□□□□□ -1.47
SYNCRIP-204ENST00000616122 FAM111AQ96PZ2 611 aa5.89□□□□□ -1.47
SYNCRIP-204ENST00000616122 TBCBQ99426 244 aa5.89□□□□□ -1.47
SYNCRIP-204ENST00000616122 MMP19Q99542 508 aa5.89□□□□□ -1.47
SYNCRIP-204ENST00000616122 ZFP69BQ9UJL9 534 aa5.89□□□□□ -1.47
SYNCRIP-204ENST00000616122 TLK1Q9UKI8 766 aa5.89□□□□□ -1.47
SYNCRIP-204ENST00000616122 G3BP2Q9UN86 482 aaKnown RBP5.89□□□□□ -1.47
SYNCRIP-204ENST00000616122 CACNA1GO43497 2377 aa5.89□□□□□ -1.47
SYNCRIP-204ENST00000616122 NFKBIEO00221 500 aa5.89□□□□□ -1.47
SYNCRIP-204ENST00000616122 ASPHQ12797 758 aa5.89□□□□□ -1.47
SYNCRIP-204ENST00000616122 TAF11Q15544 211 aa5.89□□□□□ -1.47
SYNCRIP-204ENST00000616122 CCDC124Q96CT7 223 aaKnown RBP5.89□□□□□ -1.47
SYNCRIP-204ENST00000616122 MED10Q9BTT4 135 aa5.89□□□□□ -1.47
SYNCRIP-204ENST00000616122 AP5M1Q9H0R1 490 aa5.89□□□□□ -1.47
SYNCRIP-204ENST00000616122 ABCF3Q9NUQ8 709 aa5.89□□□□□ -1.47
SYNCRIP-204ENST00000616122 B4GALT5O43286 388 aa5.89□□□□□ -1.47
SYNCRIP-204ENST00000616122 LPXNO60711 386 aa5.89□□□□□ -1.47
SYNCRIP-204ENST00000616122 LRCH4O75427 683 aa5.89□□□□□ -1.47
SYNCRIP-204ENST00000616122 MTA2O94776 668 aa5.89□□□□□ -1.47
SYNCRIP-204ENST00000616122 IL18RAPO95256 599 aa5.89□□□□□ -1.47
SYNCRIP-204ENST00000616122 STAMBPO95630 424 aa5.89□□□□□ -1.47
SYNCRIP-204ENST00000616122 PEX19P40855 299 aa5.89□□□□□ -1.47
SYNCRIP-204ENST00000616122 TNFSF9P41273 254 aa5.89□□□□□ -1.47
SYNCRIP-204ENST00000616122 PSMC4P43686 418 aa5.89□□□□□ -1.47
SYNCRIP-204ENST00000616122 EPHB1P54762 984 aa5.89□□□□□ -1.47
SYNCRIP-204ENST00000616122 PTK7Q13308 1070 aa5.89□□□□□ -1.47
SYNCRIP-204ENST00000616122 ATG16L1Q676U5 607 aa5.89□□□□□ -1.47
SYNCRIP-204ENST00000616122 CRLF3Q8IUI8 442 aa5.89□□□□□ -1.47
SYNCRIP-204ENST00000616122 CDKL3Q8IVW4 592 aaPredicted RBP5.89□□□□□ -1.47
SYNCRIP-204ENST00000616122 MTMR14Q8NCE2 650 aa5.89□□□□□ -1.47
SYNCRIP-204ENST00000616122 CENPTQ96BT3 561 aa5.89□□□□□ -1.47
SYNCRIP-204ENST00000616122 TLCD1Q96CP7 247 aa5.89□□□□□ -1.47
SYNCRIP-204ENST00000616122 AGAP3Q96P47 875 aa5.89□□□□□ -1.47
SYNCRIP-204ENST00000616122 ASCC2Q9H1I8 757 aaPredicted RBP5.89□□□□□ -1.47
SYNCRIP-204ENST00000616122 XAB2Q9HCS7 855 aaKnown RBP5.89□□□□□ -1.47
SYNCRIP-204ENST00000616122 UBN1Q9NPG3 1134 aa5.89□□□□□ -1.47
SYNCRIP-204ENST00000616122 METTL5Q9NRN9 209 aaKnown RBP5.89□□□□□ -1.47
SYNCRIP-204ENST00000616122 XPO7Q9UIA9 1087 aaKnown RBP5.89□□□□□ -1.47
SYNCRIP-204ENST00000616122 STXBP5LQ9Y2K9 1186 aa5.89□□□□□ -1.47
SYNCRIP-204ENST00000616122 GH1P01241 217 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms