RNA–Protein interactions for RNA: ENST00000616010.4

CCND3-223, Transcript of cyclin D3, humanhuman

TSL 5 BASIC

Gene CCND3, Length 2,047 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-223ENST00000616010 B3GALT6Q96L58 329 aa24.82■■□□□ 1.56
CCND3-223ENST00000616010 MYBPHLA2RUH7 354 aa24.81■■□□□ 1.56
CCND3-223ENST00000616010 MYBL1P10243 752 aa24.81■■□□□ 1.56
CCND3-223ENST00000616010 C1QBPQ07021 282 aaKnown RBP24.81■■□□□ 1.56
CCND3-223ENST00000616010 PTP4A2Q12974 167 aa24.81■■□□□ 1.56
CCND3-223ENST00000616010 PDCLQ13371 301 aa24.81■■□□□ 1.56
CCND3-223ENST00000616010 PTPN20Q4JDL3 420 aa24.81■■□□□ 1.56
CCND3-223ENST00000616010 PKDCCQ504Y2 493 aa24.81■■□□□ 1.56
CCND3-223ENST00000616010 INTS6LQ5JSJ4 861 aaKnown RBP24.81■■□□□ 1.56
CCND3-223ENST00000616010 HERVK_113Q902F9 699 aa24.81■■□□□ 1.56
CCND3-223ENST00000616010 CTTNBP2NLQ9P2B4 639 aa24.81■■□□□ 1.56
CCND3-223ENST00000616010 KIAA1671Q9BY89 1806 aa24.81■■□□□ 1.56
CCND3-223ENST00000616010 FANCGO15287 622 aa24.81■■□□□ 1.56
CCND3-223ENST00000616010 RRM1P23921 792 aa24.81■■□□□ 1.56
CCND3-223ENST00000616010 ELAVL2Q12926 359 aaKnown RBP24.81■■□□□ 1.56
CCND3-223ENST00000616010 VARS2Q5ST30 1063 aaKnown RBP24.81■■□□□ 1.56
CCND3-223ENST00000616010 LLGL2Q6P1M3 1020 aa24.81■■□□□ 1.56
CCND3-223ENST00000616010 KCNT2Q6UVM3 1135 aa24.81■■□□□ 1.56
CCND3-223ENST00000616010 PHLDB2Q86SQ0 1253 aa24.81■■□□□ 1.56
CCND3-223ENST00000616010 ERICH1Q86X53 443 aa24.81■■□□□ 1.56
CCND3-223ENST00000616010 RHOT2Q8IXI1 618 aa24.81■■□□□ 1.56
CCND3-223ENST00000616010 FUKQ8N0W3 1084 aa24.81■■□□□ 1.56
CCND3-223ENST00000616010 MYH10P35580 1976 aa24.8■■□□□ 1.56
CCND3-223ENST00000616010 CLDN5O00501 218 aa24.8■■□□□ 1.56
CCND3-223ENST00000616010 CYP1A2P05177 515 aa24.8■■□□□ 1.56
CCND3-223ENST00000616010 BCAT1P54687 386 aa24.8■■□□□ 1.56
CCND3-223ENST00000616010 TRIM58Q8NG06 486 aa24.8■■□□□ 1.56
CCND3-223ENST00000616010 MYCBPAPQ8TBZ2 947 aa24.8■■□□□ 1.56
CCND3-223ENST00000616010 PCED1BQ96HM7 432 aa24.8■■□□□ 1.56
CCND3-223ENST00000616010 VCPIP1Q96JH7 1222 aa24.8■■□□□ 1.56
CCND3-223ENST00000616010 ZNF558Q96NG5 402 aa24.8■■□□□ 1.56
CCND3-223ENST00000616010 ALS2CR12Q96Q35 445 aa24.8■■□□□ 1.56
CCND3-223ENST00000616010 TMEM209Q96SK2 561 aa24.8■■□□□ 1.56
CCND3-223ENST00000616010 CPXM1Q96SM3 734 aa24.8■■□□□ 1.56
CCND3-223ENST00000616010 HNRNPABQ99729 332 aaKnown RBP24.8■■□□□ 1.56
CCND3-223ENST00000616010 ZBED2Q9BTP6 218 aa24.8■■□□□ 1.56
CCND3-223ENST00000616010 MED10Q9BTT4 135 aa24.8■■□□□ 1.56
CCND3-223ENST00000616010 COG5Q9UP83 839 aa24.8■■□□□ 1.56
CCND3-223ENST00000616010 SLC4A7Q9Y6M7 1214 aa24.8■■□□□ 1.56
CCND3-223ENST00000616010 OAZ2O95190 189 aa24.79■■□□□ 1.56
CCND3-223ENST00000616010 TUBB4AP04350 444 aa24.79■■□□□ 1.56
CCND3-223ENST00000616010 CALB1P05937 261 aa24.79■■□□□ 1.56
CCND3-223ENST00000616010 TSPY1Q01534 308 aa24.79■■□□□ 1.56
CCND3-223ENST00000616010 LIN9Q5TKA1 542 aa24.79■■□□□ 1.56
CCND3-223ENST00000616010 ANKRD52Q8NB46 1076 aa24.79■■□□□ 1.56
CCND3-223ENST00000616010 IGSF21Q96ID5 467 aa24.79■■□□□ 1.56
CCND3-223ENST00000616010 NUP85Q9BW27 656 aa24.79■■□□□ 1.56
CCND3-223ENST00000616010 ST7Q9NRC1 585 aa24.79■■□□□ 1.56
CCND3-223ENST00000616010 TJP2Q9UDY2 1190 aa24.79■■□□□ 1.56
CCND3-223ENST00000616010 TULP2O00295 520 aa24.79■■□□□ 1.56
CCND3-223ENST00000616010 LAG3P18627 525 aa24.79■■□□□ 1.56
CCND3-223ENST00000616010 FGFR3P22607 806 aa24.79■■□□□ 1.56
CCND3-223ENST00000616010 PDE4CQ08493 712 aa24.79■■□□□ 1.56
CCND3-223ENST00000616010 BST2Q10589 180 aaKnown RBP24.79■■□□□ 1.56
CCND3-223ENST00000616010 CYP4A22Q5TCH4 519 aa24.79■■□□□ 1.56
CCND3-223ENST00000616010 SLC9A7Q96T83 725 aa24.79■■□□□ 1.56
CCND3-223ENST00000616010 B3GNT5Q9BYG0 378 aa24.79■■□□□ 1.56
CCND3-223ENST00000616010 SYNCQ9H7C4 482 aa24.79■■□□□ 1.56
CCND3-223ENST00000616010 LAMA2P24043 3122 aaKnown RBP24.79■■□□□ 1.56
CCND3-223ENST00000616010 HTRA4P83105 476 aaPredicted RBP24.78■■□□□ 1.56
CCND3-223ENST00000616010 IFI16Q16666 785 aaKnown RBP24.78■■□□□ 1.56
CCND3-223ENST00000616010 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.78■■□□□ 1.56
CCND3-223ENST00000616010 PAQR9Q6ZVX9 377 aa24.78■■□□□ 1.56
CCND3-223ENST00000616010 COLGALT1Q8NBJ5 622 aa24.78■■□□□ 1.56
CCND3-223ENST00000616010 MSANTD4Q8NCY6 345 aa24.78■■□□□ 1.56
CCND3-223ENST00000616010 MYLPFQ96A32 169 aa24.78■■□□□ 1.56
CCND3-223ENST00000616010 AVENQ9NQS1 362 aaPredicted RBP24.78■■□□□ 1.56
CCND3-223ENST00000616010 KRT82Q9NSB4 513 aa24.78■■□□□ 1.56
CCND3-223ENST00000616010 PLCB3Q01970 1234 aa24.78■■□□□ 1.56
CCND3-223ENST00000616010 RTP2Q5QGT7 225 aa24.78■■□□□ 1.56
CCND3-223ENST00000616010 FAM35AQ86V20 835 aa24.78■■□□□ 1.56
CCND3-223ENST00000616010 HERC6Q8IVU3 1022 aa24.78■■□□□ 1.56
CCND3-223ENST00000616010 TPCN2Q8NHX9 752 aa24.78■■□□□ 1.56
CCND3-223ENST00000616010 ZNF564Q8TBZ8 553 aaPredicted RBP24.78■■□□□ 1.56
CCND3-223ENST00000616010 PKMYT1Q99640 499 aa24.78■■□□□ 1.56
CCND3-223ENST00000616010 PCDHGC5Q9Y5F6 944 aa24.78■■□□□ 1.56
CCND3-223ENST00000616010 GRID2IPA4D2P6 1211 aa24.77■■□□□ 1.56
CCND3-223ENST00000616010 PALMO75781 387 aa24.77■■□□□ 1.56
CCND3-223ENST00000616010 ERBB2P04626 1255 aa24.77■■□□□ 1.56
CCND3-223ENST00000616010 SETSIPP0DME0 302 aa24.77■■□□□ 1.56
CCND3-223ENST00000616010 ATP2A2P16615 1042 aaKnown RBP24.77■■□□□ 1.56
CCND3-223ENST00000616010 RGS7P49802 495 aa24.77■■□□□ 1.56
CCND3-223ENST00000616010 ZNF280DQ6N043 979 aa24.77■■□□□ 1.56
CCND3-223ENST00000616010 PMF1Q6P1K2 205 aa24.77■■□□□ 1.56
CCND3-223ENST00000616010 FAM171BQ6P995 826 aa24.77■■□□□ 1.56
CCND3-223ENST00000616010 TAS1R1Q7RTX1 841 aa24.77■■□□□ 1.56
CCND3-223ENST00000616010 SLC39A11Q8N1S5 342 aa24.77■■□□□ 1.56
CCND3-223ENST00000616010 IPO4Q8TEX9 1081 aaKnown RBP24.77■■□□□ 1.56
CCND3-223ENST00000616010 SLC35F5Q8WV83 523 aa24.77■■□□□ 1.56
CCND3-223ENST00000616010 MTIF3Q9H2K0 278 aaKnown RBP24.77■■□□□ 1.56
CCND3-223ENST00000616010 TMLHEQ9NVH6 421 aa24.77■■□□□ 1.56
CCND3-223ENST00000616010 STRIP2Q9ULQ0 834 aa24.77■■□□□ 1.56
CCND3-223ENST00000616010 OR4Q2P0C623 313 aa24.76■■□□□ 1.55
CCND3-223ENST00000616010 CASQ1P31415 396 aa24.76■■□□□ 1.55
CCND3-223ENST00000616010 CTXN3Q4LDR2 81 aa24.76■■□□□ 1.55
CCND3-223ENST00000616010 LRRTM3Q86VH5 581 aa24.76■■□□□ 1.55
CCND3-223ENST00000616010 TMEM169Q96HH4 297 aa24.76■■□□□ 1.55
CCND3-223ENST00000616010 TTPALQ9BTX7 342 aa24.76■■□□□ 1.55
CCND3-223ENST00000616010 VN1R3Q9BXE9 311 aa24.76■■□□□ 1.55
CCND3-223ENST00000616010 DUSP16Q9BY84 665 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms