RNA–Protein interactions for RNA: ENST00000615732.1

COL4A1-205, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 5

Gene COL4A1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-205ENST00000615732 ADPGKQ9BRR6 497 aa11.5□□□□□ -0.57
COL4A1-205ENST00000615732 FAM213AQ9BRX8 229 aa11.5□□□□□ -0.57
COL4A1-205ENST00000615732 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.5□□□□□ -0.57
COL4A1-205ENST00000615732 MSTO1Q9BUK6 570 aa11.5□□□□□ -0.57
COL4A1-205ENST00000615732 RPP25Q9BUL9 199 aaKnown RBP11.5□□□□□ -0.57
COL4A1-205ENST00000615732 MRPL4Q9BYD3 311 aaKnown RBP11.5□□□□□ -0.57
COL4A1-205ENST00000615732 FOXQ1Q9C009 403 aa11.5□□□□□ -0.57
COL4A1-205ENST00000615732 CCDC113Q9H0I3 377 aa11.5□□□□□ -0.57
COL4A1-205ENST00000615732 GOLGA2P5Q9HBQ8 144 aa11.5□□□□□ -0.57
COL4A1-205ENST00000615732 SIX2Q9NPC8 291 aa11.5□□□□□ -0.57
COL4A1-205ENST00000615732 ARHGEF3Q9NR81 526 aa11.5□□□□□ -0.57
COL4A1-205ENST00000615732 ARHGAP20Q9P2F6 1191 aa11.5□□□□□ -0.57
COL4A1-205ENST00000615732 ANKFY1Q9P2R3 1169 aa11.5□□□□□ -0.57
COL4A1-205ENST00000615732 MYO1AQ9UBC5 1043 aa11.5□□□□□ -0.57
COL4A1-205ENST00000615732 REXO2Q9Y3B8 237 aaKnown RBP11.5□□□□□ -0.57
COL4A1-205ENST00000615732 BZW2Q9Y6E2 419 aaKnown RBP11.5□□□□□ -0.57
COL4A1-205ENST00000615732 EP300Q09472 2414 aaPredicted RBP11.5□□□□□ -0.57
COL4A1-205ENST00000615732 MTCL1Q9Y4B5 1905 aaKnown RBP11.5□□□□□ -0.57
COL4A1-205ENST00000615732 FANCMQ8IYD8 2048 aa11.5□□□□□ -0.57
COL4A1-205ENST00000615732 URI1O94763 535 aaPredicted RBP11.49□□□□□ -0.57
COL4A1-205ENST00000615732 LDHAP00338 332 aaKnown RBP11.49□□□□□ -0.57
COL4A1-205ENST00000615732 THP07101 528 aa11.49□□□□□ -0.57
COL4A1-205ENST00000615732 PLEKP08567 350 aaPredicted RBP11.49□□□□□ -0.57
COL4A1-205ENST00000615732 SP9P0CG40 484 aa11.49□□□□□ -0.57
COL4A1-205ENST00000615732 HARSP12081 509 aaKnown RBP11.49□□□□□ -0.57
COL4A1-205ENST00000615732 LAMP2P13473 410 aa11.49□□□□□ -0.57
COL4A1-205ENST00000615732 GLULP15104 373 aa11.49□□□□□ -0.57
COL4A1-205ENST00000615732 FERP16591 822 aa11.49□□□□□ -0.57
COL4A1-205ENST00000615732 GTF2H1P32780 548 aa11.49□□□□□ -0.57
COL4A1-205ENST00000615732 DLG4P78352 724 aa11.49□□□□□ -0.57
COL4A1-205ENST00000615732 KIF5AQ12840 1032 aa11.49□□□□□ -0.57
COL4A1-205ENST00000615732 PPM1LQ5SGD2 360 aa11.49□□□□□ -0.57
COL4A1-205ENST00000615732 PHLDB3Q6NSJ2 640 aa11.49□□□□□ -0.57
COL4A1-205ENST00000615732 PARM1Q6UWI2 310 aa11.49□□□□□ -0.57
COL4A1-205ENST00000615732 CEP120Q8N960 986 aa11.49□□□□□ -0.57
COL4A1-205ENST00000615732 LNX1Q8TBB1 728 aaPredicted RBP11.49□□□□□ -0.57
COL4A1-205ENST00000615732 HDAC7Q8WUI4 952 aa11.49□□□□□ -0.57
COL4A1-205ENST00000615732 ING5Q8WYH8 240 aa11.49□□□□□ -0.57
COL4A1-205ENST00000615732 PIK3R5Q8WYR1 880 aa11.49□□□□□ -0.57
COL4A1-205ENST00000615732 FGF14Q92915 247 aa11.49□□□□□ -0.57
COL4A1-205ENST00000615732 NXPE3Q969Y0 559 aa11.49□□□□□ -0.57
COL4A1-205ENST00000615732 FNBP1Q96RU3 617 aa11.49□□□□□ -0.57
COL4A1-205ENST00000615732 CLSTN3Q9BQT9 956 aa11.49□□□□□ -0.57
COL4A1-205ENST00000615732 TARS2Q9BW92 718 aaKnown RBP11.49□□□□□ -0.57
COL4A1-205ENST00000615732 SEMA4AQ9H3S1 761 aa11.49□□□□□ -0.57
COL4A1-205ENST00000615732 TMEM8AQ9HCN3 771 aa11.49□□□□□ -0.57
COL4A1-205ENST00000615732 HCFC1R1Q9NWW0 138 aa11.49□□□□□ -0.57
COL4A1-205ENST00000615732 AIPL1Q9NZN9 384 aa11.49□□□□□ -0.57
COL4A1-205ENST00000615732 APEX2Q9UBZ4 518 aa11.49□□□□□ -0.57
COL4A1-205ENST00000615732 DNAJC12Q9UKB3 198 aa11.49□□□□□ -0.57
COL4A1-205ENST00000615732 AGO2Q9UKV8 859 aaKnown RBP11.49□□□□□ -0.57
COL4A1-205ENST00000615732 GUCA1BQ9UMX6 200 aa11.49□□□□□ -0.57
COL4A1-205ENST00000615732 PCDHA13Q9Y5I0 950 aa11.49□□□□□ -0.57
COL4A1-205ENST00000615732 LRRIQ3A6PVS8 624 aaPredicted RBP11.48□□□□□ -0.57
COL4A1-205ENST00000615732 ACKR2O00590 384 aa11.48□□□□□ -0.57
COL4A1-205ENST00000615732 PMM2O15305 246 aa11.48□□□□□ -0.57
COL4A1-205ENST00000615732 LRRN2O75325 713 aa11.48□□□□□ -0.57
COL4A1-205ENST00000615732 DLATP10515 647 aaKnown RBP11.48□□□□□ -0.57
COL4A1-205ENST00000615732 ANXA13P27216 316 aa11.48□□□□□ -0.57
COL4A1-205ENST00000615732 TKTP29401 623 aaKnown RBP11.48□□□□□ -0.57
COL4A1-205ENST00000615732 ARHGAP25P42331 645 aa11.48□□□□□ -0.57
COL4A1-205ENST00000615732 MAGEA1P43355 309 aa11.48□□□□□ -0.57
COL4A1-205ENST00000615732 OSTNP61366 133 aa11.48□□□□□ -0.57
COL4A1-205ENST00000615732 CYP27A1Q02318 531 aa11.48□□□□□ -0.57
COL4A1-205ENST00000615732 PPP3CAQ08209 521 aa11.48□□□□□ -0.57
COL4A1-205ENST00000615732 KRT39Q6A163 491 aa11.48□□□□□ -0.57
COL4A1-205ENST00000615732 GJB7Q6PEY0 223 aa11.48□□□□□ -0.57
COL4A1-205ENST00000615732 DCLRE1AQ6PJP8 1040 aa11.48□□□□□ -0.57
COL4A1-205ENST00000615732 RSPO2Q6UXX9 243 aaPredicted RBP11.48□□□□□ -0.57
COL4A1-205ENST00000615732 ZPBP2Q6X784 338 aa11.48□□□□□ -0.57
COL4A1-205ENST00000615732 ZNF662Q6ZS27 426 aa11.48□□□□□ -0.57
COL4A1-205ENST00000615732 C3orf58Q8NDZ4 430 aa11.48□□□□□ -0.57
COL4A1-205ENST00000615732 ZSWIM2Q8NEG5 633 aa11.48□□□□□ -0.57
COL4A1-205ENST00000615732 PJA1Q8NG27 643 aa11.48□□□□□ -0.57
COL4A1-205ENST00000615732 ITFG1Q8TB96 612 aa11.48□□□□□ -0.57
COL4A1-205ENST00000615732 KXD1Q9BQD3 176 aa11.48□□□□□ -0.57
COL4A1-205ENST00000615732 STK33Q9BYT3 514 aa11.48□□□□□ -0.57
COL4A1-205ENST00000615732 SLC2A4RGQ9NR83 387 aa11.48□□□□□ -0.57
COL4A1-205ENST00000615732 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.48□□□□□ -0.57
COL4A1-205ENST00000615732 SIT1Q9Y3P8 196 aa11.48□□□□□ -0.57
COL4A1-205ENST00000615732 PATJQ8NI35 1801 aa11.48□□□□□ -0.57
COL4A1-205ENST00000615732 OTOGLQ3ZCN5 2332 aa11.48□□□□□ -0.57
COL4A1-205ENST00000615732 A0A0U1RQJ8 604 aa11.47□□□□□ -0.57
COL4A1-205ENST00000615732 CTAGE9A4FU28 777 aa11.47□□□□□ -0.57
COL4A1-205ENST00000615732 B3GAT3O94766 335 aa11.47□□□□□ -0.57
COL4A1-205ENST00000615732 GFPT2O94808 682 aa11.47□□□□□ -0.57
COL4A1-205ENST00000615732 CLSTN1O94985 981 aa11.47□□□□□ -0.57
COL4A1-205ENST00000615732 C1RP00736 705 aa11.47□□□□□ -0.57
COL4A1-205ENST00000615732 OR1D2P34982 312 aa11.47□□□□□ -0.57
COL4A1-205ENST00000615732 SOX5P35711 763 aa11.47□□□□□ -0.57
COL4A1-205ENST00000615732 BRCC3P46736 316 aa11.47□□□□□ -0.57
COL4A1-205ENST00000615732 CLCNKBP51801 687 aa11.47□□□□□ -0.57
COL4A1-205ENST00000615732 JAM2P57087 298 aa11.47□□□□□ -0.57
COL4A1-205ENST00000615732 GFPT1Q06210 699 aaPredicted RBP11.47□□□□□ -0.57
COL4A1-205ENST00000615732 ELAVL2Q12926 359 aaKnown RBP11.47□□□□□ -0.57
COL4A1-205ENST00000615732 DRAP1Q14919 205 aaPredicted RBP11.47□□□□□ -0.57
COL4A1-205ENST00000615732 PSMD6Q15008 389 aa11.47□□□□□ -0.57
COL4A1-205ENST00000615732 ARHGAP44Q17R89 818 aa11.47□□□□□ -0.57
COL4A1-205ENST00000615732 DCAF4L1Q3SXM0 396 aa11.47□□□□□ -0.57
COL4A1-205ENST00000615732 ATF7IP2Q5U623 682 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms