RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 TKTL1P51854 596 aa9.86□□□□□ -0.83
CLTCL1-208ENST00000615606 CAPSQ13938 189 aa9.86□□□□□ -0.83
CLTCL1-208ENST00000615606 SPARCL1Q14515 664 aa9.86□□□□□ -0.83
CLTCL1-208ENST00000615606 ZKSCAN8Q15776 578 aaPredicted RBP9.86□□□□□ -0.83
CLTCL1-208ENST00000615606 NBPF20Q3BBV1 942 aa9.86□□□□□ -0.83
CLTCL1-208ENST00000615606 GPR20Q99678 358 aa9.86□□□□□ -0.83
CLTCL1-208ENST00000615606 TSSK1BQ9BXA7 367 aa9.86□□□□□ -0.83
CLTCL1-208ENST00000615606 NDFIP2Q9NV92 336 aa9.86□□□□□ -0.83
CLTCL1-208ENST00000615606 SMIM35A0A1B0GVV1 85 aa9.86□□□□□ -0.83
CLTCL1-208ENST00000615606 LRRIQ3A6PVS8 624 aaPredicted RBP9.86□□□□□ -0.83
CLTCL1-208ENST00000615606 CTIFO43310 598 aaKnown RBP9.86□□□□□ -0.83
CLTCL1-208ENST00000615606 PPP1R11O60927 126 aaPredicted RBP9.86□□□□□ -0.83
CLTCL1-208ENST00000615606 ETFBP38117 255 aa9.86□□□□□ -0.83
CLTCL1-208ENST00000615606 PMS1P54277 932 aaKnown RBP9.86□□□□□ -0.83
CLTCL1-208ENST00000615606 PTENP60484 403 aa9.86□□□□□ -0.83
CLTCL1-208ENST00000615606 ZDHHC17Q8IUH5 632 aa9.86□□□□□ -0.83
CLTCL1-208ENST00000615606 HERC6Q8IVU3 1022 aa9.86□□□□□ -0.83
CLTCL1-208ENST00000615606 TMEM161BQ8NDZ6 487 aa9.86□□□□□ -0.83
CLTCL1-208ENST00000615606 TATDN2Q93075 761 aa9.86□□□□□ -0.83
CLTCL1-208ENST00000615606 ZNF558Q96NG5 402 aa9.86□□□□□ -0.83
CLTCL1-208ENST00000615606 DNAJC18Q9H819 358 aa9.86□□□□□ -0.83
CLTCL1-208ENST00000615606 ZFATQ9P243 1243 aa9.86□□□□□ -0.83
CLTCL1-208ENST00000615606 FIS1Q9Y3D6 152 aa9.86□□□□□ -0.83
CLTCL1-208ENST00000615606 TIMM13Q9Y5L4 95 aaPredicted RBP9.86□□□□□ -0.83
CLTCL1-208ENST00000615606 CNTNAP2Q9UHC6 1331 aa9.86□□□□□ -0.83
CLTCL1-208ENST00000615606 SLC12A8A0AV02 714 aa9.86□□□□□ -0.83
CLTCL1-208ENST00000615606 NOL3O60936 208 aaKnown RBP9.86□□□□□ -0.83
CLTCL1-208ENST00000615606 XYLBO75191 536 aa9.86□□□□□ -0.83
CLTCL1-208ENST00000615606 HSPA4LO95757 839 aa9.86□□□□□ -0.83
CLTCL1-208ENST00000615606 ICAM3P32942 547 aa9.86□□□□□ -0.83
CLTCL1-208ENST00000615606 COPS2P61201 443 aa9.86□□□□□ -0.83
CLTCL1-208ENST00000615606 IRX4P78413 519 aa9.86□□□□□ -0.83
CLTCL1-208ENST00000615606 C1QBPQ07021 282 aaKnown RBP9.86□□□□□ -0.83
CLTCL1-208ENST00000615606 EFEMP1Q12805 493 aa9.86□□□□□ -0.83
CLTCL1-208ENST00000615606 SFSWAPQ12872 951 aaKnown RBP9.86□□□□□ -0.83
CLTCL1-208ENST00000615606 ABHD15Q6UXT9 468 aa9.86□□□□□ -0.83
CLTCL1-208ENST00000615606 NECAB2Q7Z6G3 386 aa9.86□□□□□ -0.83
CLTCL1-208ENST00000615606 KIAA0319LQ8IZA0 1049 aa9.86□□□□□ -0.83
CLTCL1-208ENST00000615606 TPCN2Q8NHX9 752 aa9.86□□□□□ -0.83
CLTCL1-208ENST00000615606 RIN2Q8WYP3 895 aaPredicted RBP9.86□□□□□ -0.83
CLTCL1-208ENST00000615606 USP13Q92995 863 aaPredicted RBP9.86□□□□□ -0.83
CLTCL1-208ENST00000615606 CARD9Q9H257 536 aa9.86□□□□□ -0.83
CLTCL1-208ENST00000615606 DMAP1Q9NPF5 467 aaPredicted RBP9.86□□□□□ -0.83
CLTCL1-208ENST00000615606 OLA1Q9NTK5 396 aaKnown RBP9.86□□□□□ -0.83
CLTCL1-208ENST00000615606 BAG5Q9UL15 447 aa9.86□□□□□ -0.83
CLTCL1-208ENST00000615606 SLC45A1Q9Y2W3 748 aa9.86□□□□□ -0.83
CLTCL1-208ENST00000615606 SLC30A1Q9Y6M5 507 aa9.86□□□□□ -0.83
CLTCL1-208ENST00000615606 ESYT3A0FGR9 886 aa9.86□□□□□ -0.83
CLTCL1-208ENST00000615606 TOMM70O94826 608 aa9.86□□□□□ -0.83
CLTCL1-208ENST00000615606 AMPD2Q01433 879 aa9.86□□□□□ -0.83
CLTCL1-208ENST00000615606 ITGA7Q13683 1181 aa9.86□□□□□ -0.83
CLTCL1-208ENST00000615606 UGP2Q16851 508 aa9.86□□□□□ -0.83
CLTCL1-208ENST00000615606 CLEC16AQ2KHT3 1053 aa9.86□□□□□ -0.83
CLTCL1-208ENST00000615606 SLFN11Q7Z7L1 901 aa9.86□□□□□ -0.83
CLTCL1-208ENST00000615606 LMNTD2Q8IXW0 634 aa9.86□□□□□ -0.83
CLTCL1-208ENST00000615606 CHMP6Q96FZ7 201 aa9.86□□□□□ -0.83
CLTCL1-208ENST00000615606 MAML3Q96JK9 1138 aa9.86□□□□□ -0.83
CLTCL1-208ENST00000615606 TSPAN18Q96SJ8 248 aa9.86□□□□□ -0.83
CLTCL1-208ENST00000615606 CINPQ9BW66 212 aaPredicted RBP9.86□□□□□ -0.83
CLTCL1-208ENST00000615606 UXTQ9UBK9 157 aaPredicted RBP9.86□□□□□ -0.83
CLTCL1-208ENST00000615606 MSRAQ9UJ68 235 aa9.86□□□□□ -0.83
CLTCL1-208ENST00000615606 TPX2Q9ULW0 747 aaKnown RBP9.86□□□□□ -0.83
CLTCL1-208ENST00000615606 TLR2O60603 784 aa9.85□□□□□ -0.83
CLTCL1-208ENST00000615606 RTN3O95197 1032 aaPredicted RBP9.85□□□□□ -0.83
CLTCL1-208ENST00000615606 GNRH1P01148 92 aa9.85□□□□□ -0.83
CLTCL1-208ENST00000615606 SH3D19Q5HYK7 790 aa9.85□□□□□ -0.83
CLTCL1-208ENST00000615606 RAB42Q8N4Z0 105 aa9.85□□□□□ -0.83
CLTCL1-208ENST00000615606 FAM172AQ8WUF8 416 aa9.85□□□□□ -0.83
CLTCL1-208ENST00000615606 PBXIP1Q96AQ6 731 aa9.85□□□□□ -0.83
CLTCL1-208ENST00000615606 DUSP9Q99956 384 aaKnown RBP9.85□□□□□ -0.83
CLTCL1-208ENST00000615606 DRC3Q9H069 523 aa9.85□□□□□ -0.83
CLTCL1-208ENST00000615606 CHST12Q9NRB3 414 aa9.85□□□□□ -0.83
CLTCL1-208ENST00000615606 TSPAN16Q9UKR8 245 aa9.85□□□□□ -0.83
CLTCL1-208ENST00000615606 DNAJC6O75061 913 aa9.85□□□□□ -0.83
CLTCL1-208ENST00000615606 EFCAB14O75071 495 aa9.85□□□□□ -0.83
CLTCL1-208ENST00000615606 HSPA8P11142 646 aaKnown RBP9.85□□□□□ -0.83
CLTCL1-208ENST00000615606 SCNN1GP51170 649 aa9.85□□□□□ -0.83
CLTCL1-208ENST00000615606 CREMQ03060 361 aa9.85□□□□□ -0.83
CLTCL1-208ENST00000615606 TWF1Q12792 350 aa9.85□□□□□ -0.83
CLTCL1-208ENST00000615606 SLC47A2Q86VL8 602 aa9.85□□□□□ -0.83
CLTCL1-208ENST00000615606 UNC45BQ8IWX7 931 aa9.85□□□□□ -0.83
CLTCL1-208ENST00000615606 ACO2Q99798 780 aaKnown RBP9.85□□□□□ -0.83
CLTCL1-208ENST00000615606 ZSWIM1Q9BR11 485 aa9.85□□□□□ -0.83
CLTCL1-208ENST00000615606 IRX2Q9BZI1 471 aaPredicted RBP9.85□□□□□ -0.83
CLTCL1-208ENST00000615606 TRIM10Q9UDY6 481 aa9.85□□□□□ -0.83
CLTCL1-208ENST00000615606 USP20Q9Y2K6 914 aa9.85□□□□□ -0.83
CLTCL1-208ENST00000615606 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.85□□□□□ -0.83
CLTCL1-208ENST00000615606 WDR91A4D1P6 747 aa9.85□□□□□ -0.83
CLTCL1-208ENST00000615606 MYL4P12829 197 aa9.85□□□□□ -0.83
CLTCL1-208ENST00000615606 MLH1P40692 756 aa9.85□□□□□ -0.83
CLTCL1-208ENST00000615606 CCL23P55773 120 aa9.85□□□□□ -0.83
CLTCL1-208ENST00000615606 STAT4Q14765 748 aa9.85□□□□□ -0.83
CLTCL1-208ENST00000615606 HYIQ5T013 277 aa9.85□□□□□ -0.83
CLTCL1-208ENST00000615606 NAPEPLDQ6IQ20 393 aa9.85□□□□□ -0.83
CLTCL1-208ENST00000615606 KDELC2Q7Z4H8 507 aa9.85□□□□□ -0.83
CLTCL1-208ENST00000615606 CRLF3Q8IUI8 442 aa9.85□□□□□ -0.83
CLTCL1-208ENST00000615606 TFB1MQ8WVM0 346 aaKnown RBP9.85□□□□□ -0.83
CLTCL1-208ENST00000615606 TTC17Q96AE7 1141 aa9.85□□□□□ -0.83
CLTCL1-208ENST00000615606 ULK4Q96C45 1275 aa9.85□□□□□ -0.83
CLTCL1-208ENST00000615606 SENP8Q96LD8 212 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms