RNA–Protein interactions for RNA: ENST00000615517.4

MUC1-227, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 951 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-227ENST00000615517 PNMA5Q96PV4 448 aa7.48□□□□□ -1.21
MUC1-227ENST00000615517 SLC22A12Q96S37 553 aa7.48□□□□□ -1.21
MUC1-227ENST00000615517 SEPT5Q99719 369 aaPredicted RBP7.48□□□□□ -1.21
MUC1-227ENST00000615517 EIF2AK1Q9BQI3 630 aaKnown RBP7.48□□□□□ -1.21
MUC1-227ENST00000615517 KIFC3Q9BVG8 833 aa7.48□□□□□ -1.21
MUC1-227ENST00000615517 SLC26A6Q9BXS9 759 aa7.48□□□□□ -1.21
MUC1-227ENST00000615517 C22orf23Q9BZE7 217 aa7.48□□□□□ -1.21
MUC1-227ENST00000615517 C2orf40Q9H1Z8 148 aa7.48□□□□□ -1.21
MUC1-227ENST00000615517 CDT1Q9H211 546 aa7.48□□□□□ -1.21
MUC1-227ENST00000615517 CNTN3Q9P232 1028 aa7.48□□□□□ -1.21
MUC1-227ENST00000615517 BCCIPQ9P287 314 aaKnown RBP eCLIP7.48□□□□□ -1.21
MUC1-227ENST00000615517 TUBGCP4Q9UGJ1 667 aa7.48□□□□□ -1.21
MUC1-227ENST00000615517 NAP1L2Q9ULW6 460 aaPredicted RBP7.48□□□□□ -1.21
MUC1-227ENST00000615517 USP9YO00507 2555 aaPredicted RBP7.48□□□□□ -1.21
MUC1-227ENST00000615517 IGHV1OR15-9A0A0B4J2B8 117 aa7.47□□□□□ -1.21
MUC1-227ENST00000615517 E9PAM4 449 aa7.47□□□□□ -1.21
MUC1-227ENST00000615517 TADA3O75528 432 aa7.47□□□□□ -1.21
MUC1-227ENST00000615517 KRT10P13645 584 aa7.47□□□□□ -1.21
MUC1-227ENST00000615517 HLA-EP13747 358 aa7.47□□□□□ -1.21
MUC1-227ENST00000615517 GABRG2P18507 467 aa7.47□□□□□ -1.21
MUC1-227ENST00000615517 MAOBP27338 520 aa7.47□□□□□ -1.21
MUC1-227ENST00000615517 KIR2DL1P43626 348 aaPredicted RBP7.47□□□□□ -1.21
MUC1-227ENST00000615517 SLC6A11P48066 632 aa7.47□□□□□ -1.21
MUC1-227ENST00000615517 IFNAR2P48551 515 aa7.47□□□□□ -1.21
MUC1-227ENST00000615517 AARSP49588 968 aaKnown RBP eCLIP7.47□□□□□ -1.21
MUC1-227ENST00000615517 YARSP54577 528 aaKnown RBP7.47□□□□□ -1.21
MUC1-227ENST00000615517 CLDN6P56747 220 aa7.47□□□□□ -1.21
MUC1-227ENST00000615517 BNC1Q01954 994 aa7.47□□□□□ -1.21
MUC1-227ENST00000615517 USP4Q13107 963 aa7.47□□□□□ -1.21
MUC1-227ENST00000615517 BYSLQ13895 437 aaKnown RBP7.47□□□□□ -1.21
MUC1-227ENST00000615517 LY6DQ14210 128 aa7.47□□□□□ -1.21
MUC1-227ENST00000615517 MYBPC2Q14324 1141 aa7.47□□□□□ -1.21
MUC1-227ENST00000615517 PPP4R3AQ6IN85 833 aa7.47□□□□□ -1.21
MUC1-227ENST00000615517 SLC36A4Q6YBV0 504 aa7.47□□□□□ -1.21
MUC1-227ENST00000615517 LRRC69Q6ZNQ3 347 aa7.47□□□□□ -1.21
MUC1-227ENST00000615517 MON1AQ86VX9 555 aa7.47□□□□□ -1.21
MUC1-227ENST00000615517 EFCAB13Q8IY85 973 aa7.47□□□□□ -1.21
MUC1-227ENST00000615517 BLIDQ8IZY5 108 aa7.47□□□□□ -1.21
MUC1-227ENST00000615517 PGBD3Q8N328 593 aa7.47□□□□□ -1.21
MUC1-227ENST00000615517 SPRYD3Q8NCJ5 442 aa7.47□□□□□ -1.21
MUC1-227ENST00000615517 OR10T2Q8NGX3 314 aa7.47□□□□□ -1.21
MUC1-227ENST00000615517 ATP2A3Q93084 1043 aa7.47□□□□□ -1.21
MUC1-227ENST00000615517 HSPA12BQ96MM6 686 aa7.47□□□□□ -1.21
MUC1-227ENST00000615517 ACAP3Q96P50 834 aa7.47□□□□□ -1.21
MUC1-227ENST00000615517 GCNAQ96QF7 691 aa7.47□□□□□ -1.21
MUC1-227ENST00000615517 CYP2S1Q96SQ9 504 aa7.47□□□□□ -1.21
MUC1-227ENST00000615517 PI4K2AQ9BTU6 479 aa7.47□□□□□ -1.21
MUC1-227ENST00000615517 CCDC94Q9BW85 323 aaPredicted RBP7.47□□□□□ -1.21
MUC1-227ENST00000615517 RNF26Q9BY78 433 aaPredicted RBP7.47□□□□□ -1.21
MUC1-227ENST00000615517 POLD4Q9HCU8 107 aa7.47□□□□□ -1.21
MUC1-227ENST00000615517 PTPRHQ9HD43 1115 aa7.47□□□□□ -1.21
MUC1-227ENST00000615517 CD93Q9NPY3 652 aa7.47□□□□□ -1.21
MUC1-227ENST00000615517 SH3GLB2Q9NR46 395 aa7.47□□□□□ -1.21
MUC1-227ENST00000615517 TOPORSQ9NS56 1045 aaPredicted RBP7.47□□□□□ -1.21
MUC1-227ENST00000615517 HSFX1Q9UBD0 423 aa7.47□□□□□ -1.21
MUC1-227ENST00000615517 ZMYM5Q9UJ78 669 aa7.47□□□□□ -1.21
MUC1-227ENST00000615517 TNFSF13BQ9Y275 285 aa7.47□□□□□ -1.21
MUC1-227ENST00000615517 BTBD3Q9Y2F9 522 aa7.47□□□□□ -1.21
MUC1-227ENST00000615517 FNDC3AQ9Y2H6 1198 aaKnown RBP7.47□□□□□ -1.21
MUC1-227ENST00000615517 CACNA1DQ01668 2161 aa7.47□□□□□ -1.21
MUC1-227ENST00000615517 TLN1Q9Y490 2541 aaKnown RBP7.47□□□□□ -1.21
MUC1-227ENST00000615517 NBASA2RRP1 2371 aa7.47□□□□□ -1.21
MUC1-227ENST00000615517 RELNP78509 3460 aa7.47□□□□□ -1.21
MUC1-227ENST00000615517 CCDC196A0A1B0GTZ2 297 aa7.46□□□□□ -1.22
MUC1-227ENST00000615517 ABLIM1O14639 778 aa7.46□□□□□ -1.22
MUC1-227ENST00000615517 SLC28A2O43868 658 aa7.46□□□□□ -1.22
MUC1-227ENST00000615517 NTRK1P04629 796 aa7.46□□□□□ -1.22
MUC1-227ENST00000615517 CPA1P15085 419 aa7.46□□□□□ -1.22
MUC1-227ENST00000615517 DDX6P26196 483 aaKnown RBP eCLIP7.46□□□□□ -1.22
MUC1-227ENST00000615517 HSPA4P34932 840 aa7.46□□□□□ -1.22
MUC1-227ENST00000615517 CSRP3P50461 194 aa7.46□□□□□ -1.22
MUC1-227ENST00000615517 CXADRP78310 365 aa7.46□□□□□ -1.22
MUC1-227ENST00000615517 SEMG2Q02383 582 aa7.46□□□□□ -1.22
MUC1-227ENST00000615517 TLE3Q04726 772 aa7.46□□□□□ -1.22
MUC1-227ENST00000615517 FAM160A1Q05DH4 1040 aa7.46□□□□□ -1.22
MUC1-227ENST00000615517 PTPRNQ16849 979 aa7.46□□□□□ -1.22
MUC1-227ENST00000615517 MGAT5BQ3V5L5 792 aa7.46□□□□□ -1.22
MUC1-227ENST00000615517 ZC2HC1CQ53FD0 456 aaPredicted RBP7.46□□□□□ -1.22
MUC1-227ENST00000615517 TAF1BQ53T94 588 aaPredicted RBP7.46□□□□□ -1.22
MUC1-227ENST00000615517 OVOS1Q6IE37 1185 aa7.46□□□□□ -1.22
MUC1-227ENST00000615517 DHRS13Q6UX07 377 aa7.46□□□□□ -1.22
MUC1-227ENST00000615517 C12orf40Q86WS4 652 aa7.46□□□□□ -1.22
MUC1-227ENST00000615517 TTC16Q8NEE8 873 aa7.46□□□□□ -1.22
MUC1-227ENST00000615517 DEPTORQ8TB45 409 aa7.46□□□□□ -1.22
MUC1-227ENST00000615517 RHBDD1Q8TEB9 315 aa7.46□□□□□ -1.22
MUC1-227ENST00000615517 LRRC15Q8TF66 581 aa7.46□□□□□ -1.22
MUC1-227ENST00000615517 WBP1Q96G27 269 aa7.46□□□□□ -1.22
MUC1-227ENST00000615517 ZNF419Q96HQ0 510 aaPredicted RBP7.46□□□□□ -1.22
MUC1-227ENST00000615517 KIF2CQ99661 725 aa7.46□□□□□ -1.22
MUC1-227ENST00000615517 OXCT2Q9BYC2 517 aaPredicted RBP7.46□□□□□ -1.22
MUC1-227ENST00000615517 RWDD1Q9H446 243 aaPredicted RBP7.46□□□□□ -1.22
MUC1-227ENST00000615517 GAREM1Q9H706 876 aa7.46□□□□□ -1.22
MUC1-227ENST00000615517 TM7SF3Q9NS93 570 aa7.46□□□□□ -1.22
MUC1-227ENST00000615517 CALCOCO1Q9P1Z2 691 aa7.46□□□□□ -1.22
MUC1-227ENST00000615517 HCN2Q9UL51 889 aa7.46□□□□□ -1.22
MUC1-227ENST00000615517 SPTBN1Q01082 2364 aaKnown RBP7.46□□□□□ -1.22
MUC1-227ENST00000615517 A0A0A0MRY4 1105 aa7.45□□□□□ -1.22
MUC1-227ENST00000615517 PPEF2O14830 753 aa7.45□□□□□ -1.22
MUC1-227ENST00000615517 RRP8O43159 456 aaKnown RBP7.45□□□□□ -1.22
MUC1-227ENST00000615517 CCNT1O60563 726 aaKnown RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 127.5 ms