RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 CALB1P05937 261 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 ZSCAN5DPP0CG00 497 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 MYBL1P10243 752 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 VDRP11473 427 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 ETS1P14921 441 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 TFE3P19532 575 aaPredicted RBP3.63□□□□□ -1.83
LIG4-205ENST00000614526 MCM3P25205 808 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 IL1R2P27930 398 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 ATICP31939 592 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 VEGFBP49765 207 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 CLCNKBP51801 687 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 ATXN1P54253 815 aaKnown RBP3.63□□□□□ -1.83
LIG4-205ENST00000614526 ATN1P54259 1190 aaPredicted RBP3.63□□□□□ -1.83
LIG4-205ENST00000614526 EPHB4P54760 987 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 NRLP54845 237 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 HADHBP55084 474 aaKnown RBP3.63□□□□□ -1.83
LIG4-205ENST00000614526 ITIH3Q06033 890 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 IFRD2Q12894 506 aaPredicted RBP3.63□□□□□ -1.83
LIG4-205ENST00000614526 PAK2Q13177 524 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 TAF2Q6P1X5 1199 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 FAM183BPQ6ZVS7 135 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 GSTA5Q7RTV2 222 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 RSPH3Q86UC2 560 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 RHOT1Q8IXI2 618 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 ARFGAP1Q8N6T3 406 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 FBXO25Q8TCJ0 367 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 SLC2A14Q8TDB8 520 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 TRIM11Q96F44 468 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 CFAP57Q96MR6 1250 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 ADAM2Q99965 735 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 CALN1Q9BXU9 219 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 RHOBTB2Q9BYZ6 727 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 AVENQ9NQS1 362 aaPredicted RBP3.63□□□□□ -1.83
LIG4-205ENST00000614526 FAM105AQ9NUU6 356 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 SRRDQ9UH36 339 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 ASIC3Q9UHC3 531 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 MTUS1Q9ULD2 1270 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 TTC7AQ9ULT0 858 aaPredicted RBP3.63□□□□□ -1.83
LIG4-205ENST00000614526 UBQLN1Q9UMX0 589 aaKnown RBP3.63□□□□□ -1.83
LIG4-205ENST00000614526 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.63□□□□□ -1.83
LIG4-205ENST00000614526 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.63□□□□□ -1.83
LIG4-205ENST00000614526 TRPV2Q9Y5S1 764 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 SCINQ9Y6U3 715 aa3.63□□□□□ -1.83
LIG4-205ENST00000614526 CCDC188H7C350 402 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 AGPSO00116 658 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 CYB561D2O14569 222 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 HUS1O60921 280 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 B3GAT3O94766 335 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 ALDH1A1P00352 501 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 PDGFRAP16234 1089 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 COILP38432 576 aaPredicted RBP3.62□□□□□ -1.83
LIG4-205ENST00000614526 BRCC3P46736 316 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 ACLYP53396 1101 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 LILRA4P59901 499 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 CDC42EP1Q00587 391 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 DHX9Q08211 1270 aaKnown RBP3.62□□□□□ -1.83
LIG4-205ENST00000614526 MMRN1Q13201 1228 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 ZBTB6Q15916 424 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 CNGA2Q16280 664 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 GLE1Q53GS7 698 aaKnown RBP3.62□□□□□ -1.83
LIG4-205ENST00000614526 TRNP1Q6NT89 227 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 ALKAL1Q6UXT8 129 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 OSTM1Q86WC4 334 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 XYLT1Q86Y38 959 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 SH2D3CQ8N5H7 860 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 GLIS1Q8NBF1 620 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 C3orf58Q8NDZ4 430 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 APPL2Q8NEU8 664 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 RXFP2Q8WXD0 754 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 ARL8AQ96BM9 186 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 FAM149B1Q96BN6 582 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 CALR3Q96L12 384 aaKnown RBP3.62□□□□□ -1.83
LIG4-205ENST00000614526 ZIM3Q96PE6 472 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 RUFY1Q96T51 708 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 NAP1L3Q99457 506 aaPredicted RBP3.62□□□□□ -1.83
LIG4-205ENST00000614526 MED10Q9BTT4 135 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 OSBPL8Q9BZF1 889 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 TSPYL2Q9H2G4 693 aaPredicted RBP3.62□□□□□ -1.83
LIG4-205ENST00000614526 LRRC4CQ9HCJ2 640 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 HESX1Q9UBX0 185 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 IP6K2Q9UHH9 426 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 Q9Y3F1 56 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 TLDC2A0PJX2 215 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 ARL5CA6NH57 179 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 CES2O00748 559 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 RNF40O75150 1001 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 PHF2O75151 1096 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 GABBR2O75899 941 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 BEST1O76090 585 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 SYF2O95926 243 aaKnown RBP3.62□□□□□ -1.83
LIG4-205ENST00000614526 INHAP05111 366 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 TUBBP07437 444 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 PFKMP08237 780 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 PAEPP09466 180 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 CTNNA2P26232 953 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 TKTP29401 623 aaKnown RBP3.62□□□□□ -1.83
LIG4-205ENST00000614526 RPL21P46778 160 aaKnown RBP3.62□□□□□ -1.83
LIG4-205ENST00000614526 NDUFV1P49821 464 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 TAF6P49848 677 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 BCAR1P56945 870 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms