RNA–Protein interactions for RNA: ENST00000614502.4

PDLIM2-218, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-218ENST00000614502 PI4K2AQ9BTU6 479 aa13.03□□□□□ -0.32
PDLIM2-218ENST00000614502 SLC46A2Q9BY10 475 aa13.03□□□□□ -0.32
PDLIM2-218ENST00000614502 MTMR12Q9C0I1 747 aa13.03□□□□□ -0.32
PDLIM2-218ENST00000614502 PARD6AQ9NPB6 346 aa13.03□□□□□ -0.32
PDLIM2-218ENST00000614502 EHD2Q9NZN4 543 aa13.03□□□□□ -0.32
PDLIM2-218ENST00000614502 CFAP45Q9UL16 551 aa13.03□□□□□ -0.32
PDLIM2-218ENST00000614502 PTPRDP23468 1912 aa13.02□□□□□ -0.32
PDLIM2-218ENST00000614502 GABRDO14764 452 aa13.02□□□□□ -0.33
PDLIM2-218ENST00000614502 F11P03951 625 aa13.02□□□□□ -0.33
PDLIM2-218ENST00000614502 FAM163BP0C2L3 166 aa13.02□□□□□ -0.33
PDLIM2-218ENST00000614502 HMGA1P17096 107 aaKnown RBP13.02□□□□□ -0.33
PDLIM2-218ENST00000614502 TGM1P22735 817 aa13.02□□□□□ -0.33
PDLIM2-218ENST00000614502 CNR2P34972 360 aa13.02□□□□□ -0.33
PDLIM2-218ENST00000614502 PDE6CP51160 858 aa13.02□□□□□ -0.33
PDLIM2-218ENST00000614502 NLRP12P59046 1061 aa13.02□□□□□ -0.33
PDLIM2-218ENST00000614502 ZNF268Q14587 947 aaPredicted RBP13.02□□□□□ -0.33
PDLIM2-218ENST00000614502 LPAL2Q16609 132 aa13.02□□□□□ -0.33
PDLIM2-218ENST00000614502 FOXD4L6Q3SYB3 417 aaPredicted RBP13.02□□□□□ -0.33
PDLIM2-218ENST00000614502 FOXD4L3Q6VB84 417 aaPredicted RBP13.02□□□□□ -0.33
PDLIM2-218ENST00000614502 UNC13DQ70J99 1090 aa13.02□□□□□ -0.33
PDLIM2-218ENST00000614502 MAB21L3Q8N8X9 362 aa13.02□□□□□ -0.33
PDLIM2-218ENST00000614502 ZSWIM2Q8NEG5 633 aa13.02□□□□□ -0.33
PDLIM2-218ENST00000614502 RSPRY1Q96DX4 576 aa13.02□□□□□ -0.33
PDLIM2-218ENST00000614502 HPDLQ96IR7 371 aa13.02□□□□□ -0.33
PDLIM2-218ENST00000614502 FNBP1Q96RU3 617 aa13.02□□□□□ -0.33
PDLIM2-218ENST00000614502 TDP1Q9NUW8 608 aa13.02□□□□□ -0.33
PDLIM2-218ENST00000614502 HSPBP1Q9NZL4 362 aa13.02□□□□□ -0.33
PDLIM2-218ENST00000614502 GMEB2Q9UKD1 530 aa13.02□□□□□ -0.33
PDLIM2-218ENST00000614502 CDH9Q9ULB4 789 aa13.02□□□□□ -0.33
PDLIM2-218ENST00000614502 MAGED2Q9UNF1 606 aaPredicted RBP13.02□□□□□ -0.33
PDLIM2-218ENST00000614502 HELZP42694 1942 aaKnown RBP13.01□□□□□ -0.33
PDLIM2-218ENST00000614502 SPAG17Q6Q759 2223 aa13.01□□□□□ -0.33
PDLIM2-218ENST00000614502 MAP1BP46821 2468 aaKnown RBP13.01□□□□□ -0.33
PDLIM2-218ENST00000614502 PVALEFA0A1B0GWK0 134 aa13.01□□□□□ -0.33
PDLIM2-218ENST00000614502 NOL4O94818 638 aa13.01□□□□□ -0.33
PDLIM2-218ENST00000614502 PAPSS2O95340 614 aaPredicted RBP13.01□□□□□ -0.33
PDLIM2-218ENST00000614502 MAGEA11P43364 429 aa13.01□□□□□ -0.33
PDLIM2-218ENST00000614502 ATXN1P54253 815 aaKnown RBP13.01□□□□□ -0.33
PDLIM2-218ENST00000614502 WNT7BP56706 349 aa13.01□□□□□ -0.33
PDLIM2-218ENST00000614502 DNM1Q05193 864 aaKnown RBP13.01□□□□□ -0.33
PDLIM2-218ENST00000614502 VSTM1Q6UX27 236 aa13.01□□□□□ -0.33
PDLIM2-218ENST00000614502 EPM2AIP1Q7L775 607 aaPredicted RBP13.01□□□□□ -0.33
PDLIM2-218ENST00000614502 MON1AQ86VX9 555 aa13.01□□□□□ -0.33
PDLIM2-218ENST00000614502 GPIHBP1Q8IV16 184 aa13.01□□□□□ -0.33
PDLIM2-218ENST00000614502 CXorf38Q8TB03 319 aa13.01□□□□□ -0.33
PDLIM2-218ENST00000614502 MYRFLQ96LU7 910 aa13.01□□□□□ -0.33
PDLIM2-218ENST00000614502 FGFBP2Q9BYJ0 223 aa13.01□□□□□ -0.33
PDLIM2-218ENST00000614502 TMLHEQ9NVH6 421 aa13.01□□□□□ -0.33
PDLIM2-218ENST00000614502 GTSE1Q9NYZ3 720 aa13.01□□□□□ -0.33
PDLIM2-218ENST00000614502 MAGEC2Q9UBF1 373 aaPredicted RBP13.01□□□□□ -0.33
PDLIM2-218ENST00000614502 SIX4Q9UIU6 781 aa13.01□□□□□ -0.33
PDLIM2-218ENST00000614502 RCOR1Q9UKL0 485 aa13.01□□□□□ -0.33
PDLIM2-218ENST00000614502 GTF3C4Q9UKN8 822 aa13.01□□□□□ -0.33
PDLIM2-218ENST00000614502 CNOT1A5YKK6 2376 aaKnown RBP13.01□□□□□ -0.33
PDLIM2-218ENST00000614502 POLR2DO15514 142 aaKnown RBP13□□□□□ -0.33
PDLIM2-218ENST00000614502 ATG13O75143 517 aa13□□□□□ -0.33
PDLIM2-218ENST00000614502 PRAMEF12O95522 483 aa13□□□□□ -0.33
PDLIM2-218ENST00000614502 USP17L7P0C7H9 530 aa13□□□□□ -0.33
PDLIM2-218ENST00000614502 PFKLP17858 780 aa13□□□□□ -0.33
PDLIM2-218ENST00000614502 TNNI1P19237 187 aa13□□□□□ -0.33
PDLIM2-218ENST00000614502 WARSP23381 471 aaKnown RBP13□□□□□ -0.33
PDLIM2-218ENST00000614502 ACAT1P24752 427 aaKnown RBP13□□□□□ -0.33
PDLIM2-218ENST00000614502 CYP2F1P24903 491 aa13□□□□□ -0.33
PDLIM2-218ENST00000614502 ANXA13P27216 316 aa13□□□□□ -0.33
PDLIM2-218ENST00000614502 HOXC13P31276 330 aa13□□□□□ -0.33
PDLIM2-218ENST00000614502 ME1P48163 572 aa13□□□□□ -0.33
PDLIM2-218ENST00000614502 FAM160A1Q05DH4 1040 aa13□□□□□ -0.33
PDLIM2-218ENST00000614502 DMWDQ09019 674 aa13□□□□□ -0.33
PDLIM2-218ENST00000614502 RUNX3Q13761 415 aa13□□□□□ -0.33
PDLIM2-218ENST00000614502 GAS6Q14393 721 aa13□□□□□ -0.33
PDLIM2-218ENST00000614502 PON2Q15165 354 aa13□□□□□ -0.33
PDLIM2-218ENST00000614502 PDGFRLQ15198 375 aa13□□□□□ -0.33
PDLIM2-218ENST00000614502 SNRNP35Q16560 246 aaKnown RBP13□□□□□ -0.33
PDLIM2-218ENST00000614502 SOWAHAQ2M3V2 549 aa13□□□□□ -0.33
PDLIM2-218ENST00000614502 WDR44Q5JSH3 913 aa13□□□□□ -0.33
PDLIM2-218ENST00000614502 FAM171BQ6P995 826 aa13□□□□□ -0.33
PDLIM2-218ENST00000614502 SHC4Q6S5L8 630 aa13□□□□□ -0.33
PDLIM2-218ENST00000614502 CBWD2Q8IUF1 395 aa13□□□□□ -0.33
PDLIM2-218ENST00000614502 CEP57L1Q8IYX8 460 aa13□□□□□ -0.33
PDLIM2-218ENST00000614502 XXYLT1Q8NBI6 393 aa13□□□□□ -0.33
PDLIM2-218ENST00000614502 ZFYVE19Q96K21 471 aa13□□□□□ -0.33
PDLIM2-218ENST00000614502 LRRC3BQ96PB8 259 aa13□□□□□ -0.33
PDLIM2-218ENST00000614502 PKMYT1Q99640 499 aa13□□□□□ -0.33
PDLIM2-218ENST00000614502 FAM83CQ9BQN1 747 aa13□□□□□ -0.33
PDLIM2-218ENST00000614502 SYT15Q9BQS2 421 aa13□□□□□ -0.33
PDLIM2-218ENST00000614502 AGPAT3Q9NRZ7 376 aa13□□□□□ -0.33
PDLIM2-218ENST00000614502 GKN1Q9NS71 199 aa13□□□□□ -0.33
PDLIM2-218ENST00000614502 TRAV19A0A0A6YYK7 116 aa12.99□□□□□ -0.33
PDLIM2-218ENST00000614502 PRR5-ARHGAP8B1AHC4 643 aa12.99□□□□□ -0.33
PDLIM2-218ENST00000614502 TRIM66O15016 1216 aa12.99□□□□□ -0.33
PDLIM2-218ENST00000614502 ATICP31939 592 aa12.99□□□□□ -0.33
PDLIM2-218ENST00000614502 SOX9P48436 509 aa12.99□□□□□ -0.33
PDLIM2-218ENST00000614502 PPP3CCP48454 512 aa12.99□□□□□ -0.33
PDLIM2-218ENST00000614502 CDR1P51861 262 aa12.99□□□□□ -0.33
PDLIM2-218ENST00000614502 TNNC1P63316 161 aa12.99□□□□□ -0.33
PDLIM2-218ENST00000614502 NUCB2P80303 420 aa12.99□□□□□ -0.33
PDLIM2-218ENST00000614502 ARHGAP8P85298 464 aa12.99□□□□□ -0.33
PDLIM2-218ENST00000614502 SATB1Q01826 763 aa12.99□□□□□ -0.33
PDLIM2-218ENST00000614502 GRSF1Q12849 480 aaKnown RBP eCLIP12.99□□□□□ -0.33
PDLIM2-218ENST00000614502 PSMD6Q15008 389 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms