RNA–Protein interactions for RNA: ENST00000614198.4

GGA3-221, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 3,438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-221ENST00000614198 THPOP40225 353 aa10.51□□□□□ -0.73
GGA3-221ENST00000614198 KCNJ2P63252 427 aa10.51□□□□□ -0.73
GGA3-221ENST00000614198 NOP14P78316 857 aaKnown RBP10.51□□□□□ -0.73
GGA3-221ENST00000614198 DPH6Q7L8W6 267 aa10.51□□□□□ -0.73
GGA3-221ENST00000614198 ERICH1Q86X53 443 aa10.51□□□□□ -0.73
GGA3-221ENST00000614198 MGARPQ8TDB4 240 aa10.51□□□□□ -0.73
GGA3-221ENST00000614198 TMEM174Q8WUU8 243 aa10.51□□□□□ -0.73
GGA3-221ENST00000614198 CPA5Q8WXQ8 436 aa10.51□□□□□ -0.73
GGA3-221ENST00000614198 CGRRF1Q99675 332 aa10.51□□□□□ -0.73
GGA3-221ENST00000614198 DDX47Q9H0S4 455 aaKnown RBP10.51□□□□□ -0.73
GGA3-221ENST00000614198 TMEM165Q9HC07 324 aa10.51□□□□□ -0.73
GGA3-221ENST00000614198 PRMT7Q9NVM4 692 aaPredicted RBP10.51□□□□□ -0.73
GGA3-221ENST00000614198 TMEM59LQ9UK28 342 aa10.51□□□□□ -0.73
GGA3-221ENST00000614198 ATP8A1Q9Y2Q0 1164 aa10.51□□□□□ -0.73
GGA3-221ENST00000614198 GAS2O43903 313 aaKnown RBP10.51□□□□□ -0.73
GGA3-221ENST00000614198 SMIM24O75264 130 aa10.51□□□□□ -0.73
GGA3-221ENST00000614198 DARSP14868 501 aaKnown RBP10.51□□□□□ -0.73
GGA3-221ENST00000614198 NCALDP61601 193 aa10.51□□□□□ -0.73
GGA3-221ENST00000614198 CLDN10P78369 228 aa10.51□□□□□ -0.73
GGA3-221ENST00000614198 LAMB3Q13751 1172 aa10.51□□□□□ -0.73
GGA3-221ENST00000614198 TRIM74Q86UV6 250 aa10.51□□□□□ -0.73
GGA3-221ENST00000614198 TRIM73Q86UV7 250 aa10.51□□□□□ -0.73
GGA3-221ENST00000614198 KLHL23Q8NBE8 558 aa10.51□□□□□ -0.73
GGA3-221ENST00000614198 RNF169Q8NCN4 708 aa10.51□□□□□ -0.73
GGA3-221ENST00000614198 EPS8L1Q8TE68 723 aa10.51□□□□□ -0.73
GGA3-221ENST00000614198 EZH1Q92800 747 aaPredicted RBP10.51□□□□□ -0.73
GGA3-221ENST00000614198 NAF1Q96HR8 494 aaKnown RBP10.51□□□□□ -0.73
GGA3-221ENST00000614198 NT5C1BQ96P26 610 aa10.51□□□□□ -0.73
GGA3-221ENST00000614198 ELAC2Q9BQ52 826 aaKnown RBP10.51□□□□□ -0.73
GGA3-221ENST00000614198 RPF1Q9H9Y2 349 aaKnown RBP10.51□□□□□ -0.73
GGA3-221ENST00000614198 SAMD15Q9P1V8 674 aa10.51□□□□□ -0.73
GGA3-221ENST00000614198 GTF2IRD1Q9UHL9 959 aa10.51□□□□□ -0.73
GGA3-221ENST00000614198 FBXL5Q9UKA1 691 aa10.51□□□□□ -0.73
GGA3-221ENST00000614198 COQ4Q9Y3A0 265 aa10.51□□□□□ -0.73
GGA3-221ENST00000614198 CDY2AQ9Y6F7 541 aa10.51□□□□□ -0.73
GGA3-221ENST00000614198 SCN10AQ9Y5Y9 1956 aa10.5□□□□□ -0.73
GGA3-221ENST00000614198 DPPA5A6NC42 116 aa10.5□□□□□ -0.73
GGA3-221ENST00000614198 ATP2A2P16615 1042 aaKnown RBP10.5□□□□□ -0.73
GGA3-221ENST00000614198 DHX9Q08211 1270 aaKnown RBP10.5□□□□□ -0.73
GGA3-221ENST00000614198 CETN1Q12798 172 aa10.5□□□□□ -0.73
GGA3-221ENST00000614198 RPS6KA1Q15418 735 aa10.5□□□□□ -0.73
GGA3-221ENST00000614198 CCDC142Q17RM4 750 aa10.5□□□□□ -0.73
GGA3-221ENST00000614198 WDR72Q3MJ13 1102 aa10.5□□□□□ -0.73
GGA3-221ENST00000614198 CCSAPQ6IQ19 270 aaPredicted RBP10.5□□□□□ -0.73
GGA3-221ENST00000614198 USP38Q8NB14 1042 aa10.5□□□□□ -0.73
GGA3-221ENST00000614198 ZSWIM1Q9BR11 485 aa10.5□□□□□ -0.73
GGA3-221ENST00000614198 TRIM7Q9C029 511 aa10.5□□□□□ -0.73
GGA3-221ENST00000614198 CITO14578 2027 aa10.5□□□□□ -0.73
GGA3-221ENST00000614198 TMEM191BP0C7N4 346 aa10.5□□□□□ -0.73
GGA3-221ENST00000614198 RARAP10276 462 aa10.5□□□□□ -0.73
GGA3-221ENST00000614198 GALCP54803 685 aa10.5□□□□□ -0.73
GGA3-221ENST00000614198 SNRPFP62306 86 aaKnown RBP10.5□□□□□ -0.73
GGA3-221ENST00000614198 TAF11Q15544 211 aa10.5□□□□□ -0.73
GGA3-221ENST00000614198 LHX8Q68G74 356 aa10.5□□□□□ -0.73
GGA3-221ENST00000614198 KCNV2Q8TDN2 545 aa10.5□□□□□ -0.73
GGA3-221ENST00000614198 SYT11Q9BT88 431 aa10.5□□□□□ -0.73
GGA3-221ENST00000614198 SDCBP2Q9H190 292 aa10.5□□□□□ -0.73
GGA3-221ENST00000614198 SMIM35A0A1B0GVV1 85 aa10.49□□□□□ -0.73
GGA3-221ENST00000614198 PIK3R2O00459 728 aa10.49□□□□□ -0.73
GGA3-221ENST00000614198 MAPK13O15264 365 aa10.49□□□□□ -0.73
GGA3-221ENST00000614198 SART1O43290 800 aaKnown RBP10.49□□□□□ -0.73
GGA3-221ENST00000614198 CYP11B1P15538 503 aa10.49□□□□□ -0.73
GGA3-221ENST00000614198 POLR2BP30876 1174 aaKnown RBP10.49□□□□□ -0.73
GGA3-221ENST00000614198 FAM71AQ8IYT1 594 aa10.49□□□□□ -0.73
GGA3-221ENST00000614198 TWNKQ96RR1 684 aa10.49□□□□□ -0.73
GGA3-221ENST00000614198 MTG1Q9BT17 334 aaPredicted RBP10.49□□□□□ -0.73
GGA3-221ENST00000614198 GCOM2Q9BZD3 368 aaPredicted RBP10.49□□□□□ -0.73
GGA3-221ENST00000614198 UNC93B1Q9H1C4 597 aa10.49□□□□□ -0.73
GGA3-221ENST00000614198 SMYD3Q9H7B4 428 aa10.49□□□□□ -0.73
GGA3-221ENST00000614198 NOCTQ9UK39 431 aaKnown RBP10.49□□□□□ -0.73
GGA3-221ENST00000614198 COG5Q9UP83 839 aa10.49□□□□□ -0.73
GGA3-221ENST00000614198 COL1A2P08123 1366 aa10.49□□□□□ -0.73
GGA3-221ENST00000614198 THSD7BQ9C0I4 1608 aa10.49□□□□□ -0.73
GGA3-221ENST00000614198 RRN3P2A6NIE6 340 aa10.49□□□□□ -0.73
GGA3-221ENST00000614198 LDHAP00338 332 aaKnown RBP10.49□□□□□ -0.73
GGA3-221ENST00000614198 SLCO1A2P46721 670 aa10.49□□□□□ -0.73
GGA3-221ENST00000614198 ATN1P54259 1190 aaPredicted RBP10.49□□□□□ -0.73
GGA3-221ENST00000614198 FMO1Q01740 532 aa10.49□□□□□ -0.73
GGA3-221ENST00000614198 ZNF618Q5T7W0 954 aa10.49□□□□□ -0.73
GGA3-221ENST00000614198 MEI1Q5TIA1 1274 aa10.49□□□□□ -0.73
GGA3-221ENST00000614198 SHC3Q92529 594 aa10.49□□□□□ -0.73
GGA3-221ENST00000614198 PRCCQ92733 491 aaPredicted RBP10.49□□□□□ -0.73
GGA3-221ENST00000614198 KIF12Q96FN5 646 aa10.49□□□□□ -0.73
GGA3-221ENST00000614198 AGPAT1Q99943 283 aa10.49□□□□□ -0.73
GGA3-221ENST00000614198 EDEM3Q9BZQ6 932 aa10.49□□□□□ -0.73
GGA3-221ENST00000614198 XYLT2Q9H1B5 865 aa10.49□□□□□ -0.73
GGA3-221ENST00000614198 C1orf112Q9NSG2 853 aa10.49□□□□□ -0.73
GGA3-221ENST00000614198 PARP2Q9UGN5 583 aa10.49□□□□□ -0.73
GGA3-221ENST00000614198 PCDHB4Q9Y5E5 795 aa10.49□□□□□ -0.73
GGA3-221ENST00000614198 SSU72P8A0A1W2PR75 194 aa10.49□□□□□ -0.73
GGA3-221ENST00000614198 LRRD1A4D1F6 860 aa10.49□□□□□ -0.73
GGA3-221ENST00000614198 KRIT1O00522 736 aa10.49□□□□□ -0.73
GGA3-221ENST00000614198 MGEA5O60502 916 aa10.49□□□□□ -0.73
GGA3-221ENST00000614198 HMGCRP04035 888 aa10.49□□□□□ -0.73
GGA3-221ENST00000614198 ACO1P21399 889 aaKnown RBP10.49□□□□□ -0.73
GGA3-221ENST00000614198 CD52P31358 61 aa10.49□□□□□ -0.73
GGA3-221ENST00000614198 ACLYP53396 1101 aa10.49□□□□□ -0.73
GGA3-221ENST00000614198 SOX4Q06945 474 aaPredicted RBP10.49□□□□□ -0.73
GGA3-221ENST00000614198 DUOXA2Q1HG44 320 aa10.49□□□□□ -0.73
GGA3-221ENST00000614198 GALNTL6Q49A17 601 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms