RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 SLC2A14Q8TDB8 520 aa15.6■□□□□ 0.09
CD48-203ENST00000613788 PPP2R3CQ969Q6 453 aa15.6■□□□□ 0.09
CD48-203ENST00000613788 MYLPFQ96A32 169 aa15.6■□□□□ 0.09
CD48-203ENST00000613788 B3GNT5Q9BYG0 378 aa15.6■□□□□ 0.09
CD48-203ENST00000613788 TTYH1Q9H313 450 aaPredicted RBP15.6■□□□□ 0.09
CD48-203ENST00000613788 HAUS4Q9H6D7 363 aa15.6■□□□□ 0.09
CD48-203ENST00000613788 TMLHEQ9NVH6 421 aa15.6■□□□□ 0.09
CD48-203ENST00000613788 LMCD1Q9NZU5 365 aa15.6■□□□□ 0.09
CD48-203ENST00000613788 AFF4Q9UHB7 1163 aaKnown RBP15.6■□□□□ 0.09
CD48-203ENST00000613788 CHD9Q3L8U1 2897 aa15.59■□□□□ 0.09
CD48-203ENST00000613788 WDR27A2RRH5 827 aa15.59■□□□□ 0.09
CD48-203ENST00000613788 SOX1O00570 391 aaPredicted RBP15.59■□□□□ 0.09
CD48-203ENST00000613788 CALCAP01258 141 aa15.59■□□□□ 0.09
CD48-203ENST00000613788 SKILP12757 684 aa15.59■□□□□ 0.09
CD48-203ENST00000613788 CCDC130P13994 396 aa15.59■□□□□ 0.09
CD48-203ENST00000613788 ATF2P15336 505 aa15.59■□□□□ 0.09
CD48-203ENST00000613788 SLC8A3P57103 927 aa15.59■□□□□ 0.09
CD48-203ENST00000613788 CDK17Q00537 523 aa15.59■□□□□ 0.09
CD48-203ENST00000613788 CDR2Q01850 454 aa15.59■□□□□ 0.09
CD48-203ENST00000613788 MEA1Q16626 185 aa15.59■□□□□ 0.09
CD48-203ENST00000613788 CFAP221Q4G0U5 840 aa15.59■□□□□ 0.09
CD48-203ENST00000613788 WDR59Q6PJI9 974 aa15.59■□□□□ 0.09
CD48-203ENST00000613788 RNF19BQ6ZMZ0 732 aa15.59■□□□□ 0.09
CD48-203ENST00000613788 NOP9Q86U38 636 aaKnown RBP15.59■□□□□ 0.09
CD48-203ENST00000613788 VPS36Q86VN1 386 aa15.59■□□□□ 0.09
CD48-203ENST00000613788 PALB2Q86YC2 1186 aa15.59■□□□□ 0.09
CD48-203ENST00000613788 FUKQ8N0W3 1084 aa15.59■□□□□ 0.09
CD48-203ENST00000613788 ANKRD52Q8NB46 1076 aa15.59■□□□□ 0.09
CD48-203ENST00000613788 AGPAT1Q99943 283 aa15.59■□□□□ 0.09
CD48-203ENST00000613788 PRDM12Q9H4Q4 367 aa15.59■□□□□ 0.09
CD48-203ENST00000613788 ABCB6Q9NP58 842 aa15.59■□□□□ 0.09
CD48-203ENST00000613788 HSFX1Q9UBD0 423 aa15.59■□□□□ 0.09
CD48-203ENST00000613788 NOCTQ9UK39 431 aaKnown RBP15.59■□□□□ 0.09
CD48-203ENST00000613788 TSPAN16Q9UKR8 245 aa15.59■□□□□ 0.09
CD48-203ENST00000613788 PCDHGC3Q9UN70 934 aa15.59■□□□□ 0.09
CD48-203ENST00000613788 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.59■□□□□ 0.09
CD48-203ENST00000613788 MTMR11A4FU01 709 aa15.58■□□□□ 0.09
CD48-203ENST00000613788 PTMAP06454 111 aaKnown RBP15.58■□□□□ 0.09
CD48-203ENST00000613788 TNFAIP3P21580 790 aa15.58■□□□□ 0.09
CD48-203ENST00000613788 ADORA2BP29275 332 aa15.58■□□□□ 0.09
CD48-203ENST00000613788 ELF1P32519 619 aa15.58■□□□□ 0.09
CD48-203ENST00000613788 ADCY1Q08828 1119 aa15.58■□□□□ 0.09
CD48-203ENST00000613788 GOLGA7BQ2TAP0 167 aa15.58■□□□□ 0.09
CD48-203ENST00000613788 TAF3Q5VWG9 929 aa15.58■□□□□ 0.09
CD48-203ENST00000613788 HGSNATQ68CP4 663 aa15.58■□□□□ 0.09
CD48-203ENST00000613788 GPR153Q6NV75 609 aa15.58■□□□□ 0.09
CD48-203ENST00000613788 VSTM1Q6UX27 236 aa15.58■□□□□ 0.09
CD48-203ENST00000613788 DDX1Q92499 740 aaKnown RBP15.58■□□□□ 0.09
CD48-203ENST00000613788 SMARCD1Q96GM5 515 aa15.58■□□□□ 0.09
CD48-203ENST00000613788 LRCH3Q96II8 777 aa15.58■□□□□ 0.09
CD48-203ENST00000613788 PGLYRP2Q96PD5 576 aa15.58■□□□□ 0.09
CD48-203ENST00000613788 ZSWIM1Q9BR11 485 aa15.58■□□□□ 0.09
CD48-203ENST00000613788 TLE6Q9H808 572 aa15.58■□□□□ 0.09
CD48-203ENST00000613788 ABI2Q9NYB9 513 aaPredicted RBP15.58■□□□□ 0.09
CD48-203ENST00000613788 CEP83Q9Y592 693 aa15.58■□□□□ 0.09
CD48-203ENST00000613788 PCDHGC5Q9Y5F6 944 aa15.58■□□□□ 0.09
CD48-203ENST00000613788 CLDN5O00501 218 aa15.58■□□□□ 0.08
CD48-203ENST00000613788 MICAL2O94851 1124 aa15.58■□□□□ 0.08
CD48-203ENST00000613788 MMEP08473 750 aa15.58■□□□□ 0.08
CD48-203ENST00000613788 FAM200BP0CF97 657 aa15.58■□□□□ 0.08
CD48-203ENST00000613788 BDNFP23560 247 aa15.58■□□□□ 0.08
CD48-203ENST00000613788 ANXA13P27216 316 aa15.58■□□□□ 0.08
CD48-203ENST00000613788 MAGEA11P43364 429 aa15.58■□□□□ 0.08
CD48-203ENST00000613788 TUFMP49411 452 aaKnown RBP15.58■□□□□ 0.08
CD48-203ENST00000613788 BCAT1P54687 386 aa15.58■□□□□ 0.08
CD48-203ENST00000613788 GRIN2CQ14957 1233 aa15.58■□□□□ 0.08
CD48-203ENST00000613788 CCDC142Q17RM4 750 aa15.58■□□□□ 0.08
CD48-203ENST00000613788 CYP26C1Q6V0L0 522 aa15.58■□□□□ 0.08
CD48-203ENST00000613788 TRIM72Q6ZMU5 477 aa15.58■□□□□ 0.08
CD48-203ENST00000613788 PAQR9Q6ZVX9 377 aa15.58■□□□□ 0.08
CD48-203ENST00000613788 FAM35AQ86V20 835 aa15.58■□□□□ 0.08
CD48-203ENST00000613788 ATAD1Q8NBU5 361 aa15.58■□□□□ 0.08
CD48-203ENST00000613788 SLC20A1Q8WUM9 679 aa15.58■□□□□ 0.08
CD48-203ENST00000613788 PPP1R9BQ96SB3 815 aa15.58■□□□□ 0.08
CD48-203ENST00000613788 CDCA3Q99618 268 aaPredicted RBP15.58■□□□□ 0.08
CD48-203ENST00000613788 DUSP16Q9BY84 665 aa15.58■□□□□ 0.08
CD48-203ENST00000613788 ZNF518BQ9C0D4 1074 aa15.58■□□□□ 0.08
CD48-203ENST00000613788 LHX5Q9H2C1 402 aa15.58■□□□□ 0.08
CD48-203ENST00000613788 ARHGAP20Q9P2F6 1191 aa15.58■□□□□ 0.08
CD48-203ENST00000613788 DPP7Q9UHL4 492 aa15.58■□□□□ 0.08
CD48-203ENST00000613788 CHD7Q9P2D1 2997 aa15.57■□□□□ 0.08
CD48-203ENST00000613788 SSU72P8A0A1W2PR75 194 aa15.57■□□□□ 0.08
CD48-203ENST00000613788 M0QYV0 167 aa15.57■□□□□ 0.08
CD48-203ENST00000613788 TGM5O43548 720 aa15.57■□□□□ 0.08
CD48-203ENST00000613788 NRDCO43847 1150 aa15.57■□□□□ 0.08
CD48-203ENST00000613788 CLASP2O75122 1294 aaKnown RBP15.57■□□□□ 0.08
CD48-203ENST00000613788 AP1G2O75843 785 aa15.57■□□□□ 0.08
CD48-203ENST00000613788 GLUD1P00367 558 aa15.57■□□□□ 0.08
CD48-203ENST00000613788 DUSP4Q13115 394 aa15.57■□□□□ 0.08
CD48-203ENST00000613788 MAPK8IP2Q13387 824 aaPredicted RBP15.57■□□□□ 0.08
CD48-203ENST00000613788 HABP4Q5JVS0 413 aaKnown RBP15.57■□□□□ 0.08
CD48-203ENST00000613788 LILRA6Q6PI73 481 aa15.57■□□□□ 0.08
CD48-203ENST00000613788 ZNF571Q7Z3V5 609 aaPredicted RBP15.57■□□□□ 0.08
CD48-203ENST00000613788 TMTC1Q8IUR5 882 aa15.57■□□□□ 0.08
CD48-203ENST00000613788 CCDC42Q96M95 316 aa15.57■□□□□ 0.08
CD48-203ENST00000613788 BAG1Q99933 345 aaPredicted RBP15.57■□□□□ 0.08
CD48-203ENST00000613788 DEF6Q9H4E7 631 aa15.57■□□□□ 0.08
CD48-203ENST00000613788 NSUN3Q9H649 340 aaKnown RBP15.57■□□□□ 0.08
CD48-203ENST00000613788 CYP4F11Q9HBI6 524 aa15.57■□□□□ 0.08
CD48-203ENST00000613788 SEPT11Q9NVA2 429 aaKnown RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms